RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 RDH16O75452 317 aa13.03□□□□□ -0.32
TPM4-202ENST00000344824 TGFB1P01137 390 aa13.03□□□□□ -0.32
TPM4-202ENST00000344824 PDGFAP04085 211 aa13.03□□□□□ -0.32
TPM4-202ENST00000344824 HEXBP07686 556 aa13.03□□□□□ -0.32
TPM4-202ENST00000344824 PLA2G2AP14555 144 aa13.03□□□□□ -0.32
TPM4-202ENST00000344824 MMP11P24347 488 aa13.03□□□□□ -0.32
TPM4-202ENST00000344824 ITGA3P26006 1051 aa13.03□□□□□ -0.32
TPM4-202ENST00000344824 SCTRP47872 440 aa13.03□□□□□ -0.32
TPM4-202ENST00000344824 EMP3P54852 163 aa13.03□□□□□ -0.32
TPM4-202ENST00000344824 RELAQ04206 551 aa13.03□□□□□ -0.32
TPM4-202ENST00000344824 EEF1A2Q05639 463 aaKnown RBP13.03□□□□□ -0.32
TPM4-202ENST00000344824 RGS1Q08116 209 aa13.03□□□□□ -0.32
TPM4-202ENST00000344824 LSM12Q3MHD2 195 aaKnown RBP13.03□□□□□ -0.32
TPM4-202ENST00000344824 XKR7Q5GH72 579 aa13.03□□□□□ -0.32
TPM4-202ENST00000344824 DCAF10Q5QP82 559 aa13.03□□□□□ -0.32
TPM4-202ENST00000344824 TMEM198Q66K66 360 aa13.03□□□□□ -0.32
TPM4-202ENST00000344824 TCTN3Q6NUS6 607 aa13.03□□□□□ -0.32
TPM4-202ENST00000344824 VN1R5Q7Z5H4 357 aa13.03□□□□□ -0.32
TPM4-202ENST00000344824 AMER3Q8N944 861 aa13.03□□□□□ -0.32
TPM4-202ENST00000344824 C8orf44Q96CB5 159 aa13.03□□□□□ -0.32
TPM4-202ENST00000344824 DMRT3Q9NQL9 472 aa13.03□□□□□ -0.32
TPM4-202ENST00000344824 SEMA3GQ9NS98 782 aa13.03□□□□□ -0.32
TPM4-202ENST00000344824 C14orf105Q9NVL8 296 aa13.03□□□□□ -0.32
TPM4-202ENST00000344824 GPR83Q9NYM4 423 aa13.03□□□□□ -0.32
TPM4-202ENST00000344824 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.03□□□□□ -0.32
TPM4-202ENST00000344824 HEY2Q9UBP5 337 aa13.03□□□□□ -0.32
TPM4-202ENST00000344824 C3orf18Q9UK00 162 aa13.03□□□□□ -0.32
TPM4-202ENST00000344824 FBXL4Q9UKA2 621 aa13.03□□□□□ -0.32
TPM4-202ENST00000344824 MAP4K5Q9Y4K4 846 aa13.03□□□□□ -0.32
TPM4-202ENST00000344824 HS3ST3B1Q9Y662 390 aa13.03□□□□□ -0.32
TPM4-202ENST00000344824 SGK494L7N484 410 aa13.02□□□□□ -0.33
TPM4-202ENST00000344824 SAP18O00422 153 aaKnown RBP13.02□□□□□ -0.33
TPM4-202ENST00000344824 NSA2O95478 260 aaKnown RBP13.02□□□□□ -0.33
TPM4-202ENST00000344824 ETHE1O95571 254 aa13.02□□□□□ -0.33
TPM4-202ENST00000344824 IGHEP01854 428 aa13.02□□□□□ -0.33
TPM4-202ENST00000344824 NCF2P19878 526 aaPredicted RBP13.02□□□□□ -0.33
TPM4-202ENST00000344824 CSTF3Q12996 717 aaKnown RBP13.02□□□□□ -0.33
TPM4-202ENST00000344824 MINDY4Q4G0A6 757 aa13.02□□□□□ -0.33
TPM4-202ENST00000344824 ATP6AP1LQ52LC2 224 aa13.02□□□□□ -0.33
TPM4-202ENST00000344824 Q6ZSR9 355 aa13.02□□□□□ -0.33
TPM4-202ENST00000344824 GALNT16Q8N428 558 aa13.02□□□□□ -0.33
TPM4-202ENST00000344824 ANKS4BQ8N8V4 417 aa13.02□□□□□ -0.33
TPM4-202ENST00000344824 TEX19Q8NA77 164 aa13.02□□□□□ -0.33
TPM4-202ENST00000344824 FDCSPQ8NFU4 85 aa13.02□□□□□ -0.33
TPM4-202ENST00000344824 MAELQ96JY0 434 aaKnown RBP13.02□□□□□ -0.33
TPM4-202ENST00000344824 MESP1Q9BRJ9 268 aa13.02□□□□□ -0.33
TPM4-202ENST00000344824 CCDC28BQ9BUN5 200 aa13.02□□□□□ -0.33
TPM4-202ENST00000344824 C1orf50Q9BV19 199 aa13.02□□□□□ -0.33
TPM4-202ENST00000344824 NUDT9Q9BW91 350 aa13.02□□□□□ -0.33
TPM4-202ENST00000344824 PITHD1Q9GZP4 211 aaPredicted RBP13.02□□□□□ -0.33
TPM4-202ENST00000344824 OR51B5Q9H339 312 aa13.02□□□□□ -0.33
TPM4-202ENST00000344824 NT5DC2Q9H857 520 aa13.02□□□□□ -0.33
TPM4-202ENST00000344824 MKKSQ9NPJ1 570 aaPredicted RBP13.02□□□□□ -0.33
TPM4-202ENST00000344824 NAALAD2Q9Y3Q0 740 aa13.02□□□□□ -0.33
TPM4-202ENST00000344824 CNTRLQ7Z7A1 2325 aa13.02□□□□□ -0.33
TPM4-202ENST00000344824 NBASA2RRP1 2371 aa13.02□□□□□ -0.33
TPM4-202ENST00000344824 VSTM2BA6NLU5 285 aa13.01□□□□□ -0.33
TPM4-202ENST00000344824 IDSB3KWA1 339 aa13.01□□□□□ -0.33
TPM4-202ENST00000344824 SOCS6O14544 535 aa13.01□□□□□ -0.33
TPM4-202ENST00000344824 LSM1O15116 133 aaKnown RBP13.01□□□□□ -0.33
TPM4-202ENST00000344824 VPS4BO75351 444 aa13.01□□□□□ -0.33
TPM4-202ENST00000344824 SEC22BO75396 215 aa13.01□□□□□ -0.33
TPM4-202ENST00000344824 JRKO75564 520 aa13.01□□□□□ -0.33
TPM4-202ENST00000344824 KLHL18O94889 574 aa13.01□□□□□ -0.33
TPM4-202ENST00000344824 ONECUT2O95948 504 aa13.01□□□□□ -0.33
TPM4-202ENST00000344824 B3GALT4O96024 378 aa13.01□□□□□ -0.33
TPM4-202ENST00000344824 ZNF888P0CJ79 500 aaPredicted RBP13.01□□□□□ -0.33
TPM4-202ENST00000344824 ACPPP15309 386 aa13.01□□□□□ -0.33
TPM4-202ENST00000344824 XCR1P46094 333 aa13.01□□□□□ -0.33
TPM4-202ENST00000344824 EMP2P54851 167 aa13.01□□□□□ -0.33
TPM4-202ENST00000344824 RPL38P63173 70 aaKnown RBP13.01□□□□□ -0.33
TPM4-202ENST00000344824 OLR1P78380 273 aa13.01□□□□□ -0.33
TPM4-202ENST00000344824 KLRB1Q12918 225 aa13.01□□□□□ -0.33
TPM4-202ENST00000344824 FAM53BQ14153 422 aa13.01□□□□□ -0.33
TPM4-202ENST00000344824 AP5B1Q2VPB7 878 aa13.01□□□□□ -0.33
TPM4-202ENST00000344824 TOR1AIP1Q5JTV8 583 aa13.01□□□□□ -0.33
TPM4-202ENST00000344824 IRAK1BP1Q5VVH5 260 aa13.01□□□□□ -0.33
TPM4-202ENST00000344824 TMEM214Q6NUQ4 689 aaKnown RBP13.01□□□□□ -0.33
TPM4-202ENST00000344824 TRIM46Q7Z4K8 759 aa13.01□□□□□ -0.33
TPM4-202ENST00000344824 LAPTM4BQ86VI4 370 aa13.01□□□□□ -0.33
TPM4-202ENST00000344824 ZC3H7AQ8IWR0 971 aaKnown RBP13.01□□□□□ -0.33
TPM4-202ENST00000344824 PARP9Q8IXQ6 854 aa13.01□□□□□ -0.33
TPM4-202ENST00000344824 ARHGEF39Q8N4T4 335 aa13.01□□□□□ -0.33
TPM4-202ENST00000344824 GBP7Q8N8V2 638 aaPredicted RBP13.01□□□□□ -0.33
TPM4-202ENST00000344824 FNDC5Q8NAU1 212 aa13.01□□□□□ -0.33
TPM4-202ENST00000344824 CEP70Q8NHQ1 597 aa13.01□□□□□ -0.33
TPM4-202ENST00000344824 ACTRT2Q8TDY3 377 aa13.01□□□□□ -0.33
TPM4-202ENST00000344824 VPS50Q96JG6 964 aa13.01□□□□□ -0.33
TPM4-202ENST00000344824 CCT7Q99832 543 aa13.01□□□□□ -0.33
TPM4-202ENST00000344824 MFRPQ9BY79 579 aa13.01□□□□□ -0.33
TPM4-202ENST00000344824 RHBGQ9H310 441 aa13.01□□□□□ -0.33
TPM4-202ENST00000344824 LRTM1Q9HBL6 345 aa13.01□□□□□ -0.33
TPM4-202ENST00000344824 ZFP69BQ9UJL9 534 aa13.01□□□□□ -0.33
TPM4-202ENST00000344824 MKL2Q9ULH7 1088 aa13.01□□□□□ -0.33
TPM4-202ENST00000344824 CCL27Q9Y4X3 112 aa13.01□□□□□ -0.33
TPM4-202ENST00000344824 FOXE1O00358 373 aaPredicted RBP13□□□□□ -0.33
TPM4-202ENST00000344824 CDC123O75794 336 aaPredicted RBP13□□□□□ -0.33
TPM4-202ENST00000344824 HSD3B1P14060 373 aa13□□□□□ -0.33
TPM4-202ENST00000344824 LBPP18428 481 aa13□□□□□ -0.33
TPM4-202ENST00000344824 HSD3B2P26439 372 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms