RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 AIF1LQ9BQI0 150 aa7.87□□□□□ -1.15
HPS4-201ENST00000336873 HDHD5Q9BXW7 423 aa7.87□□□□□ -1.15
HPS4-201ENST00000336873 ITPAQ9BY32 194 aa7.87□□□□□ -1.15
HPS4-201ENST00000336873 SLC2A11Q9BYW1 496 aa7.87□□□□□ -1.15
HPS4-201ENST00000336873 TM9SF3Q9HD45 589 aa7.87□□□□□ -1.15
HPS4-201ENST00000336873 IL1RAPQ9NPH3 570 aa7.87□□□□□ -1.15
HPS4-201ENST00000336873 C8orf4Q9NR00 106 aa7.87□□□□□ -1.15
HPS4-201ENST00000336873 CNIH4Q9P003 139 aa7.87□□□□□ -1.15
HPS4-201ENST00000336873 GPC6Q9Y625 555 aaPredicted RBP7.87□□□□□ -1.15
HPS4-201ENST00000336873 SDK2Q58EX2 2172 aa7.87□□□□□ -1.15
HPS4-201ENST00000336873 TRPM6Q9BX84 2022 aa7.87□□□□□ -1.15
HPS4-201ENST00000336873 LRRC72A6NJI9 287 aa7.87□□□□□ -1.15
HPS4-201ENST00000336873 ANHXE9PGG2 379 aa7.87□□□□□ -1.15
HPS4-201ENST00000336873 KIAA0513O60268 411 aa7.87□□□□□ -1.15
HPS4-201ENST00000336873 RASGRP1O95267 797 aa7.87□□□□□ -1.15
HPS4-201ENST00000336873 RPLP0P05388 317 aaKnown RBP7.87□□□□□ -1.15
HPS4-201ENST00000336873 MRPL3P09001 348 aaKnown RBP7.87□□□□□ -1.15
HPS4-201ENST00000336873 IFI30P13284 250 aa7.87□□□□□ -1.15
HPS4-201ENST00000336873 C6P13671 934 aa7.87□□□□□ -1.15
HPS4-201ENST00000336873 TIA1P31483 386 aaKnown RBP eCLIP7.87□□□□□ -1.15
HPS4-201ENST00000336873 LIPAP38571 399 aa7.87□□□□□ -1.15
HPS4-201ENST00000336873 CLK3P49761 638 aaKnown RBP7.87□□□□□ -1.15
HPS4-201ENST00000336873 XKP51811 444 aa7.87□□□□□ -1.15
HPS4-201ENST00000336873 ACVR1Q04771 509 aa7.87□□□□□ -1.15
HPS4-201ENST00000336873 KRT73Q86Y46 540 aa7.87□□□□□ -1.15
HPS4-201ENST00000336873 CPA6Q8N4T0 437 aa7.87□□□□□ -1.15
HPS4-201ENST00000336873 FAM83FQ8NEG4 500 aaPredicted RBP7.87□□□□□ -1.15
HPS4-201ENST00000336873 BPIFB1Q8TDL5 484 aa7.87□□□□□ -1.15
HPS4-201ENST00000336873 LMLNQ96KR4 655 aa7.87□□□□□ -1.15
HPS4-201ENST00000336873 DOHHQ9BU89 302 aa7.87□□□□□ -1.15
HPS4-201ENST00000336873 SIRT5Q9NXA8 310 aa7.87□□□□□ -1.15
HPS4-201ENST00000336873 TAS2R9Q9NYW1 312 aa7.87□□□□□ -1.15
HPS4-201ENST00000336873 ZNF624Q9P2J8 865 aaPredicted RBP7.87□□□□□ -1.15
HPS4-201ENST00000336873 TEKT2Q9UIF3 430 aa7.87□□□□□ -1.15
HPS4-201ENST00000336873 SLC6A14Q9UN76 642 aa7.87□□□□□ -1.15
HPS4-201ENST00000336873 CLCA3PQ9Y6N3 262 aa7.87□□□□□ -1.15
HPS4-201ENST00000336873 NPIPA5A0A0B4J1W7 369 aa7.87□□□□□ -1.15
HPS4-201ENST00000336873 FAM183AA6NL82 134 aa7.87□□□□□ -1.15
HPS4-201ENST00000336873 NPIPA7E9PJI5 369 aa7.87□□□□□ -1.15
HPS4-201ENST00000336873 AREL1O15033 823 aa7.87□□□□□ -1.15
HPS4-201ENST00000336873 ZW10O43264 779 aa7.87□□□□□ -1.15
HPS4-201ENST00000336873 LRRTM2O43300 516 aa7.87□□□□□ -1.15
HPS4-201ENST00000336873 SOCS5O75159 536 aa7.87□□□□□ -1.15
HPS4-201ENST00000336873 SBF1O95248 1867 aa7.87□□□□□ -1.15
HPS4-201ENST00000336873 RB1P06400 928 aa7.87□□□□□ -1.15
HPS4-201ENST00000336873 CCNYL3P0C7X3 344 aa7.87□□□□□ -1.15
HPS4-201ENST00000336873 NPIPA8P0DM63 369 aa7.87□□□□□ -1.15
HPS4-201ENST00000336873 ADH5P11766 374 aa7.87□□□□□ -1.15
HPS4-201ENST00000336873 CD72P21854 359 aa7.87□□□□□ -1.15
HPS4-201ENST00000336873 IMPA1P29218 277 aa7.87□□□□□ -1.15
HPS4-201ENST00000336873 NTSP30990 170 aa7.87□□□□□ -1.15
HPS4-201ENST00000336873 RGS8P57771 180 aaPredicted RBP7.87□□□□□ -1.15
HPS4-201ENST00000336873 PFN3P60673 137 aa7.87□□□□□ -1.15
HPS4-201ENST00000336873 ISL1P61371 349 aa7.87□□□□□ -1.15
HPS4-201ENST00000336873 ADARB1P78563 741 aaKnown RBP7.87□□□□□ -1.15
HPS4-201ENST00000336873 SYPL1Q16563 259 aa7.87□□□□□ -1.15
HPS4-201ENST00000336873 CCDC157Q569K6 752 aa7.87□□□□□ -1.15
HPS4-201ENST00000336873 SNAP47Q5SQN1 464 aa7.87□□□□□ -1.15
HPS4-201ENST00000336873 C22orf42Q6IC83 251 aa7.87□□□□□ -1.15
HPS4-201ENST00000336873 ERICH5Q6P6B1 374 aa7.87□□□□□ -1.15
HPS4-201ENST00000336873 BRAT1Q6PJG6 821 aa7.87□□□□□ -1.15
HPS4-201ENST00000336873 PARS2Q7L3T8 475 aaKnown RBP7.87□□□□□ -1.15
HPS4-201ENST00000336873 AKAP14Q86UN6 197 aa7.87□□□□□ -1.15
HPS4-201ENST00000336873 METTL27Q8N6F8 245 aaPredicted RBP7.87□□□□□ -1.15
HPS4-201ENST00000336873 SUN5Q8TC36 379 aa7.87□□□□□ -1.15
HPS4-201ENST00000336873 ADAMTS15Q8TE58 950 aa7.87□□□□□ -1.15
HPS4-201ENST00000336873 TSPEARQ8WU66 669 aa7.87□□□□□ -1.15
HPS4-201ENST00000336873 GATAD2BQ8WXI9 593 aa7.87□□□□□ -1.15
HPS4-201ENST00000336873 DEPDC7Q96QD5 511 aa7.87□□□□□ -1.15
HPS4-201ENST00000336873 ZSCAN5AQ9BUG6 496 aa7.87□□□□□ -1.15
HPS4-201ENST00000336873 WDR12Q9GZL7 423 aaKnown RBP7.87□□□□□ -1.15
HPS4-201ENST00000336873 SPNS1Q9H2V7 528 aa7.87□□□□□ -1.15
HPS4-201ENST00000336873 REEP4Q9H6H4 257 aa7.87□□□□□ -1.15
HPS4-201ENST00000336873 ZNF282Q9UDV7 671 aaPredicted RBP7.87□□□□□ -1.15
HPS4-201ENST00000336873 BRCA1P38398 1863 aaKnown RBP7.86□□□□□ -1.15
HPS4-201ENST00000336873 UNC13CQ8NB66 2214 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 NOTOA8MTQ0 251 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 PDPK1O15530 556 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 PRAMEF4O60810 478 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 PTHP01270 115 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 IGLV3-27P01718 113 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 FGBP02675 491 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 CLTBP09497 229 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 ITGA2P17301 1181 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 CELP19835 753 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 GSTM2P28161 218 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 PPM1AP35813 382 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 SUOXP51687 545 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 CLDN2P57739 230 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 IL18Q14116 193 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 MRPL58Q14197 206 aaKnown RBP7.86□□□□□ -1.15
HPS4-201ENST00000336873 HEPACAMQ14CZ8 416 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 DHCR24Q15392 516 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 PRAMEF9Q5VWM5 478 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 TRIQKQ629K1 86 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 LHX8Q68G74 356 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 LIPIQ6XZB0 460 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 MACC1Q6ZN28 852 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 PRR23CQ6ZRP0 262 aa7.86□□□□□ -1.15
HPS4-201ENST00000336873 DEPDC4Q8N2C3 294 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms