RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 SH3BGRL2Q9UJC5 107 aa15.7■□□□□ 0.1
SMARCA4-201ENST00000344626 NPIPA1Q9UND3 350 aa15.7■□□□□ 0.1
SMARCA4-201ENST00000344626 VGLL3A8MV65 326 aa15.7■□□□□ 0.1
SMARCA4-201ENST00000344626 M0QX08 132 aa15.7■□□□□ 0.1
SMARCA4-201ENST00000344626 PGGT1BP53609 377 aa15.7■□□□□ 0.1
SMARCA4-201ENST00000344626 ITGADQ13349 1161 aa15.7■□□□□ 0.1
SMARCA4-201ENST00000344626 DCAF12Q5T6F0 453 aa15.7■□□□□ 0.1
SMARCA4-201ENST00000344626 SMARCD3Q6STE5 483 aa15.7■□□□□ 0.1
SMARCA4-201ENST00000344626 RNF130Q86XS8 419 aa15.7■□□□□ 0.1
SMARCA4-201ENST00000344626 CD200R1Q8TD46 325 aa15.7■□□□□ 0.1
SMARCA4-201ENST00000344626 NMD3Q96D46 503 aaKnown RBP15.7■□□□□ 0.1
SMARCA4-201ENST00000344626 TYROBPO43914 113 aa15.7■□□□□ 0.1
SMARCA4-201ENST00000344626 GJB3O75712 270 aa15.7■□□□□ 0.1
SMARCA4-201ENST00000344626 MANEAQ5SRI9 462 aa15.7■□□□□ 0.1
SMARCA4-201ENST00000344626 LILRA6Q6PI73 481 aa15.7■□□□□ 0.1
SMARCA4-201ENST00000344626 ATG14Q6ZNE5 492 aa15.7■□□□□ 0.1
SMARCA4-201ENST00000344626 PLPP6Q8IY26 295 aa15.7■□□□□ 0.1
SMARCA4-201ENST00000344626 TSEN15Q8WW01 171 aaKnown RBP15.7■□□□□ 0.1
SMARCA4-201ENST00000344626 BHLHE41Q9C0J9 482 aaPredicted RBP15.7■□□□□ 0.1
SMARCA4-201ENST00000344626 MKRN2Q9H000 416 aaKnown RBP15.7■□□□□ 0.1
SMARCA4-201ENST00000344626 ANKMY1Q9P2S6 941 aa15.7■□□□□ 0.1
SMARCA4-201ENST00000344626 WASHC1A8K0Z3 465 aa15.7■□□□□ 0.1
SMARCA4-201ENST00000344626 RTCAO00442 366 aaKnown RBP15.7■□□□□ 0.1
SMARCA4-201ENST00000344626 KIF1CO43896 1103 aaKnown RBP15.7■□□□□ 0.1
SMARCA4-201ENST00000344626 GABRA3P34903 492 aa15.7■□□□□ 0.1
SMARCA4-201ENST00000344626 CAPGP40121 348 aa15.7■□□□□ 0.1
SMARCA4-201ENST00000344626 GANABQ14697 944 aaKnown RBP15.7■□□□□ 0.1
SMARCA4-201ENST00000344626 WASH2PQ6VEQ5 465 aa15.7■□□□□ 0.1
SMARCA4-201ENST00000344626 ZCCHC7Q8N3Z6 543 aaKnown RBP15.7■□□□□ 0.1
SMARCA4-201ENST00000344626 HORMAD2Q8N7B1 307 aa15.7■□□□□ 0.1
SMARCA4-201ENST00000344626 NSUN5Q96P11 429 aaKnown RBP15.7■□□□□ 0.1
SMARCA4-201ENST00000344626 RASSF1Q9NS23 344 aa15.7■□□□□ 0.1
SMARCA4-201ENST00000344626 GIN1Q9NXP7 522 aa15.7■□□□□ 0.1
SMARCA4-201ENST00000344626 HS3ST3A1Q9Y663 406 aa15.7■□□□□ 0.1
SMARCA4-201ENST00000344626 IGLV3-10A0A075B6K4 115 aa15.69■□□□□ 0.1
SMARCA4-201ENST00000344626 PCYT1AP49585 367 aa15.69■□□□□ 0.1
SMARCA4-201ENST00000344626 CRB2Q5IJ48 1285 aa15.69■□□□□ 0.1
SMARCA4-201ENST00000344626 NANOGNBQ7Z5D8 188 aa15.69■□□□□ 0.1
SMARCA4-201ENST00000344626 C1orf210Q8IVY1 113 aa15.69■□□□□ 0.1
SMARCA4-201ENST00000344626 OR4K1Q8NGD4 311 aa15.69■□□□□ 0.1
SMARCA4-201ENST00000344626 ASB9Q96DX5 294 aa15.69■□□□□ 0.1
SMARCA4-201ENST00000344626 FAM86C1Q9NVL1 165 aa15.69■□□□□ 0.1
SMARCA4-201ENST00000344626 H0Y8X5 98 aa15.69■□□□□ 0.1
SMARCA4-201ENST00000344626 ZBTB11O95625 1053 aaPredicted RBP15.69■□□□□ 0.1
SMARCA4-201ENST00000344626 C1SP09871 688 aa15.69■□□□□ 0.1
SMARCA4-201ENST00000344626 DNASE1L1P49184 302 aa15.69■□□□□ 0.1
SMARCA4-201ENST00000344626 CTC1Q2NKJ3 1217 aa15.69■□□□□ 0.1
SMARCA4-201ENST00000344626 ATG2BQ96BY7 2078 aa15.69■□□□□ 0.1
SMARCA4-201ENST00000344626 C17orf113A0A1B0GUU1 675 aa15.69■□□□□ 0.1
SMARCA4-201ENST00000344626 TBX10O75333 385 aa15.69■□□□□ 0.1
SMARCA4-201ENST00000344626 CYB5AP00167 134 aa15.69■□□□□ 0.1
SMARCA4-201ENST00000344626 POU2F1P14859 743 aa15.69■□□□□ 0.1
SMARCA4-201ENST00000344626 S100GP29377 79 aa15.69■□□□□ 0.1
SMARCA4-201ENST00000344626 STAT5AP42229 794 aa15.69■□□□□ 0.1
SMARCA4-201ENST00000344626 OMPP47874 163 aa15.69■□□□□ 0.1
SMARCA4-201ENST00000344626 NR1H2P55055 460 aa15.69■□□□□ 0.1
SMARCA4-201ENST00000344626 TMEM196Q5HYL7 178 aa15.69■□□□□ 0.1
SMARCA4-201ENST00000344626 FAM69BQ5VUD6 431 aa15.69■□□□□ 0.1
SMARCA4-201ENST00000344626 FRRS1Q6ZNA5 592 aa15.69■□□□□ 0.1
SMARCA4-201ENST00000344626 OR10G2Q8NGC3 310 aa15.69■□□□□ 0.1
SMARCA4-201ENST00000344626 OR52E1Q8NGJ3 308 aa15.69■□□□□ 0.1
SMARCA4-201ENST00000344626 L3HYPDHQ96EM0 354 aa15.69■□□□□ 0.1
SMARCA4-201ENST00000344626 COMMD4Q9H0A8 199 aa15.69■□□□□ 0.1
SMARCA4-201ENST00000344626 SCN4AP35499 1836 aa15.69■□□□□ 0.1
SMARCA4-201ENST00000344626 FADS2O95864 444 aaKnown RBP15.69■□□□□ 0.1
SMARCA4-201ENST00000344626 ZNF3P17036 446 aa15.69■□□□□ 0.1
SMARCA4-201ENST00000344626 DNAJA1P31689 397 aaKnown RBP15.69■□□□□ 0.1
SMARCA4-201ENST00000344626 UBAP2Q5T6F2 1119 aaKnown RBP15.69■□□□□ 0.1
SMARCA4-201ENST00000344626 OR4N5Q8IXE1 308 aa15.69■□□□□ 0.1
SMARCA4-201ENST00000344626 TEX26Q8N6G2 289 aa15.69■□□□□ 0.1
SMARCA4-201ENST00000344626 IL17RCQ8NAC3 791 aa15.69■□□□□ 0.1
SMARCA4-201ENST00000344626 PRRX2Q99811 253 aa15.69■□□□□ 0.1
SMARCA4-201ENST00000344626 ZBTB20Q9HC78 741 aaPredicted RBP15.69■□□□□ 0.1
SMARCA4-201ENST00000344626 TIGARQ9NQ88 270 aa15.69■□□□□ 0.1
SMARCA4-201ENST00000344626 PPP4R1LQ9P1A2 415 aa15.69■□□□□ 0.1
SMARCA4-201ENST00000344626 POMPQ9Y244 141 aa15.69■□□□□ 0.1
SMARCA4-201ENST00000344626 TMEM5Q9Y2B1 443 aa15.69■□□□□ 0.1
SMARCA4-201ENST00000344626 DOCK3Q8IZD9 2030 aa15.69■□□□□ 0.1
SMARCA4-201ENST00000344626 A0A1W2PPC1 479 aa15.68■□□□□ 0.1
SMARCA4-201ENST00000344626 H7C0S8 307 aa15.68■□□□□ 0.1
SMARCA4-201ENST00000344626 HMGB3O15347 200 aaKnown RBP15.68■□□□□ 0.1
SMARCA4-201ENST00000344626 BRINP1O60477 761 aa15.68■□□□□ 0.1
SMARCA4-201ENST00000344626 PRLP01236 227 aa15.68■□□□□ 0.1
SMARCA4-201ENST00000344626 MT-ND1P03886 318 aa15.68■□□□□ 0.1
SMARCA4-201ENST00000344626 SIGLEC14Q08ET2 396 aa15.68■□□□□ 0.1
SMARCA4-201ENST00000344626 FADDQ13158 208 aa15.68■□□□□ 0.1
SMARCA4-201ENST00000344626 TMEM52BQ4KMG9 183 aa15.68■□□□□ 0.1
SMARCA4-201ENST00000344626 ANKRD26P1Q6NSI1 321 aa15.68■□□□□ 0.1
SMARCA4-201ENST00000344626 IKBIPQ70UQ0 350 aa15.68■□□□□ 0.1
SMARCA4-201ENST00000344626 HDDC2Q7Z4H3 204 aa15.68■□□□□ 0.1
SMARCA4-201ENST00000344626 CDC6Q99741 560 aa15.68■□□□□ 0.1
SMARCA4-201ENST00000344626 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.68■□□□□ 0.1
SMARCA4-201ENST00000344626 AP1M2Q9Y6Q5 423 aa15.68■□□□□ 0.1
SMARCA4-201ENST00000344626 MCM3APO60318 1980 aa15.68■□□□□ 0.1
SMARCA4-201ENST00000344626 FAM149AA5PLN7 773 aa15.68■□□□□ 0.1
SMARCA4-201ENST00000344626 PENKP01210 267 aaPredicted RBP15.68■□□□□ 0.1
SMARCA4-201ENST00000344626 BMP8BP34820 402 aa15.68■□□□□ 0.1
SMARCA4-201ENST00000344626 PGFP49763 221 aa15.68■□□□□ 0.1
SMARCA4-201ENST00000344626 ADPRHP54922 357 aa15.68■□□□□ 0.1
SMARCA4-201ENST00000344626 KLHL22Q53GT1 634 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms