RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 STSP08842 583 aa12.7□□□□□ -0.38
CASC4-202ENST00000345795 SERPINB10P48595 397 aa12.7□□□□□ -0.38
CASC4-202ENST00000345795 PPP2CBP62714 309 aa12.7□□□□□ -0.38
CASC4-202ENST00000345795 PPP2CAP67775 309 aa12.7□□□□□ -0.38
CASC4-202ENST00000345795 SLC36A3Q495N2 470 aa12.7□□□□□ -0.38
CASC4-202ENST00000345795 ZNF776Q68DI1 518 aaPredicted RBP12.7□□□□□ -0.38
CASC4-202ENST00000345795 ANKRD54Q6NXT1 300 aa12.7□□□□□ -0.38
CASC4-202ENST00000345795 SLCO4C1Q6ZQN7 724 aa12.7□□□□□ -0.38
CASC4-202ENST00000345795 NUDT13Q86X67 352 aa12.7□□□□□ -0.38
CASC4-202ENST00000345795 UBE2E3Q969T4 207 aa12.7□□□□□ -0.38
CASC4-202ENST00000345795 TMEM19Q96HH6 336 aa12.7□□□□□ -0.38
CASC4-202ENST00000345795 SFXN1Q9H9B4 322 aa12.7□□□□□ -0.38
CASC4-202ENST00000345795 DMRT3Q9NQL9 472 aa12.7□□□□□ -0.38
CASC4-202ENST00000345795 DYTNA2CJ06 578 aa12.7□□□□□ -0.38
CASC4-202ENST00000345795 TFECO14948 347 aaPredicted RBP12.7□□□□□ -0.38
CASC4-202ENST00000345795 KIAA0355O15063 1070 aa12.7□□□□□ -0.38
CASC4-202ENST00000345795 VILLO15195 856 aa12.7□□□□□ -0.38
CASC4-202ENST00000345795 RGS10O43665 173 aa12.7□□□□□ -0.38
CASC4-202ENST00000345795 FESP07332 822 aa12.7□□□□□ -0.38
CASC4-202ENST00000345795 CXCR2P25025 360 aa12.7□□□□□ -0.38
CASC4-202ENST00000345795 VSX2P58304 361 aaPredicted RBP12.7□□□□□ -0.38
CASC4-202ENST00000345795 DEPDC1Q5TB30 811 aa12.7□□□□□ -0.38
CASC4-202ENST00000345795 KIAA1161Q6NSJ0 714 aa12.7□□□□□ -0.38
CASC4-202ENST00000345795 SHISA6Q6ZSJ9 500 aa12.7□□□□□ -0.38
CASC4-202ENST00000345795 GALNT7Q86SF2 657 aa12.7□□□□□ -0.38
CASC4-202ENST00000345795 ZNF547Q8IVP9 402 aa12.7□□□□□ -0.38
CASC4-202ENST00000345795 ZZZ3Q8IYH5 903 aa12.7□□□□□ -0.38
CASC4-202ENST00000345795 AADATQ8N5Z0 425 aa12.7□□□□□ -0.38
CASC4-202ENST00000345795 RERGQ96A58 199 aaPredicted RBP12.7□□□□□ -0.38
CASC4-202ENST00000345795 SLC35G5Q96KT7 338 aa12.7□□□□□ -0.38
CASC4-202ENST00000345795 MCCC1Q96RQ3 725 aaPredicted RBP12.7□□□□□ -0.38
CASC4-202ENST00000345795 ARMC1Q9NVT9 282 aa12.7□□□□□ -0.38
CASC4-202ENST00000345795 TLX2O43763 284 aaPredicted RBP12.7□□□□□ -0.38
CASC4-202ENST00000345795 PRMT3O60678 531 aa12.7□□□□□ -0.38
CASC4-202ENST00000345795 OLFM2O95897 454 aa12.7□□□□□ -0.38
CASC4-202ENST00000345795 IFNA14P01570 189 aa12.7□□□□□ -0.38
CASC4-202ENST00000345795 HNRNPA1P09651 372 aaKnown RBP eCLIP12.7□□□□□ -0.38
CASC4-202ENST00000345795 ITGB7P26010 798 aa12.7□□□□□ -0.38
CASC4-202ENST00000345795 PTX3P26022 381 aaPredicted RBP12.7□□□□□ -0.38
CASC4-202ENST00000345795 DDX6P26196 483 aaKnown RBP eCLIP12.7□□□□□ -0.38
CASC4-202ENST00000345795 RGS8P57771 180 aaPredicted RBP12.7□□□□□ -0.38
CASC4-202ENST00000345795 DNASE1L3Q13609 305 aa12.7□□□□□ -0.38
CASC4-202ENST00000345795 SNAPC1Q16533 368 aa12.7□□□□□ -0.38
CASC4-202ENST00000345795 C6orf132Q5T0Z8 1188 aa12.7□□□□□ -0.38
CASC4-202ENST00000345795 FCRLBQ6BAA4 426 aa12.7□□□□□ -0.38
CASC4-202ENST00000345795 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.7□□□□□ -0.38
CASC4-202ENST00000345795 KLHDC8AQ8IYD2 350 aa12.7□□□□□ -0.38
CASC4-202ENST00000345795 FBXO15Q8NCQ5 510 aaPredicted RBP12.7□□□□□ -0.38
CASC4-202ENST00000345795 SETD9Q8NE22 299 aa12.7□□□□□ -0.38
CASC4-202ENST00000345795 OR52E1Q8NGJ3 308 aa12.7□□□□□ -0.38
CASC4-202ENST00000345795 GPR151Q8TDV0 419 aa12.7□□□□□ -0.38
CASC4-202ENST00000345795 ISG20Q96AZ6 181 aaKnown RBP12.7□□□□□ -0.38
CASC4-202ENST00000345795 PDLIM5Q96HC4 596 aaKnown RBP12.7□□□□□ -0.38
CASC4-202ENST00000345795 DCAF13Q9NV06 445 aaKnown RBP12.7□□□□□ -0.38
CASC4-202ENST00000345795 HRASLS2Q9NWW9 162 aa12.7□□□□□ -0.38
CASC4-202ENST00000345795 H2AFY2Q9P0M6 372 aaPredicted RBP12.7□□□□□ -0.38
CASC4-202ENST00000345795 NDUFS2O75306 463 aa12.69□□□□□ -0.38
CASC4-202ENST00000345795 FCER2P06734 321 aa12.69□□□□□ -0.38
CASC4-202ENST00000345795 MYF5P13349 255 aa12.69□□□□□ -0.38
CASC4-202ENST00000345795 CD36P16671 472 aa12.69□□□□□ -0.38
CASC4-202ENST00000345795 MATN1P21941 496 aa12.69□□□□□ -0.38
CASC4-202ENST00000345795 KCNC4Q03721 635 aa12.69□□□□□ -0.38
CASC4-202ENST00000345795 FOXM1Q08050 763 aa12.69□□□□□ -0.38
CASC4-202ENST00000345795 GRSF1Q12849 480 aaKnown RBP eCLIP12.69□□□□□ -0.38
CASC4-202ENST00000345795 SLC13A2Q13183 592 aa12.69□□□□□ -0.38
CASC4-202ENST00000345795 DUSP7Q16829 419 aa12.69□□□□□ -0.38
CASC4-202ENST00000345795 ARHGAP22Q7Z5H3 698 aa12.69□□□□□ -0.38
CASC4-202ENST00000345795 KRT73Q86Y46 540 aa12.69□□□□□ -0.38
CASC4-202ENST00000345795 DCP2Q8IU60 420 aaKnown RBP12.69□□□□□ -0.38
CASC4-202ENST00000345795 TCEANCQ8N8B7 351 aa12.69□□□□□ -0.38
CASC4-202ENST00000345795 VWCEQ96DN2 955 aa12.69□□□□□ -0.38
CASC4-202ENST00000345795 BTBD1Q9H0C5 482 aa12.69□□□□□ -0.38
CASC4-202ENST00000345795 KLHL1Q9NR64 748 aa12.69□□□□□ -0.38
CASC4-202ENST00000345795 ZNF282Q9UDV7 671 aaPredicted RBP12.69□□□□□ -0.38
CASC4-202ENST00000345795 CDH7Q9ULB5 785 aa12.69□□□□□ -0.38
CASC4-202ENST00000345795 OR10H1Q9Y4A9 318 aa12.69□□□□□ -0.38
CASC4-202ENST00000345795 CHD9Q3L8U1 2897 aa12.69□□□□□ -0.38
CASC4-202ENST00000345795 KMOO15229 486 aa12.69□□□□□ -0.38
CASC4-202ENST00000345795 NTN1O95631 604 aa12.69□□□□□ -0.38
CASC4-202ENST00000345795 HPGDP15428 266 aa12.69□□□□□ -0.38
CASC4-202ENST00000345795 CD247P20963 164 aa12.69□□□□□ -0.38
CASC4-202ENST00000345795 INPP1P49441 399 aa12.69□□□□□ -0.38
CASC4-202ENST00000345795 ZC3H12BQ5HYM0 836 aaKnown RBP12.69□□□□□ -0.38
CASC4-202ENST00000345795 ZNF730Q6ZMV8 503 aa12.69□□□□□ -0.38
CASC4-202ENST00000345795 OR5M3Q8NGP4 307 aa12.69□□□□□ -0.38
CASC4-202ENST00000345795 ALPK1Q96QP1 1244 aa12.69□□□□□ -0.38
CASC4-202ENST00000345795 FAIM2Q9BWQ8 316 aa12.69□□□□□ -0.38
CASC4-202ENST00000345795 C1QTNF7Q9BXJ2 289 aa12.69□□□□□ -0.38
CASC4-202ENST00000345795 AMBRA1Q9C0C7 1298 aa12.69□□□□□ -0.38
CASC4-202ENST00000345795 OR51V1Q9H2C8 321 aa12.69□□□□□ -0.38
CASC4-202ENST00000345795 MAU2Q9Y6X3 613 aa12.69□□□□□ -0.38
CASC4-202ENST00000345795 CLDN24A6NM45 220 aa12.69□□□□□ -0.38
CASC4-202ENST00000345795 PGRMC2O15173 223 aa12.69□□□□□ -0.38
CASC4-202ENST00000345795 KCNK5O95279 499 aa12.69□□□□□ -0.38
CASC4-202ENST00000345795 SAGP10523 405 aaPredicted RBP12.69□□□□□ -0.38
CASC4-202ENST00000345795 DNAJA1P31689 397 aaKnown RBP12.69□□□□□ -0.38
CASC4-202ENST00000345795 MC3RP41968 323 aa12.69□□□□□ -0.38
CASC4-202ENST00000345795 TAB1Q15750 504 aa12.69□□□□□ -0.38
CASC4-202ENST00000345795 GPR19Q15760 415 aa12.69□□□□□ -0.38
CASC4-202ENST00000345795 DCST1Q5T197 706 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms