RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 FBXW10Q5XX13 1052 aa13.96□□□□□ -0.17
CDK5RAP3-201ENST00000338399 DBX2Q6ZNG2 339 aa13.96□□□□□ -0.17
CDK5RAP3-201ENST00000338399 D2HGDHQ8N465 521 aa13.96□□□□□ -0.17
CDK5RAP3-201ENST00000338399 ARHGEF39Q8N4T4 335 aa13.96□□□□□ -0.17
CDK5RAP3-201ENST00000338399 SUMF1Q8NBK3 374 aa13.96□□□□□ -0.17
CDK5RAP3-201ENST00000338399 OR8J3Q8NGG0 315 aa13.96□□□□□ -0.17
CDK5RAP3-201ENST00000338399 OR4A15Q8NGL6 344 aa13.96□□□□□ -0.17
CDK5RAP3-201ENST00000338399 KLHL6Q8WZ60 621 aa13.96□□□□□ -0.17
CDK5RAP3-201ENST00000338399 THUMPD3Q9BV44 507 aaKnown RBP13.96□□□□□ -0.17
CDK5RAP3-201ENST00000338399 SPRTNQ9H040 489 aaPredicted RBP13.96□□□□□ -0.17
CDK5RAP3-201ENST00000338399 IKZF5Q9H5V7 419 aa13.96□□□□□ -0.17
CDK5RAP3-201ENST00000338399 PCDHGB2Q9Y5G2 931 aa13.96□□□□□ -0.17
CDK5RAP3-201ENST00000338399 A0A1W2PRB8 838 aa13.95□□□□□ -0.18
CDK5RAP3-201ENST00000338399 C1orf226A1L170 272 aa13.95□□□□□ -0.18
CDK5RAP3-201ENST00000338399 PDPK1O15530 556 aa13.95□□□□□ -0.18
CDK5RAP3-201ENST00000338399 GALR3O60755 368 aaPredicted RBP13.95□□□□□ -0.18
CDK5RAP3-201ENST00000338399 MED26O95402 600 aa13.95□□□□□ -0.18
CDK5RAP3-201ENST00000338399 ZNF806P0C7X5 589 aa13.95□□□□□ -0.18
CDK5RAP3-201ENST00000338399 DDX5P17844 614 aaKnown RBP13.95□□□□□ -0.18
CDK5RAP3-201ENST00000338399 CPN2P22792 545 aa13.95□□□□□ -0.18
CDK5RAP3-201ENST00000338399 HNRNPFP52597 415 aaKnown RBP13.95□□□□□ -0.18
CDK5RAP3-201ENST00000338399 LIM2P55344 173 aa13.95□□□□□ -0.18
CDK5RAP3-201ENST00000338399 MS4A2Q01362 244 aa13.95□□□□□ -0.18
CDK5RAP3-201ENST00000338399 LIPEQ05469 1076 aa13.95□□□□□ -0.18
CDK5RAP3-201ENST00000338399 LRRC74AQ0VAA2 488 aa13.95□□□□□ -0.18
CDK5RAP3-201ENST00000338399 GPR19Q15760 415 aa13.95□□□□□ -0.18
CDK5RAP3-201ENST00000338399 TCTE1Q5JU00 501 aa13.95□□□□□ -0.18
CDK5RAP3-201ENST00000338399 IFNEQ86WN2 208 aa13.95□□□□□ -0.18
CDK5RAP3-201ENST00000338399 KMT5CQ86Y97 462 aa13.95□□□□□ -0.18
CDK5RAP3-201ENST00000338399 DTWD1Q8N5C7 304 aa13.95□□□□□ -0.18
CDK5RAP3-201ENST00000338399 SLC41A2Q96JW4 573 aa13.95□□□□□ -0.18
CDK5RAP3-201ENST00000338399 CNDP2Q96KP4 475 aaKnown RBP13.95□□□□□ -0.18
CDK5RAP3-201ENST00000338399 C10orf90Q96M02 699 aa13.95□□□□□ -0.18
CDK5RAP3-201ENST00000338399 PCDHAC1Q9H158 963 aa13.95□□□□□ -0.18
CDK5RAP3-201ENST00000338399 ZNF768Q9H5H4 540 aaKnown RBP13.95□□□□□ -0.18
CDK5RAP3-201ENST00000338399 PIF1Q9H611 641 aa13.95□□□□□ -0.18
CDK5RAP3-201ENST00000338399 ANKHQ9HCJ1 492 aa13.95□□□□□ -0.18
CDK5RAP3-201ENST00000338399 KCMF1Q9P0J7 381 aa13.95□□□□□ -0.18
CDK5RAP3-201ENST00000338399 UTS2RQ9UKP6 389 aa13.95□□□□□ -0.18
CDK5RAP3-201ENST00000338399 DAPP1Q9UN19 280 aa13.95□□□□□ -0.18
CDK5RAP3-201ENST00000338399 PCDHGB4Q9UN71 923 aa13.95□□□□□ -0.18
CDK5RAP3-201ENST00000338399 ADAMTS20P59510 1910 aa13.95□□□□□ -0.18
CDK5RAP3-201ENST00000338399 HYKKA2RU49 373 aa13.95□□□□□ -0.18
CDK5RAP3-201ENST00000338399 TMEM150CB9EJG8 249 aa13.95□□□□□ -0.18
CDK5RAP3-201ENST00000338399 SGK494L7N484 410 aa13.95□□□□□ -0.18
CDK5RAP3-201ENST00000338399 C1QCP02747 245 aa13.95□□□□□ -0.18
CDK5RAP3-201ENST00000338399 NELFEP18615 380 aaKnown RBP13.95□□□□□ -0.18
CDK5RAP3-201ENST00000338399 GSK3BP49841 420 aa13.95□□□□□ -0.18
CDK5RAP3-201ENST00000338399 ACTR3P61158 418 aa13.95□□□□□ -0.18
CDK5RAP3-201ENST00000338399 HBA1P69905 142 aa13.95□□□□□ -0.18
CDK5RAP3-201ENST00000338399 NDUFA9Q16795 377 aa13.95□□□□□ -0.18
CDK5RAP3-201ENST00000338399 SHISA5Q8N114 240 aa13.95□□□□□ -0.18
CDK5RAP3-201ENST00000338399 OR5T3Q8NGG3 340 aa13.95□□□□□ -0.18
CDK5RAP3-201ENST00000338399 OR9A4Q8NGU2 314 aa13.95□□□□□ -0.18
CDK5RAP3-201ENST00000338399 RHBDD1Q8TEB9 315 aa13.95□□□□□ -0.18
CDK5RAP3-201ENST00000338399 ATOH1Q92858 354 aaPredicted RBP13.95□□□□□ -0.18
CDK5RAP3-201ENST00000338399 ZNF764Q96H86 408 aaPredicted RBP13.95□□□□□ -0.18
CDK5RAP3-201ENST00000338399 ECSITQ9BQ95 431 aa13.95□□□□□ -0.18
CDK5RAP3-201ENST00000338399 CPPED1Q9BRF8 314 aaPredicted RBP13.95□□□□□ -0.18
CDK5RAP3-201ENST00000338399 ALG2Q9H553 416 aa13.95□□□□□ -0.18
CDK5RAP3-201ENST00000338399 SLAMF7Q9NQ25 335 aa13.95□□□□□ -0.18
CDK5RAP3-201ENST00000338399 TAS2R7Q9NYW3 318 aa13.95□□□□□ -0.18
CDK5RAP3-201ENST00000338399 EHD3Q9NZN3 535 aa13.95□□□□□ -0.18
CDK5RAP3-201ENST00000338399 SUCOQ9UBS9 1254 aaKnown RBP13.95□□□□□ -0.18
CDK5RAP3-201ENST00000338399 PHF11Q9UIL8 331 aa13.95□□□□□ -0.18
CDK5RAP3-201ENST00000338399 A0A0A6YYC8 382 aaPredicted RBP13.94□□□□□ -0.18
CDK5RAP3-201ENST00000338399 I3L1I5 382 aaPredicted RBP13.94□□□□□ -0.18
CDK5RAP3-201ENST00000338399 CDX4O14627 284 aaPredicted RBP13.94□□□□□ -0.18
CDK5RAP3-201ENST00000338399 TOX3O15405 576 aaPredicted RBP13.94□□□□□ -0.18
CDK5RAP3-201ENST00000338399 ERAL1O75616 437 aaKnown RBP13.94□□□□□ -0.18
CDK5RAP3-201ENST00000338399 LDOC1O95751 146 aaPredicted RBP13.94□□□□□ -0.18
CDK5RAP3-201ENST00000338399 NR2F6P10588 404 aa13.94□□□□□ -0.18
CDK5RAP3-201ENST00000338399 HSD17B1P14061 328 aa13.94□□□□□ -0.18
CDK5RAP3-201ENST00000338399 FOLR1P15328 257 aa13.94□□□□□ -0.18
CDK5RAP3-201ENST00000338399 BUD31P41223 144 aaPredicted RBP13.94□□□□□ -0.18
CDK5RAP3-201ENST00000338399 EEFSECP57772 596 aaKnown RBP13.94□□□□□ -0.18
CDK5RAP3-201ENST00000338399 TNFRSF17Q02223 184 aa13.94□□□□□ -0.18
CDK5RAP3-201ENST00000338399 TCF15Q12870 199 aa13.94□□□□□ -0.18
CDK5RAP3-201ENST00000338399 TRIM25Q14258 630 aaKnown RBP13.94□□□□□ -0.18
CDK5RAP3-201ENST00000338399 INAVAQ3KP66 663 aa13.94□□□□□ -0.18
CDK5RAP3-201ENST00000338399 TMTC4Q5T4D3 741 aa13.94□□□□□ -0.18
CDK5RAP3-201ENST00000338399 CLEC4FQ8N1N0 589 aa13.94□□□□□ -0.18
CDK5RAP3-201ENST00000338399 NATD1Q8N6N6 113 aa13.94□□□□□ -0.18
CDK5RAP3-201ENST00000338399 HIPK4Q8NE63 616 aa13.94□□□□□ -0.18
CDK5RAP3-201ENST00000338399 OR4D9Q8NGE8 314 aa13.94□□□□□ -0.18
CDK5RAP3-201ENST00000338399 CSF3RQ99062 836 aa13.94□□□□□ -0.18
CDK5RAP3-201ENST00000338399 SH3GL1Q99961 368 aa13.94□□□□□ -0.18
CDK5RAP3-201ENST00000338399 LYRM4Q9HD34 91 aa13.94□□□□□ -0.18
CDK5RAP3-201ENST00000338399 SLC35C2Q9NQQ7 365 aa13.94□□□□□ -0.18
CDK5RAP3-201ENST00000338399 CES1P1Q9UKY3 287 aa13.94□□□□□ -0.18
CDK5RAP3-201ENST00000338399 VPS4AQ9UN37 437 aa13.94□□□□□ -0.18
CDK5RAP3-201ENST00000338399 USP22Q9UPT9 525 aa13.94□□□□□ -0.18
CDK5RAP3-201ENST00000338399 CACNA1HO95180 2353 aa13.93□□□□□ -0.18
CDK5RAP3-201ENST00000338399 IGHV5-10-1A0A0J9YXX1 117 aa13.93□□□□□ -0.18
CDK5RAP3-201ENST00000338399 CLIC1O00299 241 aa13.93□□□□□ -0.18
CDK5RAP3-201ENST00000338399 ACOT8O14734 319 aa13.93□□□□□ -0.18
CDK5RAP3-201ENST00000338399 FLRT2O43155 660 aa13.93□□□□□ -0.18
CDK5RAP3-201ENST00000338399 FOXS1O43638 330 aa13.93□□□□□ -0.18
CDK5RAP3-201ENST00000338399 RDH16O75452 317 aa13.93□□□□□ -0.18
CDK5RAP3-201ENST00000338399 CKMT2P17540 419 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms