RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 ZNF486Q96H40 463 aaPredicted RBP23.4■■□□□ 1.34
CPNE1-202ENST00000352393 C3orf14Q9HBI5 128 aa23.4■■□□□ 1.34
CPNE1-202ENST00000352393 NDOR1Q9UHB4 597 aa23.4■■□□□ 1.34
CPNE1-202ENST00000352393 CCL26Q9Y258 94 aa23.4■■□□□ 1.34
CPNE1-202ENST00000352393 SNX8Q9Y5X2 465 aa23.4■■□□□ 1.34
CPNE1-202ENST00000352393 CCDC88CQ9P219 2028 aa23.4■■□□□ 1.34
CPNE1-202ENST00000352393 TTC36A6NLP5 189 aa23.39■■□□□ 1.34
CPNE1-202ENST00000352393 H3BM21 787 aa23.39■■□□□ 1.34
CPNE1-202ENST00000352393 H3BQ06 376 aaPredicted RBP23.39■■□□□ 1.34
CPNE1-202ENST00000352393 PQBP1O60828 265 aaKnown RBP23.39■■□□□ 1.34
CPNE1-202ENST00000352393 ADAP00813 363 aa23.39■■□□□ 1.34
CPNE1-202ENST00000352393 PTPN2P17706 415 aa23.39■■□□□ 1.34
CPNE1-202ENST00000352393 RCVRNP35243 200 aa23.39■■□□□ 1.34
CPNE1-202ENST00000352393 LIM2P55344 173 aa23.39■■□□□ 1.34
CPNE1-202ENST00000352393 SNRPGP62308 76 aaKnown RBP23.39■■□□□ 1.34
CPNE1-202ENST00000352393 DUSP7Q16829 419 aa23.39■■□□□ 1.34
CPNE1-202ENST00000352393 CLIP4Q8N3C7 705 aa23.39■■□□□ 1.34
CPNE1-202ENST00000352393 FLCNQ8NFG4 579 aa23.39■■□□□ 1.34
CPNE1-202ENST00000352393 CD99L2Q8TCZ2 262 aa23.39■■□□□ 1.34
CPNE1-202ENST00000352393 NPAP1Q9NZP6 1156 aa23.39■■□□□ 1.34
CPNE1-202ENST00000352393 REV1Q9UBZ9 1251 aa23.39■■□□□ 1.34
CPNE1-202ENST00000352393 TBC1D24Q9ULP9 559 aa23.39■■□□□ 1.34
CPNE1-202ENST00000352393 TRBV4-1A0A0J9YWV2 114 aa23.39■■□□□ 1.33
CPNE1-202ENST00000352393 PDZK1P1A8MUH7 402 aa23.39■■□□□ 1.33
CPNE1-202ENST00000352393 ENTPD6O75354 484 aa23.39■■□□□ 1.33
CPNE1-202ENST00000352393 IL3P08700 152 aa23.39■■□□□ 1.33
CPNE1-202ENST00000352393 CD72P21854 359 aa23.39■■□□□ 1.33
CPNE1-202ENST00000352393 ARSIQ5FYB1 569 aa23.39■■□□□ 1.33
CPNE1-202ENST00000352393 TMEM201Q5SNT2 666 aa23.39■■□□□ 1.33
CPNE1-202ENST00000352393 IKBIPQ70UQ0 350 aa23.39■■□□□ 1.33
CPNE1-202ENST00000352393 SLC7A5P1Q8MH63 180 aa23.39■■□□□ 1.33
CPNE1-202ENST00000352393 CEP19Q96LK0 163 aa23.39■■□□□ 1.33
CPNE1-202ENST00000352393 C11orf16Q9NQ32 467 aa23.39■■□□□ 1.33
CPNE1-202ENST00000352393 C14orf119Q9NWQ9 140 aa23.39■■□□□ 1.33
CPNE1-202ENST00000352393 TLR4O00206 839 aa23.38■■□□□ 1.33
CPNE1-202ENST00000352393 KLK1P06870 262 aa23.38■■□□□ 1.33
CPNE1-202ENST00000352393 POU1F1P28069 291 aa23.38■■□□□ 1.33
CPNE1-202ENST00000352393 HOXD10P28358 340 aa23.38■■□□□ 1.33
CPNE1-202ENST00000352393 TNFSF8P32971 234 aa23.38■■□□□ 1.33
CPNE1-202ENST00000352393 TIE1P35590 1138 aa23.38■■□□□ 1.33
CPNE1-202ENST00000352393 REEP3Q6NUK4 255 aa23.38■■□□□ 1.33
CPNE1-202ENST00000352393 TMC5Q6UXY8 1006 aa23.38■■□□□ 1.33
CPNE1-202ENST00000352393 LMNTD1Q8N9Z9 388 aa23.38■■□□□ 1.33
CPNE1-202ENST00000352393 PDXPQ96GD0 296 aa23.38■■□□□ 1.33
CPNE1-202ENST00000352393 TAAR2Q9P1P5 351 aa23.38■■□□□ 1.33
CPNE1-202ENST00000352393 SLITRK5O94991 958 aa23.38■■□□□ 1.33
CPNE1-202ENST00000352393 CTSLP07711 333 aa23.38■■□□□ 1.33
CPNE1-202ENST00000352393 UQCRC2P22695 453 aa23.38■■□□□ 1.33
CPNE1-202ENST00000352393 MEF2AQ02078 507 aaPredicted RBP23.38■■□□□ 1.33
CPNE1-202ENST00000352393 TSTA3Q13630 321 aaPredicted RBP23.38■■□□□ 1.33
CPNE1-202ENST00000352393 LEXMQ3ZCV2 418 aa23.38■■□□□ 1.33
CPNE1-202ENST00000352393 SLX4IPQ5VYV7 408 aa23.38■■□□□ 1.33
CPNE1-202ENST00000352393 HIST2H2AA3Q6FI13 130 aa23.38■■□□□ 1.33
CPNE1-202ENST00000352393 LRRC56Q8IYG6 542 aaPredicted RBP23.38■■□□□ 1.33
CPNE1-202ENST00000352393 MMP21Q8N119 569 aa23.38■■□□□ 1.33
CPNE1-202ENST00000352393 OR2A14Q96R47 310 aa23.38■■□□□ 1.33
CPNE1-202ENST00000352393 ASPNQ9BXN1 380 aa23.38■■□□□ 1.33
CPNE1-202ENST00000352393 SLC6A16Q9GZN6 736 aa23.38■■□□□ 1.33
CPNE1-202ENST00000352393 CXorf36Q9H7Y0 433 aa23.38■■□□□ 1.33
CPNE1-202ENST00000352393 ERVK13-1Q9NX77 482 aa23.38■■□□□ 1.33
CPNE1-202ENST00000352393 ICKQ9UPZ9 632 aa23.38■■□□□ 1.33
CPNE1-202ENST00000352393 OSMP13725 252 aa23.37■■□□□ 1.33
CPNE1-202ENST00000352393 CSTF2P33240 577 aaKnown RBP eCLIP23.37■■□□□ 1.332e-45■■■■■ 66.1
CPNE1-202ENST00000352393 DGKEP52429 567 aa23.37■■□□□ 1.33
CPNE1-202ENST00000352393 LRRC26Q2I0M4 334 aa23.37■■□□□ 1.33
CPNE1-202ENST00000352393 MEDAGQ5VYS4 303 aa23.37■■□□□ 1.33
CPNE1-202ENST00000352393 TMEM215Q68D42 235 aa23.37■■□□□ 1.33
CPNE1-202ENST00000352393 NXPE4Q6UWF7 544 aa23.37■■□□□ 1.33
CPNE1-202ENST00000352393 KRT73Q86Y46 540 aa23.37■■□□□ 1.33
CPNE1-202ENST00000352393 Q8N9G6 341 aaPredicted RBP23.37■■□□□ 1.33
CPNE1-202ENST00000352393 ST13P5Q8NFI4 369 aaPredicted RBP23.37■■□□□ 1.33
CPNE1-202ENST00000352393 SLC5A11Q8WWX8 675 aa23.37■■□□□ 1.33
CPNE1-202ENST00000352393 AP2M1Q96CW1 435 aa23.37■■□□□ 1.33
CPNE1-202ENST00000352393 IL4I1Q96RQ9 567 aa23.37■■□□□ 1.33
CPNE1-202ENST00000352393 BARHL1Q9BZE3 327 aa23.37■■□□□ 1.33
CPNE1-202ENST00000352393 UCK2Q9BZX2 261 aa23.37■■□□□ 1.33
CPNE1-202ENST00000352393 NEK6Q9HC98 313 aa23.37■■□□□ 1.33
CPNE1-202ENST00000352393 DYRK4Q9NR20 520 aa23.37■■□□□ 1.33
CPNE1-202ENST00000352393 NUP210Q8TEM1 1887 aaPredicted RBP23.37■■□□□ 1.33
CPNE1-202ENST00000352393 RGS13O14921 159 aa23.36■■□□□ 1.33
CPNE1-202ENST00000352393 TGM5O43548 720 aa23.36■■□□□ 1.33
CPNE1-202ENST00000352393 LRG1P02750 347 aa23.36■■□□□ 1.33
CPNE1-202ENST00000352393 MMP12P39900 470 aa23.36■■□□□ 1.33
CPNE1-202ENST00000352393 RPS26P11Q5JNZ5 115 aaPredicted RBP23.36■■□□□ 1.33
CPNE1-202ENST00000352393 SETD6Q8TBK2 473 aa23.36■■□□□ 1.33
CPNE1-202ENST00000352393 TMCO6Q96DC7 493 aa23.36■■□□□ 1.33
CPNE1-202ENST00000352393 RACGAP1Q9H0H5 632 aa23.36■■□□□ 1.33
CPNE1-202ENST00000352393 PLXND1Q9Y4D7 1925 aa23.36■■□□□ 1.33
CPNE1-202ENST00000352393 CSO75390 466 aaKnown RBP23.36■■□□□ 1.33
CPNE1-202ENST00000352393 CCNKO75909 580 aa23.36■■□□□ 1.33
CPNE1-202ENST00000352393 SOX3P41225 446 aa23.36■■□□□ 1.33
CPNE1-202ENST00000352393 ATN1P54259 1190 aaPredicted RBP23.36■■□□□ 1.33
CPNE1-202ENST00000352393 FOXD4Q12950 439 aaPredicted RBP23.36■■□□□ 1.33
CPNE1-202ENST00000352393 C1QTNF12Q5T7M4 302 aa23.36■■□□□ 1.33
CPNE1-202ENST00000352393 RSBN1Q5VWQ0 802 aaPredicted RBP23.36■■□□□ 1.33
CPNE1-202ENST00000352393 C12orf73Q69YU5 71 aa23.36■■□□□ 1.33
CPNE1-202ENST00000352393 ERAP2Q6P179 960 aa23.36■■□□□ 1.33
CPNE1-202ENST00000352393 GDPGP1Q6ZNW5 385 aa23.36■■□□□ 1.33
CPNE1-202ENST00000352393 FAM92BQ6ZTR7 304 aa23.36■■□□□ 1.33
CPNE1-202ENST00000352393 GPR32P1Q8NGA4 272 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms