RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 VPS29Q9UBQ0 182 aa9.24□□□□□ -0.93
HOXA1-201ENST00000343060 SF3B6Q9Y3B4 125 aaKnown RBP9.24□□□□□ -0.93
HOXA1-201ENST00000343060 PRAMEF33A0A0G2JMD5 474 aa9.24□□□□□ -0.93
HOXA1-201ENST00000343060 AGAP14A8MT82 685 aa9.24□□□□□ -0.93
HOXA1-201ENST00000343060 BET1O15155 118 aa9.24□□□□□ -0.93
HOXA1-201ENST00000343060 PRAMEF10O60809 474 aa9.24□□□□□ -0.93
HOXA1-201ENST00000343060 RFPL3O75679 317 aa9.24□□□□□ -0.93
HOXA1-201ENST00000343060 PDGFAP04085 211 aa9.24□□□□□ -0.93
HOXA1-201ENST00000343060 ETFAP13804 333 aa9.24□□□□□ -0.93
HOXA1-201ENST00000343060 APEX1P27695 318 aaKnown RBP9.24□□□□□ -0.93
HOXA1-201ENST00000343060 SSTR4P31391 388 aa9.24□□□□□ -0.93
HOXA1-201ENST00000343060 EVI2BP34910 448 aa9.24□□□□□ -0.93
HOXA1-201ENST00000343060 BTG1P62324 171 aa9.24□□□□□ -0.93
HOXA1-201ENST00000343060 RPS24P62847 133 aaKnown RBP9.24□□□□□ -0.93
HOXA1-201ENST00000343060 MGAT3Q09327 533 aa9.24□□□□□ -0.93
HOXA1-201ENST00000343060 CDKN3Q16667 212 aa9.24□□□□□ -0.93
HOXA1-201ENST00000343060 WSCD2Q2TBF2 565 aa9.24□□□□□ -0.93
HOXA1-201ENST00000343060 PLK5Q496M5 336 aa9.24□□□□□ -0.93
HOXA1-201ENST00000343060 GPR33Q49SQ1 333 aa9.24□□□□□ -0.93
HOXA1-201ENST00000343060 SLC25A30Q5SVS4 291 aa9.24□□□□□ -0.93
HOXA1-201ENST00000343060 LIPJQ5W064 366 aa9.24□□□□□ -0.93
HOXA1-201ENST00000343060 ADGRG2Q8IZP9 1017 aa9.24□□□□□ -0.93
HOXA1-201ENST00000343060 TTC9BQ8N6N2 239 aa9.24□□□□□ -0.93
HOXA1-201ENST00000343060 LSM14AQ8ND56 463 aaKnown RBP9.24□□□□□ -0.93
HOXA1-201ENST00000343060 C19orf18Q8NEA5 215 aa9.24□□□□□ -0.93
HOXA1-201ENST00000343060 APOBEC4Q8WW27 367 aaKnown RBP9.24□□□□□ -0.93
HOXA1-201ENST00000343060 CREB3L1Q96BA8 519 aa9.24□□□□□ -0.93
HOXA1-201ENST00000343060 IL4I1Q96RQ9 567 aa9.24□□□□□ -0.93
HOXA1-201ENST00000343060 TSSK6Q9BXA6 273 aa9.24□□□□□ -0.93
HOXA1-201ENST00000343060 PCDHB9Q9Y5E1 797 aa9.24□□□□□ -0.93
HOXA1-201ENST00000343060 PLXNB3Q9ULL4 1909 aa9.23□□□□□ -0.93
HOXA1-201ENST00000343060 A0A0U1RQF3 1178 aa9.23□□□□□ -0.93
HOXA1-201ENST00000343060 TMEM189-UBE2V1I3L0A0 370 aa9.23□□□□□ -0.93
HOXA1-201ENST00000343060 AP2A2O94973 939 aa9.23□□□□□ -0.93
HOXA1-201ENST00000343060 IFNA14P01570 189 aa9.23□□□□□ -0.93
HOXA1-201ENST00000343060 ALPIP09923 528 aa9.23□□□□□ -0.93
HOXA1-201ENST00000343060 ZNF865P0CJ78 1059 aaPredicted RBP9.23□□□□□ -0.93
HOXA1-201ENST00000343060 IFI30P13284 250 aa9.23□□□□□ -0.93
HOXA1-201ENST00000343060 CD22P20273 847 aa9.23□□□□□ -0.93
HOXA1-201ENST00000343060 SP140Q13342 867 aa9.23□□□□□ -0.93
HOXA1-201ENST00000343060 C22orf42Q6IC83 251 aa9.23□□□□□ -0.93
HOXA1-201ENST00000343060 SDE2Q6IQ49 451 aa9.23□□□□□ -0.93
HOXA1-201ENST00000343060 CD200R1LQ6Q8B3 271 aa9.23□□□□□ -0.93
HOXA1-201ENST00000343060 PAQR6Q6TCH4 344 aa9.23□□□□□ -0.93
HOXA1-201ENST00000343060 UBE2R2Q712K3 238 aaPredicted RBP9.23□□□□□ -0.93
HOXA1-201ENST00000343060 HDDC2Q7Z4H3 204 aa9.23□□□□□ -0.93
HOXA1-201ENST00000343060 ZNF598Q86UK7 904 aaKnown RBP9.23□□□□□ -0.93
HOXA1-201ENST00000343060 RASGRP3Q8IV61 690 aa9.23□□□□□ -0.93
HOXA1-201ENST00000343060 NXPE1Q8N323 547 aa9.23□□□□□ -0.93
HOXA1-201ENST00000343060 Q8N402 240 aa9.23□□□□□ -0.93
HOXA1-201ENST00000343060 RNF175Q8N4F7 328 aa9.23□□□□□ -0.93
HOXA1-201ENST00000343060 OXR1Q8N573 874 aa9.23□□□□□ -0.93
HOXA1-201ENST00000343060 OR4A15Q8NGL6 344 aa9.23□□□□□ -0.93
HOXA1-201ENST00000343060 OR8J1Q8NGP2 316 aa9.23□□□□□ -0.93
HOXA1-201ENST00000343060 NFKBIDQ8NI38 313 aa9.23□□□□□ -0.93
HOXA1-201ENST00000343060 PIGUQ9H490 435 aa9.23□□□□□ -0.93
HOXA1-201ENST00000343060 CWH43Q9H720 699 aa9.23□□□□□ -0.93
HOXA1-201ENST00000343060 CCSER2Q9H7U1 834 aa9.23□□□□□ -0.93
HOXA1-201ENST00000343060 C11orf16Q9NQ32 467 aa9.23□□□□□ -0.93
HOXA1-201ENST00000343060 C1GALT1Q9NS00 363 aa9.23□□□□□ -0.93
HOXA1-201ENST00000343060 PTTG3PQ9NZH4 202 aa9.23□□□□□ -0.93
HOXA1-201ENST00000343060 SRRDQ9UH36 339 aa9.23□□□□□ -0.93
HOXA1-201ENST00000343060 ATP6V1HQ9UI12 483 aa9.23□□□□□ -0.93
HOXA1-201ENST00000343060 SLC45A1Q9Y2W3 748 aa9.23□□□□□ -0.93
HOXA1-201ENST00000343060 ASB4Q9Y574 426 aa9.23□□□□□ -0.93
HOXA1-201ENST00000343060 CDH10Q9Y6N8 788 aa9.23□□□□□ -0.93
HOXA1-201ENST00000343060 TRAV19A0A0A6YYK7 116 aa9.23□□□□□ -0.93
HOXA1-201ENST00000343060 FAM240BA0A1B0GVZ2 78 aa9.23□□□□□ -0.93
HOXA1-201ENST00000343060 PRR23AA6NEV1 266 aa9.23□□□□□ -0.93
HOXA1-201ENST00000343060 SMLR1H3BR10 107 aa9.23□□□□□ -0.93
HOXA1-201ENST00000343060 TRIM77I1YAP6 450 aa9.23□□□□□ -0.93
HOXA1-201ENST00000343060 CBX4O00257 560 aa9.23□□□□□ -0.93
HOXA1-201ENST00000343060 SLC16A5O15375 505 aa9.23□□□□□ -0.93
HOXA1-201ENST00000343060 MPC1LP0DKB6 136 aa9.23□□□□□ -0.93
HOXA1-201ENST00000343060 ARAFP10398 606 aa9.23□□□□□ -0.93
HOXA1-201ENST00000343060 FGF9P31371 208 aaPredicted RBP9.23□□□□□ -0.93
HOXA1-201ENST00000343060 ATN1P54259 1190 aaPredicted RBP9.23□□□□□ -0.93
HOXA1-201ENST00000343060 RGS1Q08116 209 aa9.23□□□□□ -0.93
HOXA1-201ENST00000343060 ACSM2AQ08AH3 577 aa9.23□□□□□ -0.93
HOXA1-201ENST00000343060 TWF1Q12792 350 aa9.23□□□□□ -0.93
HOXA1-201ENST00000343060 CHIT1Q13231 466 aa9.23□□□□□ -0.93
HOXA1-201ENST00000343060 TPBGQ13641 420 aa9.23□□□□□ -0.93
HOXA1-201ENST00000343060 MFSD13AQ14CX5 517 aa9.23□□□□□ -0.93
HOXA1-201ENST00000343060 ZNF630Q2M218 657 aaPredicted RBP9.23□□□□□ -0.93
HOXA1-201ENST00000343060 C3orf38Q5JPI3 329 aa9.23□□□□□ -0.93
HOXA1-201ENST00000343060 ACSM2BQ68CK6 577 aa9.23□□□□□ -0.93
HOXA1-201ENST00000343060 FAAH2Q6GMR7 532 aa9.23□□□□□ -0.93
HOXA1-201ENST00000343060 CXorf57Q6NSI4 855 aaKnown RBP9.23□□□□□ -0.93
HOXA1-201ENST00000343060 CNIH2Q6PI25 160 aa9.23□□□□□ -0.93
HOXA1-201ENST00000343060 CEACAM20Q6UY09 585 aa9.23□□□□□ -0.93
HOXA1-201ENST00000343060 ZNF852Q6ZMS4 543 aa9.23□□□□□ -0.93
HOXA1-201ENST00000343060 WDR53Q7Z5U6 358 aaPredicted RBP9.23□□□□□ -0.93
HOXA1-201ENST00000343060 PDZD3Q86UT5 571 aa9.23□□□□□ -0.93
HOXA1-201ENST00000343060 CBARPQ8N350 705 aaPredicted RBP9.23□□□□□ -0.93
HOXA1-201ENST00000343060 ASB11Q8WXH4 323 aa9.23□□□□□ -0.93
HOXA1-201ENST00000343060 OMA1Q96E52 524 aa9.23□□□□□ -0.93
HOXA1-201ENST00000343060 BHLHE41Q9C0J9 482 aaPredicted RBP9.23□□□□□ -0.93
HOXA1-201ENST00000343060 SPNS1Q9H2V7 528 aa9.23□□□□□ -0.93
HOXA1-201ENST00000343060 CRISPLD1Q9H336 500 aa9.23□□□□□ -0.93
HOXA1-201ENST00000343060 BRF2Q9HAW0 419 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms