RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 PIN1Q13526 163 aaPredicted RBP13.75□□□□□ -0.21
CPSF7-201ENST00000340437 SPIN4Q56A73 249 aa13.75□□□□□ -0.21
CPSF7-201ENST00000340437 CHTF18Q8WVB6 975 aa13.75□□□□□ -0.21
CPSF7-201ENST00000340437 GEMIN6Q8WXD5 167 aaKnown RBP13.75□□□□□ -0.21
CPSF7-201ENST00000340437 NECTIN4Q96NY8 510 aa13.75□□□□□ -0.21
CPSF7-201ENST00000340437 DEPDC7Q96QD5 511 aa13.75□□□□□ -0.21
CPSF7-201ENST00000340437 PRR14Q9BWN1 585 aa13.75□□□□□ -0.21
CPSF7-201ENST00000340437 SLC46A2Q9BY10 475 aa13.75□□□□□ -0.21
CPSF7-201ENST00000340437 IL21Q9HBE4 155 aa13.75□□□□□ -0.21
CPSF7-201ENST00000340437 DYRK4Q9NR20 520 aa13.75□□□□□ -0.21
CPSF7-201ENST00000340437 TAS2R9Q9NYW1 312 aa13.75□□□□□ -0.21
CPSF7-201ENST00000340437 BTNL2Q9UIR0 455 aa13.75□□□□□ -0.21
CPSF7-201ENST00000340437 YARS2Q9Y2Z4 477 aaKnown RBP13.75□□□□□ -0.21
CPSF7-201ENST00000340437 SNX11Q9Y5W9 270 aa13.75□□□□□ -0.21
CPSF7-201ENST00000340437 BACE2Q9Y5Z0 518 aa13.75□□□□□ -0.21
CPSF7-201ENST00000340437 GLOD5A6NK44 160 aa13.74□□□□□ -0.21
CPSF7-201ENST00000340437 SOD2P04179 222 aa13.74□□□□□ -0.21
CPSF7-201ENST00000340437 UGT2B10P36537 528 aa13.74□□□□□ -0.21
CPSF7-201ENST00000340437 GJA8P48165 433 aa13.74□□□□□ -0.21
CPSF7-201ENST00000340437 METAP1P53582 386 aa13.74□□□□□ -0.21
CPSF7-201ENST00000340437 DSTNP60981 165 aa13.74□□□□□ -0.21
CPSF7-201ENST00000340437 DBPQ10586 325 aaPredicted RBP13.74□□□□□ -0.21
CPSF7-201ENST00000340437 METTL2BQ6P1Q9 378 aaKnown RBP13.74□□□□□ -0.21
CPSF7-201ENST00000340437 Q6ZNB5 142 aa13.74□□□□□ -0.21
CPSF7-201ENST00000340437 MSANTD1Q6ZTZ1 278 aa13.74□□□□□ -0.21
CPSF7-201ENST00000340437 C1GALT1C1Q96EU7 318 aa13.74□□□□□ -0.21
CPSF7-201ENST00000340437 TXNDC15Q96J42 360 aa13.74□□□□□ -0.21
CPSF7-201ENST00000340437 SMURF1Q9HCE7 757 aa13.74□□□□□ -0.21
CPSF7-201ENST00000340437 PCDHGA3Q9Y5H0 932 aa13.74□□□□□ -0.21
CPSF7-201ENST00000340437 TRAV19A0A0A6YYK7 116 aa13.74□□□□□ -0.21
CPSF7-201ENST00000340437 MYL12BO14950 172 aa13.74□□□□□ -0.21
CPSF7-201ENST00000340437 GRM6O15303 877 aa13.74□□□□□ -0.21
CPSF7-201ENST00000340437 PTPN5P54829 565 aa13.74□□□□□ -0.21
CPSF7-201ENST00000340437 CD83Q01151 205 aa13.74□□□□□ -0.21
CPSF7-201ENST00000340437 IFITM2Q01629 132 aa13.74□□□□□ -0.21
CPSF7-201ENST00000340437 IRF3Q14653 427 aa13.74□□□□□ -0.21
CPSF7-201ENST00000340437 SSX1Q16384 188 aa13.74□□□□□ -0.21
CPSF7-201ENST00000340437 BAK1Q16611 211 aa13.74□□□□□ -0.21
CPSF7-201ENST00000340437 MPEG1Q2M385 716 aa13.74□□□□□ -0.21
CPSF7-201ENST00000340437 ZFP69Q49AA0 526 aa13.74□□□□□ -0.21
CPSF7-201ENST00000340437 C22orf42Q6IC83 251 aa13.74□□□□□ -0.21
CPSF7-201ENST00000340437 USP30Q70CQ3 517 aa13.74□□□□□ -0.21
CPSF7-201ENST00000340437 DENND6BQ8NEG7 585 aa13.74□□□□□ -0.21
CPSF7-201ENST00000340437 OR52N2Q8NGI0 321 aa13.74□□□□□ -0.21
CPSF7-201ENST00000340437 OR2A12Q8NGT7 310 aa13.74□□□□□ -0.21
CPSF7-201ENST00000340437 DIRAS2Q96HU8 199 aa13.74□□□□□ -0.21
CPSF7-201ENST00000340437 CTRCQ99895 268 aa13.74□□□□□ -0.21
CPSF7-201ENST00000340437 POLR2J3Q9H1A7 115 aaKnown RBP13.74□□□□□ -0.21
CPSF7-201ENST00000340437 SEMA3GQ9NS98 782 aa13.74□□□□□ -0.21
CPSF7-201ENST00000340437 FBXL12Q9NXK8 326 aa13.74□□□□□ -0.21
CPSF7-201ENST00000340437 CFL2Q9Y281 166 aa13.74□□□□□ -0.21
CPSF7-201ENST00000340437 PTTG1O95997 202 aa13.74□□□□□ -0.21
CPSF7-201ENST00000340437 IFNA14P01570 189 aa13.74□□□□□ -0.21
CPSF7-201ENST00000340437 PSMA1P25786 263 aaKnown RBP13.74□□□□□ -0.21
CPSF7-201ENST00000340437 TLE2Q04725 743 aa13.74□□□□□ -0.21
CPSF7-201ENST00000340437 POP5Q969H6 163 aaKnown RBP13.74□□□□□ -0.21
CPSF7-201ENST00000340437 ZNF558Q96NG5 402 aa13.74□□□□□ -0.21
CPSF7-201ENST00000340437 KCNK12Q9HB15 430 aa13.74□□□□□ -0.21
CPSF7-201ENST00000340437 PLSCR3Q9NRY6 295 aa13.74□□□□□ -0.21
CPSF7-201ENST00000340437 ASF1AQ9Y294 204 aa13.74□□□□□ -0.21
CPSF7-201ENST00000340437 N6AMT1Q9Y5N5 214 aa13.74□□□□□ -0.21
CPSF7-201ENST00000340437 FEZF1A0PJY2 475 aa13.73□□□□□ -0.21
CPSF7-201ENST00000340437 AGAP14A8MT82 685 aa13.73□□□□□ -0.21
CPSF7-201ENST00000340437 PRPH2P23942 346 aa13.73□□□□□ -0.21
CPSF7-201ENST00000340437 NNMTP40261 264 aa13.73□□□□□ -0.21
CPSF7-201ENST00000340437 LIM2P55344 173 aa13.73□□□□□ -0.21
CPSF7-201ENST00000340437 SP140Q13342 867 aa13.73□□□□□ -0.21
CPSF7-201ENST00000340437 TBRG1Q3YBR2 411 aa13.73□□□□□ -0.21
CPSF7-201ENST00000340437 FBXO43Q4G163 708 aa13.73□□□□□ -0.21
CPSF7-201ENST00000340437 DCST1Q5T197 706 aa13.73□□□□□ -0.21
CPSF7-201ENST00000340437 ATAD3CQ5T2N8 411 aa13.73□□□□□ -0.21
CPSF7-201ENST00000340437 PLAG1Q6DJT9 500 aa13.73□□□□□ -0.21
CPSF7-201ENST00000340437 ZNF517Q6ZMY9 492 aaPredicted RBP13.73□□□□□ -0.21
CPSF7-201ENST00000340437 SLCO4C1Q6ZQN7 724 aa13.73□□□□□ -0.21
CPSF7-201ENST00000340437 TCEAL4Q96EI5 215 aa13.73□□□□□ -0.21
CPSF7-201ENST00000340437 TRMT61AQ96FX7 289 aaKnown RBP13.73□□□□□ -0.21
CPSF7-201ENST00000340437 F2RL3Q96RI0 385 aa13.73□□□□□ -0.21
CPSF7-201ENST00000340437 WFDC6Q9BQY6 131 aa13.73□□□□□ -0.21
CPSF7-201ENST00000340437 TBC1D14Q9P2M4 693 aa13.73□□□□□ -0.21
CPSF7-201ENST00000340437 GPR52Q9Y2T5 361 aa13.73□□□□□ -0.21
CPSF7-201ENST00000340437 WNT6Q9Y6F9 365 aa13.73□□□□□ -0.21
CPSF7-201ENST00000340437 PIPSLA2A3N6 862 aa13.73□□□□□ -0.21
CPSF7-201ENST00000340437 K7ESM1 405 aa13.73□□□□□ -0.21
CPSF7-201ENST00000340437 SLC28A2O43868 658 aa13.73□□□□□ -0.21
CPSF7-201ENST00000340437 TNFRSF21O75509 655 aa13.73□□□□□ -0.21
CPSF7-201ENST00000340437 CYP2A6P11509 494 aaPredicted RBP13.73□□□□□ -0.21
CPSF7-201ENST00000340437 XKP51811 444 aa13.73□□□□□ -0.21
CPSF7-201ENST00000340437 MVDP53602 400 aa13.73□□□□□ -0.21
CPSF7-201ENST00000340437 MLLT1Q03111 559 aaPredicted RBP13.73□□□□□ -0.21
CPSF7-201ENST00000340437 SEC23BQ15437 767 aa13.73□□□□□ -0.21
CPSF7-201ENST00000340437 SPHARQ15513 63 aa13.73□□□□□ -0.21
CPSF7-201ENST00000340437 TIMM50Q3ZCQ8 353 aa13.73□□□□□ -0.21
CPSF7-201ENST00000340437 PYDC2Q56P42 97 aa13.73□□□□□ -0.21
CPSF7-201ENST00000340437 RAET1GQ6H3X3 334 aa13.73□□□□□ -0.21
CPSF7-201ENST00000340437 LACC1Q8IV20 430 aa13.73□□□□□ -0.21
CPSF7-201ENST00000340437 HORMAD2Q8N7B1 307 aa13.73□□□□□ -0.21
CPSF7-201ENST00000340437 KIAA1958Q8N8K9 716 aa13.73□□□□□ -0.21
CPSF7-201ENST00000340437 TBC1D20Q96BZ9 403 aa13.73□□□□□ -0.21
CPSF7-201ENST00000340437 CAPNS2Q96L46 248 aa13.73□□□□□ -0.21
CPSF7-201ENST00000340437 SIGLEC11Q96RL6 698 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms