RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 TBR1Q16650 682 aa12.43□□□□□ -0.42
TUBD1-202ENST00000340993 PARP9Q8IXQ6 854 aa12.43□□□□□ -0.42
TUBD1-202ENST00000340993 METTL21AQ8WXB1 218 aa12.43□□□□□ -0.42
TUBD1-202ENST00000340993 SORT1Q99523 831 aa12.43□□□□□ -0.42
TUBD1-202ENST00000340993 TRMOQ9BU70 441 aa12.43□□□□□ -0.42
TUBD1-202ENST00000340993 PNO1Q9NRX1 252 aaKnown RBP12.43□□□□□ -0.42
TUBD1-202ENST00000340993 A0A0A6YYD5 115 aa12.42□□□□□ -0.42
TUBD1-202ENST00000340993 GNG14A0A1W2PPG7 69 aa12.42□□□□□ -0.42
TUBD1-202ENST00000340993 H3BQF6 201 aa12.42□□□□□ -0.42
TUBD1-202ENST00000340993 TGFBR3LH3BV60 316 aa12.42□□□□□ -0.42
TUBD1-202ENST00000340993 PCDH7O60245 1069 aa12.42□□□□□ -0.42
TUBD1-202ENST00000340993 ONECUT2O95948 504 aa12.42□□□□□ -0.42
TUBD1-202ENST00000340993 CHEK2O96017 543 aa12.42□□□□□ -0.42
TUBD1-202ENST00000340993 FAM58BPP0C7Q3 252 aa12.42□□□□□ -0.42
TUBD1-202ENST00000340993 ACPPP15309 386 aa12.42□□□□□ -0.42
TUBD1-202ENST00000340993 NR1D1P20393 614 aa12.42□□□□□ -0.42
TUBD1-202ENST00000340993 MMP11P24347 488 aa12.42□□□□□ -0.42
TUBD1-202ENST00000340993 TPP2P29144 1249 aaPredicted RBP12.42□□□□□ -0.42
TUBD1-202ENST00000340993 MAPK12P53778 367 aa12.42□□□□□ -0.42
TUBD1-202ENST00000340993 RHAGQ02094 409 aa12.42□□□□□ -0.42
TUBD1-202ENST00000340993 ACSM2AQ08AH3 577 aa12.42□□□□□ -0.42
TUBD1-202ENST00000340993 CSTF3Q12996 717 aaKnown RBP12.42□□□□□ -0.42
TUBD1-202ENST00000340993 LY6DQ14210 128 aa12.42□□□□□ -0.42
TUBD1-202ENST00000340993 ACSM2BQ68CK6 577 aa12.42□□□□□ -0.42
TUBD1-202ENST00000340993 METTL4Q8N3J2 472 aa12.42□□□□□ -0.42
TUBD1-202ENST00000340993 OR11G2Q8NGC1 345 aa12.42□□□□□ -0.42
TUBD1-202ENST00000340993 TGIF2Q9GZN2 237 aa12.42□□□□□ -0.42
TUBD1-202ENST00000340993 ING2Q9H160 280 aa12.42□□□□□ -0.42
TUBD1-202ENST00000340993 BRF2Q9HAW0 419 aa12.42□□□□□ -0.42
TUBD1-202ENST00000340993 PRTFDC1Q9NRG1 225 aa12.42□□□□□ -0.42
TUBD1-202ENST00000340993 SEMA3GQ9NS98 782 aa12.42□□□□□ -0.42
TUBD1-202ENST00000340993 KCMF1Q9P0J7 381 aa12.42□□□□□ -0.42
TUBD1-202ENST00000340993 KALRNO60229 2985 aa12.42□□□□□ -0.42
TUBD1-202ENST00000340993 PRRC2CQ9Y520 2896 aaKnown RBP12.41□□□□□ -0.42
TUBD1-202ENST00000340993 A0A1W2PR48 441 aa12.41□□□□□ -0.42
TUBD1-202ENST00000340993 A0A1W2PS29 197 aa12.41□□□□□ -0.42
TUBD1-202ENST00000340993 AIFM1O95831 613 aa12.41□□□□□ -0.42
TUBD1-202ENST00000340993 JAK1P23458 1154 aa12.41□□□□□ -0.42
TUBD1-202ENST00000340993 SFT2D3Q587I9 215 aa12.41□□□□□ -0.42
TUBD1-202ENST00000340993 ANKRD37Q7Z713 158 aa12.41□□□□□ -0.42
TUBD1-202ENST00000340993 GPR180Q86V85 440 aa12.41□□□□□ -0.42
TUBD1-202ENST00000340993 OR6Y1Q8NGX8 325 aa12.41□□□□□ -0.42
TUBD1-202ENST00000340993 CLHC1Q8NHS4 586 aa12.41□□□□□ -0.42
TUBD1-202ENST00000340993 GFM2Q969S9 779 aaKnown RBP12.41□□□□□ -0.42
TUBD1-202ENST00000340993 C3orf30Q96M34 536 aa12.41□□□□□ -0.42
TUBD1-202ENST00000340993 OR1F2PQ96R84 312 aa12.41□□□□□ -0.42
TUBD1-202ENST00000340993 C1orf50Q9BV19 199 aa12.41□□□□□ -0.42
TUBD1-202ENST00000340993 ROGDIQ9GZN7 287 aa12.41□□□□□ -0.42
TUBD1-202ENST00000340993 MANSC1Q9H8J5 431 aa12.41□□□□□ -0.42
TUBD1-202ENST00000340993 AHSPQ9NZD4 102 aa12.41□□□□□ -0.42
TUBD1-202ENST00000340993 TSC22D4Q9Y3Q8 395 aa12.41□□□□□ -0.42
TUBD1-202ENST00000340993 KCNMB2Q9Y691 235 aa12.41□□□□□ -0.42
TUBD1-202ENST00000340993 SPACA6W5XKT8 324 aa12.41□□□□□ -0.42
TUBD1-202ENST00000340993 TMEM114B3SHH9 223 aa12.41□□□□□ -0.42
TUBD1-202ENST00000340993 CYR61O00622 381 aa12.41□□□□□ -0.42
TUBD1-202ENST00000340993 PGRMC2O15173 223 aa12.41□□□□□ -0.42
TUBD1-202ENST00000340993 PEX11AO75192 247 aa12.41□□□□□ -0.42
TUBD1-202ENST00000340993 SEC22BO75396 215 aa12.41□□□□□ -0.42
TUBD1-202ENST00000340993 IFNA16P05015 189 aa12.41□□□□□ -0.42
TUBD1-202ENST00000340993 CD63P08962 238 aa12.41□□□□□ -0.42
TUBD1-202ENST00000340993 ITGA3P26006 1051 aa12.41□□□□□ -0.42
TUBD1-202ENST00000340993 OR4D2P58180 307 aa12.41□□□□□ -0.42
TUBD1-202ENST00000340993 NAA20P61599 178 aa12.41□□□□□ -0.42
TUBD1-202ENST00000340993 RPL38P63173 70 aaKnown RBP12.41□□□□□ -0.42
TUBD1-202ENST00000340993 RAE1P78406 368 aaKnown RBP12.41□□□□□ -0.42
TUBD1-202ENST00000340993 TNFRSF17Q02223 184 aa12.41□□□□□ -0.42
TUBD1-202ENST00000340993 ACTN3Q08043 901 aaPredicted RBP12.41□□□□□ -0.42
TUBD1-202ENST00000340993 STX4Q12846 297 aa12.41□□□□□ -0.42
TUBD1-202ENST00000340993 SF3A3Q12874 501 aaKnown RBP eCLIP12.41□□□□□ -0.42
TUBD1-202ENST00000340993 ZNF750Q32MQ0 723 aa12.41□□□□□ -0.42
TUBD1-202ENST00000340993 TUBB8Q3ZCM7 444 aa12.41□□□□□ -0.42
TUBD1-202ENST00000340993 HSP90B2PQ58FF3 399 aa12.41□□□□□ -0.42
TUBD1-202ENST00000340993 NIPAL1Q6NVV3 410 aa12.41□□□□□ -0.42
TUBD1-202ENST00000340993 BORAQ6PGQ7 559 aa12.41□□□□□ -0.42
TUBD1-202ENST00000340993 PAGE2Q7Z2X7 111 aa12.41□□□□□ -0.42
TUBD1-202ENST00000340993 CLYBLQ8N0X4 340 aa12.41□□□□□ -0.42
TUBD1-202ENST00000340993 THOC1Q96FV9 657 aaKnown RBP12.41□□□□□ -0.42
TUBD1-202ENST00000340993 NPLQ9BXD5 320 aaPredicted RBP12.41□□□□□ -0.42
TUBD1-202ENST00000340993 DDX31Q9H8H2 851 aaKnown RBP12.41□□□□□ -0.42
TUBD1-202ENST00000340993 ZNF71Q9NQZ8 489 aaPredicted RBP12.41□□□□□ -0.42
TUBD1-202ENST00000340993 INTS9Q9NV88 658 aaKnown RBP12.41□□□□□ -0.42
TUBD1-202ENST00000340993 ASB4Q9Y574 426 aa12.41□□□□□ -0.42
TUBD1-202ENST00000340993 NSG1A0A0A6YYJ2 146 aa12.4□□□□□ -0.42
TUBD1-202ENST00000340993 FGF17O60258 216 aa12.4□□□□□ -0.42
TUBD1-202ENST00000340993 SEMA3DO95025 777 aa12.4□□□□□ -0.42
TUBD1-202ENST00000340993 LRATO95237 230 aa12.4□□□□□ -0.42
TUBD1-202ENST00000340993 NR2F6P10588 404 aa12.4□□□□□ -0.42
TUBD1-202ENST00000340993 COX6A1P12074 109 aa12.4□□□□□ -0.42
TUBD1-202ENST00000340993 POLE2P56282 527 aa12.4□□□□□ -0.42
TUBD1-202ENST00000340993 TAS2R50P59544 299 aa12.4□□□□□ -0.42
TUBD1-202ENST00000340993 UGT3A2Q3SY77 523 aa12.4□□□□□ -0.42
TUBD1-202ENST00000340993 FAM47EQ6ZV65 393 aa12.4□□□□□ -0.42
TUBD1-202ENST00000340993 CPEB2Q7Z5Q1 589 aaKnown RBP12.4□□□□□ -0.42
TUBD1-202ENST00000340993 GBP7Q8N8V2 638 aaPredicted RBP12.4□□□□□ -0.42
TUBD1-202ENST00000340993 CHTF18Q8WVB6 975 aa12.4□□□□□ -0.42
TUBD1-202ENST00000340993 APOBEC4Q8WW27 367 aaKnown RBP12.4□□□□□ -0.42
TUBD1-202ENST00000340993 ZNF75CPQ92670 426 aaPredicted RBP12.4□□□□□ -0.42
TUBD1-202ENST00000340993 PPWD1Q96BP3 646 aaKnown RBP12.4□□□□□ -0.42
TUBD1-202ENST00000340993 NUF2Q9BZD4 464 aa12.4□□□□□ -0.42
TUBD1-202ENST00000340993 ILKAPQ9H0C8 392 aaPredicted RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms