RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 EEDO75530 441 aaKnown RBP20.7■□□□□ 0.9
SNX3-202ENST00000349379 PDYNP01213 254 aa20.7■□□□□ 0.9
SNX3-202ENST00000349379 CPA3P15088 417 aa20.7■□□□□ 0.9
SNX3-202ENST00000349379 PKNOX1P55347 436 aa20.7■□□□□ 0.9
SNX3-202ENST00000349379 ACTN3Q08043 901 aaPredicted RBP20.7■□□□□ 0.9
SNX3-202ENST00000349379 COLEC12Q5KU26 742 aa20.7■□□□□ 0.9
SNX3-202ENST00000349379 Q6ZS92 163 aa20.7■□□□□ 0.9
SNX3-202ENST00000349379 NFAM1Q8NET5 270 aaPredicted RBP20.7■□□□□ 0.9
SNX3-202ENST00000349379 AGAP11Q8TF27 550 aa20.7■□□□□ 0.9
SNX3-202ENST00000349379 SELENOMQ8WWX9 145 aa20.7■□□□□ 0.9
SNX3-202ENST00000349379 SPACA6W5XKT8 324 aa20.7■□□□□ 0.9
SNX3-202ENST00000349379 SYNDIG1LA6NDD5 238 aa20.69■□□□□ 0.9
SNX3-202ENST00000349379 UBFD1O14562 309 aaKnown RBP20.69■□□□□ 0.9
SNX3-202ENST00000349379 TMPRSS11DO60235 418 aa20.69■□□□□ 0.9
SNX3-202ENST00000349379 ESRRBO95718 433 aa20.69■□□□□ 0.9
SNX3-202ENST00000349379 HNRNPH2P55795 449 aaKnown RBP20.69■□□□□ 0.9
SNX3-202ENST00000349379 SLC13A2Q13183 592 aa20.69■□□□□ 0.9
SNX3-202ENST00000349379 PCLAFQ15004 111 aa20.69■□□□□ 0.9
SNX3-202ENST00000349379 TERF2Q15554 542 aa20.69■□□□□ 0.9
SNX3-202ENST00000349379 TCHHL1Q5QJ38 904 aaPredicted RBP20.69■□□□□ 0.9
SNX3-202ENST00000349379 LIPMQ5VYY2 423 aa20.69■□□□□ 0.9
SNX3-202ENST00000349379 FRMD7Q6ZUT3 714 aa20.69■□□□□ 0.9
SNX3-202ENST00000349379 NUDT13Q86X67 352 aa20.69■□□□□ 0.9
SNX3-202ENST00000349379 ZADH2Q8N4Q0 377 aa20.69■□□□□ 0.9
SNX3-202ENST00000349379 SIRT6Q8N6T7 355 aa20.69■□□□□ 0.9
SNX3-202ENST00000349379 CDYL2Q8N8U2 506 aa20.69■□□□□ 0.9
SNX3-202ENST00000349379 ELP5Q8TE02 316 aa20.69■□□□□ 0.9
SNX3-202ENST00000349379 LYARQ9NX58 379 aaKnown RBP20.69■□□□□ 0.9
SNX3-202ENST00000349379 MS4A12Q9NXJ0 267 aa20.69■□□□□ 0.9
SNX3-202ENST00000349379 PTGFRNQ9P2B2 879 aa20.69■□□□□ 0.9
SNX3-202ENST00000349379 PHF11Q9UIL8 331 aa20.69■□□□□ 0.9
SNX3-202ENST00000349379 ADAM29Q9UKF5 820 aa20.69■□□□□ 0.9
SNX3-202ENST00000349379 FBXW2Q9UKT8 454 aa20.69■□□□□ 0.9
SNX3-202ENST00000349379 PPIEQ9UNP9 301 aaKnown RBP20.69■□□□□ 0.9
SNX3-202ENST00000349379 ASB4Q9Y574 426 aa20.69■□□□□ 0.9
SNX3-202ENST00000349379 MANBAO00462 879 aa20.68■□□□□ 0.9
SNX3-202ENST00000349379 ENO1P06733 434 aaKnown RBP20.68■□□□□ 0.9
SNX3-202ENST00000349379 HSD3B1P14060 373 aa20.68■□□□□ 0.9
SNX3-202ENST00000349379 CPN2P22792 545 aa20.68■□□□□ 0.9
SNX3-202ENST00000349379 HSD3B2P26439 372 aa20.68■□□□□ 0.9
SNX3-202ENST00000349379 NAGLUP54802 743 aa20.68■□□□□ 0.9
SNX3-202ENST00000349379 TNFRSF17Q02223 184 aa20.68■□□□□ 0.9
SNX3-202ENST00000349379 TLE1Q04724 770 aa20.68■□□□□ 0.9
SNX3-202ENST00000349379 KRT71Q3SY84 523 aa20.68■□□□□ 0.9
SNX3-202ENST00000349379 B3GNTL1Q67FW5 361 aaPredicted RBP20.68■□□□□ 0.9
SNX3-202ENST00000349379 GPR180Q86V85 440 aa20.68■□□□□ 0.9
SNX3-202ENST00000349379 METTL4Q8N3J2 472 aa20.68■□□□□ 0.9
SNX3-202ENST00000349379 CCNYL1Q8N7R7 359 aa20.68■□□□□ 0.9
SNX3-202ENST00000349379 CCDC63Q8NA47 563 aa20.68■□□□□ 0.9
SNX3-202ENST00000349379 MFRPQ9BY79 579 aa20.68■□□□□ 0.9
SNX3-202ENST00000349379 EPS8L2Q9H6S3 715 aa20.68■□□□□ 0.9
SNX3-202ENST00000349379 B3GNT3Q9Y2A9 372 aa20.68■□□□□ 0.9
SNX3-202ENST00000349379 ATG4BQ9Y4P1 393 aa20.68■□□□□ 0.9
SNX3-202ENST00000349379 CSAG2Q9Y5P2 127 aa20.68■□□□□ 0.9
SNX3-202ENST00000349379 CROCCQ5TZA2 2017 aa20.67■□□□□ 0.9
SNX3-202ENST00000349379 H3BQF6 201 aa20.67■□□□□ 0.9
SNX3-202ENST00000349379 KRT6AP02538 564 aa20.67■□□□□ 0.9
SNX3-202ENST00000349379 KRT6BP04259 564 aa20.67■□□□□ 0.9
SNX3-202ENST00000349379 CREB1P16220 341 aa20.67■□□□□ 0.9
SNX3-202ENST00000349379 KRT6CP48668 564 aa20.67■□□□□ 0.9
SNX3-202ENST00000349379 IGLV3-21P80748 117 aaPredicted RBP20.67■□□□□ 0.9
SNX3-202ENST00000349379 ZNF33BQ06732 778 aa20.67■□□□□ 0.9
SNX3-202ENST00000349379 SGO1Q5FBB7 561 aa20.67■□□□□ 0.9
SNX3-202ENST00000349379 TNFAIP8L3Q5GJ75 292 aa20.67■□□□□ 0.9
SNX3-202ENST00000349379 LINC00696Q6ZRV3 163 aa20.67■□□□□ 0.9
SNX3-202ENST00000349379 EFCAB3Q8N7B9 438 aa20.67■□□□□ 0.9
SNX3-202ENST00000349379 METTL6Q8TCB7 284 aa20.67■□□□□ 0.9
SNX3-202ENST00000349379 ANKRD9Q96BM1 317 aaPredicted RBP20.67■□□□□ 0.9
SNX3-202ENST00000349379 ZIM3Q96PE6 472 aa20.67■□□□□ 0.9
SNX3-202ENST00000349379 MRPL1Q9BYD6 325 aaKnown RBP20.67■□□□□ 0.9
SNX3-202ENST00000349379 IQCGQ9H095 443 aaKnown RBP20.67■□□□□ 0.9
SNX3-202ENST00000349379 RNF32Q9H0A6 362 aa20.67■□□□□ 0.9
SNX3-202ENST00000349379 ADAP2Q9NPF8 381 aa20.67■□□□□ 0.9
SNX3-202ENST00000349379 SENP1Q9P0U3 644 aa20.67■□□□□ 0.9
SNX3-202ENST00000349379 SERTM1A2A2V5 107 aa20.66■□□□□ 0.9
SNX3-202ENST00000349379 PROM1O43490 865 aa20.66■□□□□ 0.9
SNX3-202ENST00000349379 TYROBPO43914 113 aa20.66■□□□□ 0.9
SNX3-202ENST00000349379 SPAG7O75391 227 aa20.66■□□□□ 0.9
SNX3-202ENST00000349379 FAM58BPP0C7Q3 252 aa20.66■□□□□ 0.9
SNX3-202ENST00000349379 TPP2P29144 1249 aaPredicted RBP20.66■□□□□ 0.9
SNX3-202ENST00000349379 PPP2R1BP30154 601 aa20.66■□□□□ 0.9
SNX3-202ENST00000349379 HTR6P50406 440 aa20.66■□□□□ 0.9
SNX3-202ENST00000349379 GPR143P51810 404 aa20.66■□□□□ 0.9
SNX3-202ENST00000349379 GALNT1Q10472 559 aaPredicted RBP20.66■□□□□ 0.9
SNX3-202ENST00000349379 TBL3Q12788 808 aaKnown RBP20.66■□□□□ 0.9
SNX3-202ENST00000349379 CSTF3Q12996 717 aaKnown RBP20.66■□□□□ 0.9
SNX3-202ENST00000349379 PLEKHN1Q494U1 663 aaPredicted RBP20.66■□□□□ 0.9
SNX3-202ENST00000349379 C18orf63Q68DL7 685 aa20.66■□□□□ 0.9
SNX3-202ENST00000349379 CLNKQ7Z7G1 428 aa20.66■□□□□ 0.9
SNX3-202ENST00000349379 C10orf107Q8IVU9 208 aa20.66■□□□□ 0.9
SNX3-202ENST00000349379 TCP10LQ8TDR4 215 aa20.66■□□□□ 0.9
SNX3-202ENST00000349379 FAM111AQ96PZ2 611 aa20.66■□□□□ 0.9
SNX3-202ENST00000349379 KCNA7Q96RP8 456 aa20.66■□□□□ 0.9
SNX3-202ENST00000349379 SMC6Q96SB8 1091 aa20.66■□□□□ 0.9
SNX3-202ENST00000349379 HBEGFQ99075 208 aa20.66■□□□□ 0.9
SNX3-202ENST00000349379 NPAS2Q99743 824 aa20.66■□□□□ 0.9
SNX3-202ENST00000349379 RPF2Q9H7B2 306 aaKnown RBP20.66■□□□□ 0.9
SNX3-202ENST00000349379 KCNK13Q9HB14 408 aa20.66■□□□□ 0.9
SNX3-202ENST00000349379 MID1IP1Q9NPA3 183 aa20.66■□□□□ 0.9
SNX3-202ENST00000349379 AHSPQ9NZD4 102 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms