RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 RAPSNQ13702 412 aa11.98□□□□□ -0.49
LIMK1-201ENST00000336180 GPR107Q5VW38 600 aa11.98□□□□□ -0.49
LIMK1-201ENST00000336180 GPR153Q6NV75 609 aa11.98□□□□□ -0.49
LIMK1-201ENST00000336180 ABRAXAS1Q6UWZ7 409 aa11.98□□□□□ -0.49
LIMK1-201ENST00000336180 RBM45Q8IUH3 476 aaKnown RBP11.98□□□□□ -0.49
LIMK1-201ENST00000336180 ADHFE1Q8IWW8 467 aa11.98□□□□□ -0.49
LIMK1-201ENST00000336180 CCDC116Q8IYX3 515 aa11.98□□□□□ -0.49
LIMK1-201ENST00000336180 SLC44A3Q8N4M1 653 aa11.98□□□□□ -0.49
LIMK1-201ENST00000336180 HORMAD2Q8N7B1 307 aa11.98□□□□□ -0.49
LIMK1-201ENST00000336180 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.98□□□□□ -0.495e-8■■■□□ 17.3
LIMK1-201ENST00000336180 ABTB1Q969K4 478 aaPredicted RBP11.98□□□□□ -0.49
LIMK1-201ENST00000336180 TAMM41Q96BW9 452 aa11.98□□□□□ -0.49
LIMK1-201ENST00000336180 COQ8BQ96D53 544 aa11.98□□□□□ -0.49
LIMK1-201ENST00000336180 KCNC2Q96PR1 638 aa11.98□□□□□ -0.49
LIMK1-201ENST00000336180 SUV39H1O43463 412 aa11.97□□□□□ -0.49
LIMK1-201ENST00000336180 MAGP20916 626 aa11.97□□□□□ -0.49
LIMK1-201ENST00000336180 GPC1P35052 558 aa11.97□□□□□ -0.49
LIMK1-201ENST00000336180 RAB28P51157 221 aa11.97□□□□□ -0.49
LIMK1-201ENST00000336180 CDH12P55289 794 aa11.97□□□□□ -0.49
LIMK1-201ENST00000336180 PHEXP78562 749 aa11.97□□□□□ -0.49
LIMK1-201ENST00000336180 GRSF1Q12849 480 aaKnown RBP eCLIP11.97□□□□□ -0.49
LIMK1-201ENST00000336180 ENPP2Q13822 863 aa11.97□□□□□ -0.49
LIMK1-201ENST00000336180 CPZQ66K79 652 aa11.97□□□□□ -0.49
LIMK1-201ENST00000336180 OR2T5Q6IEZ7 315 aa11.97□□□□□ -0.49
LIMK1-201ENST00000336180 KLHL17Q6TDP4 642 aa11.97□□□□□ -0.49
LIMK1-201ENST00000336180 CEACAM20Q6UY09 585 aa11.97□□□□□ -0.49
LIMK1-201ENST00000336180 PRR23BQ6ZRT6 265 aa11.97□□□□□ -0.49
LIMK1-201ENST00000336180 KCTD8Q6ZWB6 473 aa11.97□□□□□ -0.49
LIMK1-201ENST00000336180 ZNF438Q7Z4V0 828 aa11.97□□□□□ -0.49
LIMK1-201ENST00000336180 R3HCC1LQ7Z5L2 792 aaKnown RBP11.97□□□□□ -0.49
LIMK1-201ENST00000336180 SERPINA11Q86U17 422 aa11.97□□□□□ -0.49
LIMK1-201ENST00000336180 SIX5Q8N196 739 aa11.97□□□□□ -0.49
LIMK1-201ENST00000336180 SYNPOQ8N3V7 929 aa11.97□□□□□ -0.49
LIMK1-201ENST00000336180 ZCCHC7Q8N3Z6 543 aaKnown RBP11.97□□□□□ -0.49
LIMK1-201ENST00000336180 OR2T29Q8NH02 315 aa11.97□□□□□ -0.49
LIMK1-201ENST00000336180 HAUS8Q9BT25 410 aa11.97□□□□□ -0.49
LIMK1-201ENST00000336180 ARMC7Q9H6L4 198 aa11.97□□□□□ -0.49
LIMK1-201ENST00000336180 CAPN10Q9HC96 672 aa11.97□□□□□ -0.49
LIMK1-201ENST00000336180 ZNF624Q9P2J8 865 aaPredicted RBP11.97□□□□□ -0.49
LIMK1-201ENST00000336180 TMEFF2Q9UIK5 374 aaPredicted RBP11.97□□□□□ -0.49
LIMK1-201ENST00000336180 GPR37L1O60883 481 aa11.97□□□□□ -0.49
LIMK1-201ENST00000336180 VIPP01282 170 aa11.97□□□□□ -0.49
LIMK1-201ENST00000336180 RETP07949 1114 aa11.97□□□□□ -0.49
LIMK1-201ENST00000336180 HSD3B1P14060 373 aa11.97□□□□□ -0.49
LIMK1-201ENST00000336180 TYRP1P17643 537 aa11.97□□□□□ -0.49
LIMK1-201ENST00000336180 IGFBP5P24593 272 aa11.97□□□□□ -0.49
LIMK1-201ENST00000336180 HSD3B2P26439 372 aa11.97□□□□□ -0.49
LIMK1-201ENST00000336180 EIF2DP41214 584 aaKnown RBP11.97□□□□□ -0.49
LIMK1-201ENST00000336180 CD47Q08722 323 aa11.97□□□□□ -0.49
LIMK1-201ENST00000336180 PRRT3Q5FWE3 981 aa11.97□□□□□ -0.49
LIMK1-201ENST00000336180 LAIR1Q6GTX8 287 aa11.97□□□□□ -0.49
LIMK1-201ENST00000336180 LPCAT2Q7L5N7 544 aa11.97□□□□□ -0.49
LIMK1-201ENST00000336180 DCP2Q8IU60 420 aaKnown RBP11.97□□□□□ -0.49
LIMK1-201ENST00000336180 CHCHD4Q8N4Q1 142 aa11.97□□□□□ -0.49
LIMK1-201ENST00000336180 OXR1Q8N573 874 aa11.97□□□□□ -0.49
LIMK1-201ENST00000336180 FBXO15Q8NCQ5 510 aaPredicted RBP11.97□□□□□ -0.49
LIMK1-201ENST00000336180 OR13H1Q8NG92 308 aa11.97□□□□□ -0.49
LIMK1-201ENST00000336180 OR9Q2Q8NGE9 314 aa11.97□□□□□ -0.49
LIMK1-201ENST00000336180 XAGE5Q8WWM1 108 aa11.97□□□□□ -0.49
LIMK1-201ENST00000336180 RSPO3Q9BXY4 272 aaPredicted RBP11.97□□□□□ -0.49
LIMK1-201ENST00000336180 TAS2R9Q9NYW1 312 aa11.97□□□□□ -0.49
LIMK1-201ENST00000336180 CA14Q9ULX7 337 aa11.97□□□□□ -0.49
LIMK1-201ENST00000336180 ATG4BQ9Y4P1 393 aa11.97□□□□□ -0.49
LIMK1-201ENST00000336180 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.96□□□□□ -0.49
LIMK1-201ENST00000336180 TMEM229AB2RXF0 380 aa11.96□□□□□ -0.49
LIMK1-201ENST00000336180 FOXE1O00358 373 aaPredicted RBP11.96□□□□□ -0.49
LIMK1-201ENST00000336180 AP1G1O43747 822 aa11.96□□□□□ -0.49
LIMK1-201ENST00000336180 NTN1O95631 604 aa11.96□□□□□ -0.49
LIMK1-201ENST00000336180 GABRG2P18507 467 aa11.96□□□□□ -0.49
LIMK1-201ENST00000336180 PPP2R2BQ00005 443 aa11.96□□□□□ -0.49
LIMK1-201ENST00000336180 PRDX1Q06830 199 aaKnown RBP11.96□□□□□ -0.49
LIMK1-201ENST00000336180 GPR19Q15760 415 aa11.96□□□□□ -0.49
LIMK1-201ENST00000336180 DUSP7Q16829 419 aa11.96□□□□□ -0.49
LIMK1-201ENST00000336180 DPY19L1Q2PZI1 675 aa11.96□□□□□ -0.49
LIMK1-201ENST00000336180 TOR1AIP1Q5JTV8 583 aa11.96□□□□□ -0.49
LIMK1-201ENST00000336180 ANXA8L1Q5VT79 327 aa11.96□□□□□ -0.49
LIMK1-201ENST00000336180 TSEN54Q7Z6J9 526 aaKnown RBP11.96□□□□□ -0.49
LIMK1-201ENST00000336180 FAM9CQ8IZT9 166 aa11.96□□□□□ -0.49
LIMK1-201ENST00000336180 C11orf65Q8NCR3 313 aa11.96□□□□□ -0.49
LIMK1-201ENST00000336180 PPP1R14BQ96C90 147 aa11.96□□□□□ -0.49
LIMK1-201ENST00000336180 OR2M4Q96R27 311 aa11.96□□□□□ -0.49
LIMK1-201ENST00000336180 THUMPD1Q9NXG2 353 aaKnown RBP11.96□□□□□ -0.49
LIMK1-201ENST00000336180 KLF15Q9UIH9 416 aa11.96□□□□□ -0.49
LIMK1-201ENST00000336180 SAMD4AQ9UPU9 718 aaKnown RBP11.96□□□□□ -0.49
LIMK1-201ENST00000336180 NPIPB8E9PQR5 432 aa11.96□□□□□ -0.49
LIMK1-201ENST00000336180 CTSBP07858 339 aa11.96□□□□□ -0.49
LIMK1-201ENST00000336180 SLC5A2P31639 672 aa11.96□□□□□ -0.49
LIMK1-201ENST00000336180 SLAMF1Q13291 335 aa11.96□□□□□ -0.49
LIMK1-201ENST00000336180 DEFB110Q30KQ9 67 aa11.96□□□□□ -0.49
LIMK1-201ENST00000336180 GCNT6Q5T4J0 391 aa11.96□□□□□ -0.49
LIMK1-201ENST00000336180 COL13A1Q5TAT6 717 aaPredicted RBP11.96□□□□□ -0.49
LIMK1-201ENST00000336180 NDUFAF5Q5TEU4 345 aa11.96□□□□□ -0.49
LIMK1-201ENST00000336180 Q6ZSR6 202 aa11.96□□□□□ -0.49
LIMK1-201ENST00000336180 PATL1Q86TB9 770 aaKnown RBP11.96□□□□□ -0.49
LIMK1-201ENST00000336180 GTPBP3Q969Y2 492 aaKnown RBP11.96□□□□□ -0.49
LIMK1-201ENST00000336180 TMEM45AQ9NWC5 275 aa11.96□□□□□ -0.49
LIMK1-201ENST00000336180 SLC6A14Q9UN76 642 aa11.96□□□□□ -0.49
LIMK1-201ENST00000336180 NCKAP1Q9Y2A7 1128 aa11.96□□□□□ -0.49
LIMK1-201ENST00000336180 ABCA7Q8IZY2 2146 aa11.96□□□□□ -0.5
LIMK1-201ENST00000336180 TNFRSF4P43489 277 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms