RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 IFT52Q9Y366 437 aa14.38□□□□□ -0.11
C9orf47-201ENST00000334490 GPC6Q9Y625 555 aaPredicted RBP14.38□□□□□ -0.11
C9orf47-201ENST00000334490 N4BP2Q86UW6 1770 aaPredicted RBP14.38□□□□□ -0.11
C9orf47-201ENST00000334490 SOX1O00570 391 aaPredicted RBP14.38□□□□□ -0.11
C9orf47-201ENST00000334490 LYNP07948 512 aa14.38□□□□□ -0.11
C9orf47-201ENST00000334490 ETS2P15036 469 aa14.38□□□□□ -0.11
C9orf47-201ENST00000334490 FMO3P31513 532 aa14.38□□□□□ -0.11
C9orf47-201ENST00000334490 CCR7P32248 378 aa14.38□□□□□ -0.11
C9orf47-201ENST00000334490 SMSP52788 366 aa14.38□□□□□ -0.11
C9orf47-201ENST00000334490 CLDN8P56748 225 aa14.38□□□□□ -0.11
C9orf47-201ENST00000334490 KRT74Q7RTS7 529 aa14.38□□□□□ -0.11
C9orf47-201ENST00000334490 UBE2J2Q8N2K1 259 aa14.38□□□□□ -0.11
C9orf47-201ENST00000334490 BBS10Q8TAM1 723 aa14.38□□□□□ -0.11
C9orf47-201ENST00000334490 L3HYPDHQ96EM0 354 aa14.38□□□□□ -0.11
C9orf47-201ENST00000334490 POLR2J2Q9GZM3 115 aaKnown RBP14.38□□□□□ -0.11
C9orf47-201ENST00000334490 MARCH7Q9H992 704 aa14.38□□□□□ -0.11
C9orf47-201ENST00000334490 SOBPA7XYQ1 873 aa14.38□□□□□ -0.11
C9orf47-201ENST00000334490 GPR89AB7ZAQ6 455 aa14.38□□□□□ -0.11
C9orf47-201ENST00000334490 IDH3BO43837 385 aa14.38□□□□□ -0.11
C9orf47-201ENST00000334490 GPR89BP0CG08 455 aa14.38□□□□□ -0.11
C9orf47-201ENST00000334490 OTX2P32243 289 aa14.38□□□□□ -0.11
C9orf47-201ENST00000334490 CTHP32929 405 aa14.38□□□□□ -0.11
C9orf47-201ENST00000334490 ARSFP54793 590 aa14.38□□□□□ -0.11
C9orf47-201ENST00000334490 DENND5AQ6IQ26 1287 aa14.38□□□□□ -0.11
C9orf47-201ENST00000334490 ZNF550Q7Z398 422 aa14.38□□□□□ -0.11
C9orf47-201ENST00000334490 CHERPQ8IWX8 916 aaKnown RBP14.38□□□□□ -0.11
C9orf47-201ENST00000334490 TMEM234Q8WY98 164 aa14.38□□□□□ -0.11
C9orf47-201ENST00000334490 UHRF1Q96T88 793 aaPredicted RBP14.38□□□□□ -0.11
C9orf47-201ENST00000334490 TSSK6Q9BXA6 273 aa14.38□□□□□ -0.11
C9orf47-201ENST00000334490 CEP290O15078 2479 aa14.37□□□□□ -0.11
C9orf47-201ENST00000334490 ASNA1O43681 348 aa14.37□□□□□ -0.11
C9orf47-201ENST00000334490 CYB5AP00167 134 aa14.37□□□□□ -0.11
C9orf47-201ENST00000334490 NR2C1P13056 603 aa14.37□□□□□ -0.11
C9orf47-201ENST00000334490 SLC6A9P48067 706 aa14.37□□□□□ -0.11
C9orf47-201ENST00000334490 RPS26P62854 115 aaKnown RBP14.37□□□□□ -0.11
C9orf47-201ENST00000334490 DUSP6Q16828 381 aa14.37□□□□□ -0.11
C9orf47-201ENST00000334490 C9orf50Q5SZB4 431 aa14.37□□□□□ -0.11
C9orf47-201ENST00000334490 DEFB123Q8N688 67 aa14.37□□□□□ -0.11
C9orf47-201ENST00000334490 CHST4Q8NCG5 386 aa14.37□□□□□ -0.11
C9orf47-201ENST00000334490 OR2L2Q8NH16 312 aa14.37□□□□□ -0.11
C9orf47-201ENST00000334490 LINC01599Q8WXQ3 324 aa14.37□□□□□ -0.11
C9orf47-201ENST00000334490 NT5C3BQ969T7 300 aa14.37□□□□□ -0.11
C9orf47-201ENST00000334490 DGCR14Q96DF8 476 aaKnown RBP14.37□□□□□ -0.11
C9orf47-201ENST00000334490 ZBTB20Q9HC78 741 aaPredicted RBP14.37□□□□□ -0.11
C9orf47-201ENST00000334490 EPHA6Q9UF33 1036 aa14.37□□□□□ -0.11
C9orf47-201ENST00000334490 SERPINA3P01011 423 aa14.37□□□□□ -0.11
C9orf47-201ENST00000334490 PDHA2P29803 388 aa14.37□□□□□ -0.11
C9orf47-201ENST00000334490 MXD1Q05195 221 aa14.37□□□□□ -0.11
C9orf47-201ENST00000334490 NFATC4Q14934 902 aa14.37□□□□□ -0.11
C9orf47-201ENST00000334490 TRAM2Q15035 370 aa14.37□□□□□ -0.11
C9orf47-201ENST00000334490 VMACQ2NL98 169 aa14.37□□□□□ -0.11
C9orf47-201ENST00000334490 ATG9BQ674R7 924 aa14.37□□□□□ -0.11
C9orf47-201ENST00000334490 GRHL2Q6ISB3 625 aa14.37□□□□□ -0.11
C9orf47-201ENST00000334490 OR52E1Q8NGJ3 308 aa14.37□□□□□ -0.11
C9orf47-201ENST00000334490 OR51I1Q9H343 314 aa14.37□□□□□ -0.11
C9orf47-201ENST00000334490 PELI2Q9HAT8 420 aa14.37□□□□□ -0.11
C9orf47-201ENST00000334490 ABCB9Q9NP78 766 aa14.37□□□□□ -0.11
C9orf47-201ENST00000334490 PRSS21Q9Y6M0 314 aa14.37□□□□□ -0.11
C9orf47-201ENST00000334490 POLR1CO15160 346 aaPredicted RBP14.37□□□□□ -0.11
C9orf47-201ENST00000334490 BCAT2O15382 392 aaPredicted RBP14.37□□□□□ -0.11
C9orf47-201ENST00000334490 AIREO43918 545 aa14.37□□□□□ -0.11
C9orf47-201ENST00000334490 CLEC3AO75596 197 aa14.37□□□□□ -0.11
C9orf47-201ENST00000334490 SOX14O95416 240 aa14.37□□□□□ -0.11
C9orf47-201ENST00000334490 ATXN1LP0C7T5 689 aaKnown RBP14.37□□□□□ -0.11
C9orf47-201ENST00000334490 CRTC2Q53ET0 693 aaPredicted RBP14.37□□□□□ -0.11
C9orf47-201ENST00000334490 HDDC2Q7Z4H3 204 aa14.37□□□□□ -0.11
C9orf47-201ENST00000334490 HMGN2P46Q86SG4 172 aa14.37□□□□□ -0.11
C9orf47-201ENST00000334490 P2RY8Q86VZ1 359 aa14.37□□□□□ -0.11
C9orf47-201ENST00000334490 C7orf57Q8NEG2 295 aa14.37□□□□□ -0.11
C9orf47-201ENST00000334490 OR8J3Q8NGG0 315 aa14.37□□□□□ -0.11
C9orf47-201ENST00000334490 OR5L2Q8NGL0 311 aa14.37□□□□□ -0.11
C9orf47-201ENST00000334490 ARRDC3Q96B67 414 aa14.37□□□□□ -0.11
C9orf47-201ENST00000334490 EVPLQ92817 2033 aa14.37□□□□□ -0.11
C9orf47-201ENST00000334490 ZNF821O75541 412 aaPredicted RBP14.36□□□□□ -0.11
C9orf47-201ENST00000334490 BCAS2O75934 225 aaPredicted RBP14.36□□□□□ -0.11
C9orf47-201ENST00000334490 HBQ1P09105 142 aa14.36□□□□□ -0.11
C9orf47-201ENST00000334490 PRKACGP22612 351 aa14.36□□□□□ -0.11
C9orf47-201ENST00000334490 CBLP22681 906 aa14.36□□□□□ -0.11
C9orf47-201ENST00000334490 PBX2P40425 430 aa14.36□□□□□ -0.11
C9orf47-201ENST00000334490 KIR2DS3Q14952 304 aa14.36□□□□□ -0.11
C9orf47-201ENST00000334490 LAPTM4AQ15012 233 aa14.36□□□□□ -0.11
C9orf47-201ENST00000334490 RBM12BQ8IXT5 1001 aaKnown RBP14.36□□□□□ -0.11
C9orf47-201ENST00000334490 ZNF676Q8N7Q3 588 aa14.36□□□□□ -0.11
C9orf47-201ENST00000334490 ASB16Q96NS5 453 aa14.36□□□□□ -0.11
C9orf47-201ENST00000334490 GFRA2O00451 464 aa14.36□□□□□ -0.11
C9orf47-201ENST00000334490 CSNK1EP49674 416 aaKnown RBP14.36□□□□□ -0.11
C9orf47-201ENST00000334490 RNF144AP50876 292 aaPredicted RBP14.36□□□□□ -0.11
C9orf47-201ENST00000334490 CDKL4Q5MAI5 379 aa14.36□□□□□ -0.11
C9orf47-201ENST00000334490 NDUFAF5Q5TEU4 345 aa14.36□□□□□ -0.11
C9orf47-201ENST00000334490 KIAA0895LQ68EN5 471 aa14.36□□□□□ -0.11
C9orf47-201ENST00000334490 FAM131AQ6UXB0 335 aa14.36□□□□□ -0.11
C9orf47-201ENST00000334490 ZNF551Q7Z340 670 aaPredicted RBP14.36□□□□□ -0.11
C9orf47-201ENST00000334490 FANCFQ9NPI8 374 aa14.36□□□□□ -0.11
C9orf47-201ENST00000334490 C14orf105Q9NVL8 296 aa14.36□□□□□ -0.11
C9orf47-201ENST00000334490 OBP2AQ9NY56 170 aa14.36□□□□□ -0.11
C9orf47-201ENST00000334490 H7C0S8 307 aa14.36□□□□□ -0.11
C9orf47-201ENST00000334490 C1SP09871 688 aa14.36□□□□□ -0.11
C9orf47-201ENST00000334490 ITGA3P26006 1051 aa14.36□□□□□ -0.11
C9orf47-201ENST00000334490 RBBP4Q09028 425 aa14.36□□□□□ -0.11
C9orf47-201ENST00000334490 PON3Q15166 354 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms