RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 SMURF1Q9HCE7 757 aa17.96■□□□□ 0.46
PSPC1-201ENST00000338910 DYRK4Q9NR20 520 aa17.96■□□□□ 0.46
PSPC1-201ENST00000338910 V9GYH0 126 aa17.96■□□□□ 0.46
PSPC1-201ENST00000338910 AP2A2O94973 939 aa17.95■□□□□ 0.46
PSPC1-201ENST00000338910 TACR1P25103 407 aa17.95■□□□□ 0.46
PSPC1-201ENST00000338910 SLC6A12P48065 614 aa17.95■□□□□ 0.46
PSPC1-201ENST00000338910 TP53BP2Q13625 1128 aa17.95■□□□□ 0.46
PSPC1-201ENST00000338910 TIMM50Q3ZCQ8 353 aa17.95■□□□□ 0.46
PSPC1-201ENST00000338910 TANGO2Q6ICL3 276 aa17.95■□□□□ 0.46
PSPC1-201ENST00000338910 ZNF367Q7RTV3 350 aa17.95■□□□□ 0.46
PSPC1-201ENST00000338910 LRRC70Q7Z2Q7 622 aa17.95■□□□□ 0.46
PSPC1-201ENST00000338910 RIPOR3Q96MK2 946 aa17.95■□□□□ 0.46
PSPC1-201ENST00000338910 TSSK3Q96PN8 268 aa17.95■□□□□ 0.46
PSPC1-201ENST00000338910 HHIPQ96QV1 700 aa17.95■□□□□ 0.46
PSPC1-201ENST00000338910 ELOVL6Q9H5J4 265 aa17.95■□□□□ 0.46
PSPC1-201ENST00000338910 ZNF226Q9NYT6 803 aa17.95■□□□□ 0.46
PSPC1-201ENST00000338910 ZNF451Q9Y4E5 1061 aa17.95■□□□□ 0.46
PSPC1-201ENST00000338910 ANTXRLA6NF34 631 aa17.94■□□□□ 0.46
PSPC1-201ENST00000338910 CLIC1O00299 241 aa17.94■□□□□ 0.46
PSPC1-201ENST00000338910 PRAMEF4O60810 478 aa17.94■□□□□ 0.46
PSPC1-201ENST00000338910 SLCO2B1O94956 709 aa17.94■□□□□ 0.46
PSPC1-201ENST00000338910 PAPLNO95428 1278 aa17.94■□□□□ 0.46
PSPC1-201ENST00000338910 CD72P21854 359 aa17.94■□□□□ 0.46
PSPC1-201ENST00000338910 PBLDP30039 288 aaPredicted RBP17.94■□□□□ 0.46
PSPC1-201ENST00000338910 TEKQ02763 1124 aa17.94■□□□□ 0.46
PSPC1-201ENST00000338910 SYTL3Q4VX76 610 aa17.94■□□□□ 0.46
PSPC1-201ENST00000338910 PRAMEF9Q5VWM5 478 aa17.94■□□□□ 0.46
PSPC1-201ENST00000338910 ERICH5Q6P6B1 374 aa17.94■□□□□ 0.46
PSPC1-201ENST00000338910 SUN5Q8TC36 379 aa17.94■□□□□ 0.46
PSPC1-201ENST00000338910 FYTTD1Q96QD9 318 aaKnown RBP17.94■□□□□ 0.46
PSPC1-201ENST00000338910 SLC29A3Q9BZD2 475 aa17.94■□□□□ 0.46
PSPC1-201ENST00000338910 RANGRFQ9HD47 186 aaPredicted RBP17.94■□□□□ 0.46
PSPC1-201ENST00000338910 ACOXLQ9NUZ1 547 aa17.94■□□□□ 0.46
PSPC1-201ENST00000338910 TAS2R16Q9NYV7 291 aa17.94■□□□□ 0.46
PSPC1-201ENST00000338910 SLC16A5O15375 505 aa17.94■□□□□ 0.46
PSPC1-201ENST00000338910 LINC01565O15544 149 aa17.94■□□□□ 0.46
PSPC1-201ENST00000338910 CYP7B1O75881 506 aa17.94■□□□□ 0.46
PSPC1-201ENST00000338910 ENGP17813 658 aa17.94■□□□□ 0.46
PSPC1-201ENST00000338910 GPX2P18283 190 aa17.94■□□□□ 0.46
PSPC1-201ENST00000338910 RRM2P31350 389 aa17.94■□□□□ 0.46
PSPC1-201ENST00000338910 BAK1Q16611 211 aa17.94■□□□□ 0.46
PSPC1-201ENST00000338910 ZMAT1Q5H9K5 638 aa17.94■□□□□ 0.46
PSPC1-201ENST00000338910 CEP78Q5JTW2 689 aa17.94■□□□□ 0.46
PSPC1-201ENST00000338910 C9orf64Q5T6V5 341 aa17.94■□□□□ 0.46
PSPC1-201ENST00000338910 TMEM220Q6QAJ8 160 aa17.94■□□□□ 0.46
PSPC1-201ENST00000338910 ZNF605Q86T29 641 aa17.94■□□□□ 0.46
PSPC1-201ENST00000338910 CADM2Q8N3J6 435 aa17.94■□□□□ 0.46
PSPC1-201ENST00000338910 CPA6Q8N4T0 437 aa17.94■□□□□ 0.46
PSPC1-201ENST00000338910 TMEM159Q96B96 161 aa17.94■□□□□ 0.46
PSPC1-201ENST00000338910 OR5M11Q96RB7 305 aa17.94■□□□□ 0.46
PSPC1-201ENST00000338910 RPRD1BQ9NQG5 326 aaKnown RBP17.94■□□□□ 0.46
PSPC1-201ENST00000338910 TMEM184CQ9NVA4 438 aa17.94■□□□□ 0.46
PSPC1-201ENST00000338910 PCDHGB3Q9Y5G1 929 aa17.94■□□□□ 0.46
PSPC1-201ENST00000338910 ICMTO60725 284 aa17.93■□□□□ 0.46
PSPC1-201ENST00000338910 PRNPP04156 253 aa17.93■□□□□ 0.46
PSPC1-201ENST00000338910 PRPS2P11908 318 aa17.93■□□□□ 0.46
PSPC1-201ENST00000338910 FCARP24071 287 aa17.93■□□□□ 0.46
PSPC1-201ENST00000338910 IDH2P48735 452 aaKnown RBP17.93■□□□□ 0.46
PSPC1-201ENST00000338910 GPLD1P80108 840 aa17.93■□□□□ 0.46
PSPC1-201ENST00000338910 SP140Q13342 867 aa17.93■□□□□ 0.46
PSPC1-201ENST00000338910 ZNF79Q15937 498 aa17.93■□□□□ 0.46
PSPC1-201ENST00000338910 GPAT3Q53EU6 434 aa17.93■□□□□ 0.46
PSPC1-201ENST00000338910 OR4F3Q6IEY1 312 aa17.93■□□□□ 0.46
PSPC1-201ENST00000338910 LYPD8Q6UX82 237 aa17.93■□□□□ 0.46
PSPC1-201ENST00000338910 GPR155Q7Z3F1 870 aa17.93■□□□□ 0.46
PSPC1-201ENST00000338910 RNF130Q86XS8 419 aa17.93■□□□□ 0.46
PSPC1-201ENST00000338910 DENND6BQ8NEG7 585 aa17.93■□□□□ 0.46
PSPC1-201ENST00000338910 ASB15Q8WXK1 588 aa17.93■□□□□ 0.46
PSPC1-201ENST00000338910 FEVQ99581 238 aa17.93■□□□□ 0.46
PSPC1-201ENST00000338910 DPH2Q9BQC3 489 aaPredicted RBP17.93■□□□□ 0.46
PSPC1-201ENST00000338910 SLC28A3Q9HAS3 691 aa17.93■□□□□ 0.46
PSPC1-201ENST00000338910 DNAJC11Q9NVH1 559 aa17.93■□□□□ 0.46
PSPC1-201ENST00000338910 GDE1Q9NZC3 331 aa17.93■□□□□ 0.46
PSPC1-201ENST00000338910 PCDHGA2Q9Y5H1 932 aa17.93■□□□□ 0.46
PSPC1-201ENST00000338910 ARHGEF33A8MVX0 844 aa17.93■□□□□ 0.46
PSPC1-201ENST00000338910 K7ESM1 405 aa17.93■□□□□ 0.46
PSPC1-201ENST00000338910 SPINT1O43278 529 aa17.93■□□□□ 0.46
PSPC1-201ENST00000338910 ATG13O75143 517 aa17.93■□□□□ 0.46
PSPC1-201ENST00000338910 SDC1P18827 310 aa17.93■□□□□ 0.46
PSPC1-201ENST00000338910 PRIM2P49643 509 aa17.93■□□□□ 0.46
PSPC1-201ENST00000338910 VASPP50552 380 aaPredicted RBP17.93■□□□□ 0.46
PSPC1-201ENST00000338910 AP1S2P56377 157 aa17.93■□□□□ 0.46
PSPC1-201ENST00000338910 PFN3P60673 137 aa17.93■□□□□ 0.46
PSPC1-201ENST00000338910 KCNJ10P78508 379 aa17.93■□□□□ 0.46
PSPC1-201ENST00000338910 TSTQ16762 297 aaKnown RBP17.93■□□□□ 0.46
PSPC1-201ENST00000338910 CCSMST1Q4G0I0 132 aa17.93■□□□□ 0.46
PSPC1-201ENST00000338910 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.93■□□□□ 0.46
PSPC1-201ENST00000338910 RNF175Q8N4F7 328 aa17.93■□□□□ 0.46
PSPC1-201ENST00000338910 ARRDC3Q96B67 414 aa17.93■□□□□ 0.46
PSPC1-201ENST00000338910 EGLN2Q96KS0 407 aa17.93■□□□□ 0.46
PSPC1-201ENST00000338910 MGLLQ99685 303 aa17.93■□□□□ 0.46
PSPC1-201ENST00000338910 TCF20Q9UGU0 1960 aaKnown RBP17.93■□□□□ 0.46
PSPC1-201ENST00000338910 A0A0G2JMP0 313 aa17.92■□□□□ 0.46
PSPC1-201ENST00000338910 TFECO14948 347 aaPredicted RBP17.92■□□□□ 0.46
PSPC1-201ENST00000338910 GPX5O75715 221 aa17.92■□□□□ 0.46
PSPC1-201ENST00000338910 LRATO95237 230 aa17.92■□□□□ 0.46
PSPC1-201ENST00000338910 IL7P13232 177 aa17.92■□□□□ 0.46
PSPC1-201ENST00000338910 PDHA2P29803 388 aa17.92■□□□□ 0.46
PSPC1-201ENST00000338910 CRYBA2P53672 197 aa17.92■□□□□ 0.46
PSPC1-201ENST00000338910 CSTF3Q12996 717 aaKnown RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms