RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 MN1Q10571 1320 aaPredicted RBP13.91□□□□□ -0.18
CBX3-201ENST00000337620 C1orf226A1L170 272 aa13.91□□□□□ -0.18
CBX3-201ENST00000337620 H0Y3Z8 333 aa13.91□□□□□ -0.18
CBX3-201ENST00000337620 ACOT8O14734 319 aa13.91□□□□□ -0.18
CBX3-201ENST00000337620 DNAJA2O60884 412 aa13.91□□□□□ -0.18
CBX3-201ENST00000337620 ERAL1O75616 437 aaKnown RBP13.91□□□□□ -0.18
CBX3-201ENST00000337620 RPLP0P05388 317 aaKnown RBP13.91□□□□□ -0.18
CBX3-201ENST00000337620 GABRA4P48169 554 aa13.91□□□□□ -0.18
CBX3-201ENST00000337620 MANFP55145 182 aaKnown RBP13.91□□□□□ -0.18
CBX3-201ENST00000337620 RUNX2Q13950 521 aa13.91□□□□□ -0.18
CBX3-201ENST00000337620 SPATS1Q496A3 300 aa13.91□□□□□ -0.18
CBX3-201ENST00000337620 PDSS2Q86YH6 399 aa13.91□□□□□ -0.18
CBX3-201ENST00000337620 CARFQ8N187 725 aa13.91□□□□□ -0.18
CBX3-201ENST00000337620 CLEC4FQ8N1N0 589 aa13.91□□□□□ -0.18
CBX3-201ENST00000337620 BHLHE22Q8NFJ8 381 aaPredicted RBP13.91□□□□□ -0.18
CBX3-201ENST00000337620 SLC26A7Q8TE54 656 aa13.91□□□□□ -0.18
CBX3-201ENST00000337620 NAT6Q93015 286 aa13.91□□□□□ -0.18
CBX3-201ENST00000337620 CPPED1Q9BRF8 314 aaPredicted RBP13.91□□□□□ -0.18
CBX3-201ENST00000337620 VPS4AQ9UN37 437 aa13.91□□□□□ -0.18
CBX3-201ENST00000337620 USP22Q9UPT9 525 aa13.91□□□□□ -0.18
CBX3-201ENST00000337620 EVPLLA8MZ36 301 aa13.9□□□□□ -0.18
CBX3-201ENST00000337620 PRR33A8MZF0 331 aa13.9□□□□□ -0.18
CBX3-201ENST00000337620 CLIC1O00299 241 aa13.9□□□□□ -0.18
CBX3-201ENST00000337620 BCAS2O75934 225 aaPredicted RBP13.9□□□□□ -0.18
CBX3-201ENST00000337620 KRT36O76013 467 aa13.9□□□□□ -0.18
CBX3-201ENST00000337620 STAMBPO95630 424 aa13.9□□□□□ -0.18
CBX3-201ENST00000337620 C1QCP02747 245 aa13.9□□□□□ -0.18
CBX3-201ENST00000337620 CPN2P22792 545 aa13.9□□□□□ -0.18
CBX3-201ENST00000337620 BUD31P41223 144 aaPredicted RBP13.9□□□□□ -0.18
CBX3-201ENST00000337620 HNRNPFP52597 415 aaKnown RBP13.9□□□□□ -0.18
CBX3-201ENST00000337620 LIM2P55344 173 aa13.9□□□□□ -0.18
CBX3-201ENST00000337620 TRAP1Q12931 704 aaKnown RBP13.9□□□□□ -0.18
CBX3-201ENST00000337620 PRTGQ2VWP7 1150 aa13.9□□□□□ -0.18
CBX3-201ENST00000337620 PLA2G2CQ5R387 149 aa13.9□□□□□ -0.18
CBX3-201ENST00000337620 CYP2R1Q6VVX0 501 aa13.9□□□□□ -0.18
CBX3-201ENST00000337620 NATD1Q8N6N6 113 aa13.9□□□□□ -0.18
CBX3-201ENST00000337620 IFI44Q8TCB0 444 aa13.9□□□□□ -0.18
CBX3-201ENST00000337620 CHRNA10Q9GZZ6 450 aa13.9□□□□□ -0.18
CBX3-201ENST00000337620 ANKHQ9HCJ1 492 aa13.9□□□□□ -0.18
CBX3-201ENST00000337620 TAS2R9Q9NYW1 312 aa13.9□□□□□ -0.18
CBX3-201ENST00000337620 EHD3Q9NZN3 535 aa13.9□□□□□ -0.18
CBX3-201ENST00000337620 BCAP29Q9UHQ4 241 aa13.9□□□□□ -0.18
CBX3-201ENST00000337620 PHF11Q9UIL8 331 aa13.9□□□□□ -0.18
CBX3-201ENST00000337620 A0A1W2PQM1 296 aa13.9□□□□□ -0.18
CBX3-201ENST00000337620 SGK494L7N484 410 aa13.9□□□□□ -0.18
CBX3-201ENST00000337620 GALR3O60755 368 aaPredicted RBP13.9□□□□□ -0.18
CBX3-201ENST00000337620 PSMG1O95456 288 aa13.9□□□□□ -0.18
CBX3-201ENST00000337620 NR2F6P10588 404 aa13.9□□□□□ -0.18
CBX3-201ENST00000337620 CKMT1AP12532 417 aa13.9□□□□□ -0.18
CBX3-201ENST00000337620 PROX2Q3B8N5 592 aa13.9□□□□□ -0.18
CBX3-201ENST00000337620 TMEM71Q6P5X7 295 aa13.9□□□□□ -0.18
CBX3-201ENST00000337620 TMPRSS9Q7Z410 1059 aa13.9□□□□□ -0.18
CBX3-201ENST00000337620 DHFR2Q86XF0 187 aa13.9□□□□□ -0.18
CBX3-201ENST00000337620 OR5T3Q8NGG3 340 aa13.9□□□□□ -0.18
CBX3-201ENST00000337620 OR9A4Q8NGU2 314 aa13.9□□□□□ -0.18
CBX3-201ENST00000337620 PNPT1Q8TCS8 783 aaKnown RBP13.9□□□□□ -0.18
CBX3-201ENST00000337620 ZNF583Q96ND8 569 aa13.9□□□□□ -0.18
CBX3-201ENST00000337620 SPRTNQ9H040 489 aaPredicted RBP13.9□□□□□ -0.18
CBX3-201ENST00000337620 KAT8Q9H7Z6 458 aaKnown RBP13.9□□□□□ -0.18
CBX3-201ENST00000337620 SLAMF7Q9NQ25 335 aa13.9□□□□□ -0.18
CBX3-201ENST00000337620 SLC35C2Q9NQQ7 365 aa13.9□□□□□ -0.18
CBX3-201ENST00000337620 TAS2R7Q9NYW3 318 aa13.9□□□□□ -0.18
CBX3-201ENST00000337620 KCMF1Q9P0J7 381 aa13.9□□□□□ -0.18
CBX3-201ENST00000337620 ZNF282Q9UDV7 671 aaPredicted RBP13.9□□□□□ -0.18
CBX3-201ENST00000337620 DAPP1Q9UN19 280 aa13.9□□□□□ -0.18
CBX3-201ENST00000337620 LNP1A1A4G5 178 aa13.89□□□□□ -0.19
CBX3-201ENST00000337620 CPNE6O95741 557 aa13.89□□□□□ -0.19
CBX3-201ENST00000337620 NTRK1P04629 796 aa13.89□□□□□ -0.19
CBX3-201ENST00000337620 ZCCHC18P0CG32 403 aa13.89□□□□□ -0.19
CBX3-201ENST00000337620 TLX1P31314 330 aaPredicted RBP13.89□□□□□ -0.19
CBX3-201ENST00000337620 SOAT1P35610 550 aa13.89□□□□□ -0.19
CBX3-201ENST00000337620 DUSP3P51452 185 aaPredicted RBP13.89□□□□□ -0.19
CBX3-201ENST00000337620 OR4D2P58180 307 aa13.89□□□□□ -0.19
CBX3-201ENST00000337620 BNIP2Q12982 314 aa13.89□□□□□ -0.19
CBX3-201ENST00000337620 SLC14A1Q13336 389 aa13.89□□□□□ -0.19
CBX3-201ENST00000337620 GAB1Q13480 694 aa13.89□□□□□ -0.19
CBX3-201ENST00000337620 GPR19Q15760 415 aa13.89□□□□□ -0.19
CBX3-201ENST00000337620 NDUFA9Q16795 377 aa13.89□□□□□ -0.19
CBX3-201ENST00000337620 TCTE1Q5JU00 501 aa13.89□□□□□ -0.19
CBX3-201ENST00000337620 LAIR1Q6GTX8 287 aa13.89□□□□□ -0.19
CBX3-201ENST00000337620 SLC48A1Q6P1K1 146 aa13.89□□□□□ -0.19
CBX3-201ENST00000337620 ZNF551Q7Z340 670 aaPredicted RBP13.89□□□□□ -0.19
CBX3-201ENST00000337620 PRSS42Q7Z5A4 293 aa13.89□□□□□ -0.19
CBX3-201ENST00000337620 SPATA24Q86W54 205 aa13.89□□□□□ -0.19
CBX3-201ENST00000337620 DTWD1Q8N5C7 304 aa13.89□□□□□ -0.19
CBX3-201ENST00000337620 TRIML2Q8N7C3 387 aa13.89□□□□□ -0.19
CBX3-201ENST00000337620 GOT1L1Q8NHS2 421 aaPredicted RBP13.89□□□□□ -0.19
CBX3-201ENST00000337620 PYDC1Q8WXC3 89 aa13.89□□□□□ -0.19
CBX3-201ENST00000337620 KLHL6Q8WZ60 621 aa13.89□□□□□ -0.19
CBX3-201ENST00000337620 JADE3Q92613 823 aa13.89□□□□□ -0.19
CBX3-201ENST00000337620 FAM120BQ96EK7 910 aaKnown RBP13.89□□□□□ -0.19
CBX3-201ENST00000337620 ZNF764Q96H86 408 aaPredicted RBP13.89□□□□□ -0.19
CBX3-201ENST00000337620 LRGUKQ96M69 825 aa13.89□□□□□ -0.19
CBX3-201ENST00000337620 PHF12Q96QT6 1004 aa13.89□□□□□ -0.19
CBX3-201ENST00000337620 BBS4Q96RK4 519 aa13.89□□□□□ -0.19
CBX3-201ENST00000337620 LRRN3Q9H3W5 708 aa13.89□□□□□ -0.19
CBX3-201ENST00000337620 TPT1P8Q9HAU6 139 aa13.89□□□□□ -0.19
CBX3-201ENST00000337620 CLCA2Q9UQC9 943 aa13.89□□□□□ -0.19
CBX3-201ENST00000337620 AP3M1Q9Y2T2 418 aa13.89□□□□□ -0.19
CBX3-201ENST00000337620 SNX8Q9Y5X2 465 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms