RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 KREMEN2Q8NCW0 462 aa17.25■□□□□ 0.35
PTP4A3-202ENST00000349124 TRMT61AQ96FX7 289 aaKnown RBP17.25■□□□□ 0.35
PTP4A3-202ENST00000349124 ANKHQ9HCJ1 492 aa17.25■□□□□ 0.35
PTP4A3-202ENST00000349124 ASAH2Q9NR71 780 aa17.25■□□□□ 0.35
PTP4A3-202ENST00000349124 EHD3Q9NZN3 535 aa17.25■□□□□ 0.35
PTP4A3-202ENST00000349124 DYRK1BQ9Y463 629 aa17.25■□□□□ 0.35
PTP4A3-202ENST00000349124 HELZP42694 1942 aaKnown RBP17.25■□□□□ 0.35
PTP4A3-202ENST00000349124 ZAR1LA6NP61 321 aa17.25■□□□□ 0.35
PTP4A3-202ENST00000349124 WASHC1A8K0Z3 465 aa17.25■□□□□ 0.35
PTP4A3-202ENST00000349124 HAT1O14929 419 aa17.25■□□□□ 0.35
PTP4A3-202ENST00000349124 SOD1P00441 154 aa17.25■□□□□ 0.35
PTP4A3-202ENST00000349124 BCHEP06276 602 aa17.25■□□□□ 0.35
PTP4A3-202ENST00000349124 ARAFP10398 606 aa17.25■□□□□ 0.35
PTP4A3-202ENST00000349124 ITGA2P17301 1181 aa17.25■□□□□ 0.35
PTP4A3-202ENST00000349124 NTHL1P78549 312 aa17.25■□□□□ 0.35
PTP4A3-202ENST00000349124 PCDH1Q08174 1060 aa17.25■□□□□ 0.35
PTP4A3-202ENST00000349124 NFE2L1Q14494 772 aa17.25■□□□□ 0.35
PTP4A3-202ENST00000349124 ZNF770Q6IQ21 691 aaPredicted RBP17.25■□□□□ 0.35
PTP4A3-202ENST00000349124 WASH2PQ6VEQ5 465 aa17.25■□□□□ 0.35
PTP4A3-202ENST00000349124 CCDC80Q76M96 950 aa17.25■□□□□ 0.35
PTP4A3-202ENST00000349124 PARS2Q7L3T8 475 aaKnown RBP17.25■□□□□ 0.35
PTP4A3-202ENST00000349124 TAGAPQ8N103 731 aa17.25■□□□□ 0.35
PTP4A3-202ENST00000349124 GPR32P1Q8NGA4 272 aa17.25■□□□□ 0.35
PTP4A3-202ENST00000349124 NUAK2Q9H093 628 aa17.25■□□□□ 0.35
PTP4A3-202ENST00000349124 RC3H2Q9HBD1 1191 aaKnown RBP17.25■□□□□ 0.35
PTP4A3-202ENST00000349124 IL36AQ9UHA7 158 aa17.25■□□□□ 0.35
PTP4A3-202ENST00000349124 LINC00854A0A1B0GVQ3 168 aa17.24■□□□□ 0.35
PTP4A3-202ENST00000349124 ANKDD1BA6NHY2 528 aa17.24■□□□□ 0.35
PTP4A3-202ENST00000349124 B4GALT2O60909 372 aa17.24■□□□□ 0.35
PTP4A3-202ENST00000349124 IRS1P35568 1242 aa17.24■□□□□ 0.35
PTP4A3-202ENST00000349124 ALDH9A1P49189 494 aa17.24■□□□□ 0.35
PTP4A3-202ENST00000349124 PRKCDQ05655 676 aa17.24■□□□□ 0.35
PTP4A3-202ENST00000349124 RBBP4Q09028 425 aa17.24■□□□□ 0.35
PTP4A3-202ENST00000349124 E2F2Q14209 437 aa17.24■□□□□ 0.35
PTP4A3-202ENST00000349124 FBXO43Q4G163 708 aa17.24■□□□□ 0.35
PTP4A3-202ENST00000349124 ZNF658BQ4V348 819 aaPredicted RBP17.24■□□□□ 0.35
PTP4A3-202ENST00000349124 ZNF805Q5CZA5 627 aa17.24■□□□□ 0.35
PTP4A3-202ENST00000349124 NXPE4Q6UWF7 544 aa17.24■□□□□ 0.35
PTP4A3-202ENST00000349124 AKAP14Q86UN6 197 aa17.24■□□□□ 0.35
PTP4A3-202ENST00000349124 LAS2Q8IYD9 372 aa17.24■□□□□ 0.35
PTP4A3-202ENST00000349124 OR4D11Q8NGI4 311 aa17.24■□□□□ 0.35
PTP4A3-202ENST00000349124 SLC38A5Q8WUX1 472 aa17.24■□□□□ 0.35
PTP4A3-202ENST00000349124 ZSWIM3Q96MP5 696 aa17.24■□□□□ 0.35
PTP4A3-202ENST00000349124 UGT2A1Q9Y4X1 527 aa17.24■□□□□ 0.35
PTP4A3-202ENST00000349124 OBSL1O75147 1896 aa17.24■□□□□ 0.35
PTP4A3-202ENST00000349124 FOXE1O00358 373 aaPredicted RBP17.24■□□□□ 0.35
PTP4A3-202ENST00000349124 AP3D1O14617 1153 aa17.24■□□□□ 0.35
PTP4A3-202ENST00000349124 TPST2O60704 377 aa17.24■□□□□ 0.35
PTP4A3-202ENST00000349124 CXCL14O95715 111 aa17.24■□□□□ 0.35
PTP4A3-202ENST00000349124 PTGER1P34995 402 aa17.24■□□□□ 0.35
PTP4A3-202ENST00000349124 RPS19P39019 145 aaKnown RBP17.24■□□□□ 0.35
PTP4A3-202ENST00000349124 DSTNP60981 165 aa17.24■□□□□ 0.35
PTP4A3-202ENST00000349124 ZNF45Q02386 682 aa17.24■□□□□ 0.35
PTP4A3-202ENST00000349124 ZNF630Q2M218 657 aaPredicted RBP17.24■□□□□ 0.35
PTP4A3-202ENST00000349124 ZMAT1Q5H9K5 638 aa17.24■□□□□ 0.35
PTP4A3-202ENST00000349124 PLAG1Q6DJT9 500 aa17.24■□□□□ 0.35
PTP4A3-202ENST00000349124 LILRA6Q6PI73 481 aa17.24■□□□□ 0.35
PTP4A3-202ENST00000349124 ZNF547Q8IVP9 402 aa17.24■□□□□ 0.35
PTP4A3-202ENST00000349124 ADGRF3Q8IZF5 1079 aa17.24■□□□□ 0.35
PTP4A3-202ENST00000349124 SLC5A11Q8WWX8 675 aa17.24■□□□□ 0.35
PTP4A3-202ENST00000349124 OTUB1Q96FW1 271 aaPredicted RBP17.24■□□□□ 0.35
PTP4A3-202ENST00000349124 BARHL1Q9BZE3 327 aa17.24■□□□□ 0.35
PTP4A3-202ENST00000349124 RERGLQ9H628 205 aa17.24■□□□□ 0.35
PTP4A3-202ENST00000349124 MIEF1Q9NQG6 463 aa17.24■□□□□ 0.35
PTP4A3-202ENST00000349124 FBXL12Q9NXK8 326 aa17.24■□□□□ 0.35
PTP4A3-202ENST00000349124 SAGE2PA6NJ88 616 aa17.23■□□□□ 0.35
PTP4A3-202ENST00000349124 TBX6O95947 436 aaPredicted RBP17.23■□□□□ 0.35
PTP4A3-202ENST00000349124 IFNW1P05000 195 aa17.23■□□□□ 0.35
PTP4A3-202ENST00000349124 MMP12P39900 470 aa17.23■□□□□ 0.35
PTP4A3-202ENST00000349124 MADCAM1Q13477 382 aa17.23■□□□□ 0.35
PTP4A3-202ENST00000349124 COL9A2Q14055 689 aaPredicted RBP17.23■□□□□ 0.35
PTP4A3-202ENST00000349124 TUBA3EQ6PEY2 450 aa17.23■□□□□ 0.35
PTP4A3-202ENST00000349124 KLHDC8AQ8IYD2 350 aa17.23■□□□□ 0.35
PTP4A3-202ENST00000349124 LRRC56Q8IYG6 542 aaPredicted RBP17.23■□□□□ 0.35
PTP4A3-202ENST00000349124 OR9A1PQ8NGU1 263 aa17.23■□□□□ 0.35
PTP4A3-202ENST00000349124 OPALINQ96PE5 141 aa17.23■□□□□ 0.35
PTP4A3-202ENST00000349124 FAM83CQ9BQN1 747 aa17.23■□□□□ 0.35
PTP4A3-202ENST00000349124 SGPP1Q9BX95 441 aa17.23■□□□□ 0.35
PTP4A3-202ENST00000349124 CDCA4Q9BXL8 241 aa17.23■□□□□ 0.35
PTP4A3-202ENST00000349124 TPK1Q9H3S4 243 aa17.23■□□□□ 0.35
PTP4A3-202ENST00000349124 HHATLQ9HCP6 504 aa17.23■□□□□ 0.35
PTP4A3-202ENST00000349124 KLK4Q9Y5K2 254 aa17.23■□□□□ 0.35
PTP4A3-202ENST00000349124 LILRB5O75023 590 aa17.23■□□□□ 0.35
PTP4A3-202ENST00000349124 MOSPD3O75425 235 aa17.23■□□□□ 0.35
PTP4A3-202ENST00000349124 FGF18O76093 207 aa17.23■□□□□ 0.35
PTP4A3-202ENST00000349124 MED26O95402 600 aa17.23■□□□□ 0.35
PTP4A3-202ENST00000349124 RHCEP18577 417 aa17.23■□□□□ 0.35
PTP4A3-202ENST00000349124 EIF4HQ15056 248 aaKnown RBP17.23■□□□□ 0.35
PTP4A3-202ENST00000349124 FAM83HQ6ZRV2 1179 aaPredicted RBP17.23■□□□□ 0.35
PTP4A3-202ENST00000349124 DPPA4Q7L190 304 aa17.23■□□□□ 0.35
PTP4A3-202ENST00000349124 CXorf40BQ96DE9 158 aa17.23■□□□□ 0.35
PTP4A3-202ENST00000349124 CRELD1Q96HD1 420 aa17.23■□□□□ 0.35
PTP4A3-202ENST00000349124 F2RL3Q96RI0 385 aa17.23■□□□□ 0.35
PTP4A3-202ENST00000349124 MYNNQ9NPC7 610 aa17.23■□□□□ 0.35
PTP4A3-202ENST00000349124 TDP1Q9NUW8 608 aa17.23■□□□□ 0.35
PTP4A3-202ENST00000349124 CLN6Q9NWW5 311 aa17.23■□□□□ 0.35
PTP4A3-202ENST00000349124 CCDC59Q9P031 241 aaKnown RBP17.23■□□□□ 0.35
PTP4A3-202ENST00000349124 ANTXRLA6NF34 631 aa17.22■□□□□ 0.35
PTP4A3-202ENST00000349124 TNFSF8P32971 234 aa17.22■□□□□ 0.35
PTP4A3-202ENST00000349124 TCTN3Q6NUS6 607 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms