RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 PPP2R1BP30154 601 aa18■□□□□ 0.47
SYNE4-202ENST00000340477 DNAJB13P59910 316 aa18■□□□□ 0.47
SYNE4-202ENST00000340477 MFAP5Q13361 173 aa18■□□□□ 0.47
SYNE4-202ENST00000340477 NADK2Q4G0N4 442 aa18■□□□□ 0.47
SYNE4-202ENST00000340477 ABHD17BQ5VST6 288 aa18■□□□□ 0.47
SYNE4-202ENST00000340477 LIPMQ5VYY2 423 aa18■□□□□ 0.47
SYNE4-202ENST00000340477 LINC00696Q6ZRV3 163 aa18■□□□□ 0.47
SYNE4-202ENST00000340477 CLNKQ7Z7G1 428 aa18■□□□□ 0.47
SYNE4-202ENST00000340477 GPR180Q86V85 440 aa18■□□□□ 0.47
SYNE4-202ENST00000340477 SCUBE1Q8IWY4 988 aa18■□□□□ 0.47
SYNE4-202ENST00000340477 SIRT6Q8N6T7 355 aa18■□□□□ 0.47
SYNE4-202ENST00000340477 BANPQ8N9N5 519 aa18■□□□□ 0.47
SYNE4-202ENST00000340477 PNPLA2Q96AD5 504 aa18■□□□□ 0.47
SYNE4-202ENST00000340477 LMF1Q96S06 567 aa18■□□□□ 0.47
SYNE4-202ENST00000340477 CSF3RQ99062 836 aa18■□□□□ 0.47
SYNE4-202ENST00000340477 WDR77Q9BQA1 342 aaPredicted RBP18■□□□□ 0.47
SYNE4-202ENST00000340477 SORBS1Q9BX66 1292 aaKnown RBP18■□□□□ 0.47
SYNE4-202ENST00000340477 MFRPQ9BY79 579 aa18■□□□□ 0.47
SYNE4-202ENST00000340477 MMP25Q9NPA2 562 aa18■□□□□ 0.47
SYNE4-202ENST00000340477 MID1IP1Q9NPA3 183 aa18■□□□□ 0.47
SYNE4-202ENST00000340477 NECTIN3Q9NQS3 549 aa18■□□□□ 0.47
SYNE4-202ENST00000340477 OXSMQ9NWU1 459 aa18■□□□□ 0.47
SYNE4-202ENST00000340477 SLC12A4Q9UP95 1085 aa18■□□□□ 0.47
SYNE4-202ENST00000340477 PLLPQ9Y342 182 aa18■□□□□ 0.47
SYNE4-202ENST00000340477 BSNQ9UPA5 3926 aa18■□□□□ 0.47
SYNE4-202ENST00000340477 CYR61O00622 381 aa17.99■□□□□ 0.47
SYNE4-202ENST00000340477 PPP6CO00743 305 aa17.99■□□□□ 0.47
SYNE4-202ENST00000340477 CTNSO60931 367 aa17.99■□□□□ 0.47
SYNE4-202ENST00000340477 ULK1O75385 1050 aa17.99■□□□□ 0.47
SYNE4-202ENST00000340477 ESRRBO95718 433 aa17.99■□□□□ 0.47
SYNE4-202ENST00000340477 PDYNP01213 254 aa17.99■□□□□ 0.47
SYNE4-202ENST00000340477 IFNA16P05015 189 aa17.99■□□□□ 0.47
SYNE4-202ENST00000340477 CELA2AP08217 269 aa17.99■□□□□ 0.47
SYNE4-202ENST00000340477 MYZAPP0CAP1 466 aa17.99■□□□□ 0.47
SYNE4-202ENST00000340477 HSD3B1P14060 373 aa17.99■□□□□ 0.47
SYNE4-202ENST00000340477 PLA2G2AP14555 144 aa17.99■□□□□ 0.47
SYNE4-202ENST00000340477 HSD3B2P26439 372 aa17.99■□□□□ 0.47
SYNE4-202ENST00000340477 NAGLUP54802 743 aa17.99■□□□□ 0.47
SYNE4-202ENST00000340477 SLC26A5P58743 744 aa17.99■□□□□ 0.47
SYNE4-202ENST00000340477 ARG2P78540 354 aa17.99■□□□□ 0.47
SYNE4-202ENST00000340477 TNFRSF17Q02223 184 aa17.99■□□□□ 0.47
SYNE4-202ENST00000340477 ZNF33BQ06732 778 aa17.99■□□□□ 0.47
SYNE4-202ENST00000340477 ZNF844Q08AG5 666 aa17.99■□□□□ 0.47
SYNE4-202ENST00000340477 CSTF3Q12996 717 aaKnown RBP17.99■□□□□ 0.47
SYNE4-202ENST00000340477 SERTAD2Q14140 314 aa17.99■□□□□ 0.47
SYNE4-202ENST00000340477 TERF2Q15554 542 aa17.99■□□□□ 0.47
SYNE4-202ENST00000340477 FRMD7Q6ZUT3 714 aa17.99■□□□□ 0.47
SYNE4-202ENST00000340477 SLC5A8Q8N695 610 aa17.99■□□□□ 0.47
SYNE4-202ENST00000340477 EPN3Q9H201 632 aa17.99■□□□□ 0.47
SYNE4-202ENST00000340477 CENPHQ9H3R5 247 aa17.99■□□□□ 0.47
SYNE4-202ENST00000340477 GSTO2Q9H4Y5 243 aa17.99■□□□□ 0.47
SYNE4-202ENST00000340477 ADAP2Q9NPF8 381 aa17.99■□□□□ 0.47
SYNE4-202ENST00000340477 PNO1Q9NRX1 252 aaKnown RBP17.99■□□□□ 0.47
SYNE4-202ENST00000340477 ADAM29Q9UKF5 820 aa17.99■□□□□ 0.47
SYNE4-202ENST00000340477 B3GNT3Q9Y2A9 372 aa17.99■□□□□ 0.47
SYNE4-202ENST00000340477 TTLL8A6PVC2 850 aa17.98■□□□□ 0.47
SYNE4-202ENST00000340477 A8MUI8 341 aa17.98■□□□□ 0.47
SYNE4-202ENST00000340477 MANBAO00462 879 aa17.98■□□□□ 0.47
SYNE4-202ENST00000340477 ETHE1O95571 254 aa17.98■□□□□ 0.47
SYNE4-202ENST00000340477 FAM58BPP0C7Q3 252 aa17.98■□□□□ 0.47
SYNE4-202ENST00000340477 COX7A2P14406 83 aa17.98■□□□□ 0.47
SYNE4-202ENST00000340477 BSGP35613 385 aa17.98■□□□□ 0.47
SYNE4-202ENST00000340477 SOX11P35716 441 aa17.98■□□□□ 0.47
SYNE4-202ENST00000340477 HNRNPFP52597 415 aaKnown RBP17.98■□□□□ 0.47
SYNE4-202ENST00000340477 CEP85LQ5SZL2 805 aa17.98■□□□□ 0.47
SYNE4-202ENST00000340477 SLC6A19Q695T7 634 aa17.98■□□□□ 0.47
SYNE4-202ENST00000340477 TMEM132CQ8N3T6 1108 aa17.98■□□□□ 0.47
SYNE4-202ENST00000340477 RBMXL3Q8N7X1 1067 aaKnown RBP17.98■□□□□ 0.47
SYNE4-202ENST00000340477 CNDP1Q96KN2 507 aa17.98■□□□□ 0.47
SYNE4-202ENST00000340477 ZNF354BQ96LW1 612 aa17.98■□□□□ 0.47
SYNE4-202ENST00000340477 FAM111AQ96PZ2 611 aa17.98■□□□□ 0.47
SYNE4-202ENST00000340477 RPF2Q9H7B2 306 aaKnown RBP17.98■□□□□ 0.47
SYNE4-202ENST00000340477 DDX31Q9H8H2 851 aaKnown RBP17.98■□□□□ 0.47
SYNE4-202ENST00000340477 KCMF1Q9P0J7 381 aa17.98■□□□□ 0.47
SYNE4-202ENST00000340477 CPAMD8Q8IZJ3 1885 aa17.98■□□□□ 0.47
SYNE4-202ENST00000340477 A0A0A6YYD5 115 aa17.97■□□□□ 0.47
SYNE4-202ENST00000340477 A0A1B0GTL3 188 aa17.97■□□□□ 0.47
SYNE4-202ENST00000340477 A8MUA0 341 aa17.97■□□□□ 0.47
SYNE4-202ENST00000340477 J3QKU1 62 aa17.97■□□□□ 0.47
SYNE4-202ENST00000340477 DYRK3O43781 588 aa17.97■□□□□ 0.47
SYNE4-202ENST00000340477 GUCY1B2O75343 617 aa17.97■□□□□ 0.47
SYNE4-202ENST00000340477 SPAG7O75391 227 aa17.97■□□□□ 0.47
SYNE4-202ENST00000340477 EEDO75530 441 aaKnown RBP17.97■□□□□ 0.47
SYNE4-202ENST00000340477 MYO1DO94832 1006 aa17.97■□□□□ 0.47
SYNE4-202ENST00000340477 NR2F6P10588 404 aa17.97■□□□□ 0.47
SYNE4-202ENST00000340477 TLE1Q04724 770 aa17.97■□□□□ 0.47
SYNE4-202ENST00000340477 BIKQ13323 160 aa17.97■□□□□ 0.47
SYNE4-202ENST00000340477 ELAVL1Q15717 326 aaKnown RBP17.97■□□□□ 0.47
SYNE4-202ENST00000340477 COLEC12Q5KU26 742 aa17.97■□□□□ 0.47
SYNE4-202ENST00000340477 CCNYL2Q5T2Q4 361 aa17.97■□□□□ 0.47
SYNE4-202ENST00000340477 IGFL2Q6UWQ7 119 aa17.97■□□□□ 0.47
SYNE4-202ENST00000340477 C10orf107Q8IVU9 208 aa17.97■□□□□ 0.47
SYNE4-202ENST00000340477 HOMEZQ8IX15 550 aa17.97■□□□□ 0.47
SYNE4-202ENST00000340477 IQCKQ8N0W5 287 aa17.97■□□□□ 0.47
SYNE4-202ENST00000340477 GBP7Q8N8V2 638 aaPredicted RBP17.97■□□□□ 0.47
SYNE4-202ENST00000340477 TMEM52Q8NDY8 209 aa17.97■□□□□ 0.47
SYNE4-202ENST00000340477 DNAJB14Q8TBM8 379 aa17.97■□□□□ 0.47
SYNE4-202ENST00000340477 AGAP11Q8TF27 550 aa17.97■□□□□ 0.47
SYNE4-202ENST00000340477 TANKQ92844 425 aa17.97■□□□□ 0.47
SYNE4-202ENST00000340477 DAZLQ92904 295 aaKnown RBP17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms