RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 CFL2Q9Y281 166 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 NOSIPQ9Y314 301 aaKnown RBP1.38□□□□□ -2.19
LINC00643-201ENST00000334389 NF1P21359 2839 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 ASXL3Q9C0F0 2248 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 MED13Q9UHV7 2174 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 NSG1A0A0A6YYJ2 146 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 ARGFXA6NJG6 315 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 OOSP1A8MZH6 123 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 H0YHG0 523 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 ADAMDEC1O15204 470 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 AKAP10O43572 662 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 SGTAO43765 313 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 PEX1O43933 1283 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 PRPSAP2O60256 369 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 CSPG5O95196 566 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 IL2RAP01589 272 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 TPM2P07951 284 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 RHOCP08134 193 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 GSPT1P15170 499 aaKnown RBP1.37□□□□□ -2.19
LINC00643-201ENST00000334389 SELEP16581 610 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 ZNF24P17028 368 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 FGFR4P22455 802 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 UQCRC2P22695 453 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 PRTN3P24158 256 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 NSG1P42857 185 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 IDH3GP51553 393 aaPredicted RBP1.37□□□□□ -2.19
LINC00643-201ENST00000334389 EFNB2P52799 333 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 DGKQP52824 942 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 C21orf58P58505 322 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 TAS2R39P59534 338 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 TNP2Q05952 138 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 FOXE3Q13461 319 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 KEAP1Q14145 624 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 RABEP1Q15276 862 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 OR1C1Q15619 314 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 NSDHLQ15738 373 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 DPYSL2Q16555 572 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 DEFB133Q30KQ1 61 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 PRR30Q53SZ7 412 aaPredicted RBP1.37□□□□□ -2.19
LINC00643-201ENST00000334389 LY6G6FQ5SQ64 297 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 C10orf120Q5SQS8 335 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 CDKAL1Q5VV42 579 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 GPR139Q6DWJ6 353 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 FBXL22Q6P050 247 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 ZCCHC12Q6PEW1 402 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 DARS2Q6PI48 645 aaKnown RBP1.37□□□□□ -2.19
LINC00643-201ENST00000334389 C5orf46Q6UWT4 87 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 C1orf229Q6ZS94 237 aaPredicted RBP1.37□□□□□ -2.19
LINC00643-201ENST00000334389 CHST3Q7LGC8 479 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 OR4E2Q8NGC2 313 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 FAM76AQ8TAV0 307 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 AGAP11Q8TF27 550 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 DDI1Q8WTU0 396 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 RNF139Q8WU17 664 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 UBTD2Q8WUN7 234 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 ART4Q93070 314 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 GLYATL1Q969I3 302 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 CCDC47Q96A33 483 aaKnown RBP1.37□□□□□ -2.19
LINC00643-201ENST00000334389 C19orf60Q96EN9 201 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 CYFIP2Q96F07 1278 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 B3GALT6Q96L58 329 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 DCLRE1CQ96SD1 692 aaKnown RBP1.37□□□□□ -2.19
LINC00643-201ENST00000334389 SEPHS2Q99611 448 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 SF3B5Q9BWJ5 86 aaKnown RBP1.37□□□□□ -2.19
LINC00643-201ENST00000334389 CAPS2Q9BXY5 557 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 PROK2Q9HC23 129 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 IARS2Q9NSE4 1012 aaKnown RBP1.37□□□□□ -2.19
LINC00643-201ENST00000334389 DNAI1Q9UI46 699 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 UTS2RQ9UKP6 389 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 NOX1Q9Y5S8 564 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 EPPK1P58107 5090 aaKnown RBP1.37□□□□□ -2.19
LINC00643-201ENST00000334389 MED13LQ71F56 2210 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 IGLV3-9A0A075B6K5 115 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 ELOA3CA0A087WX78 387 aaPredicted RBP1.37□□□□□ -2.19
LINC00643-201ENST00000334389 TUBAL3A6NHL2 446 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 SRRM4A7MD48 611 aaKnown RBP1.37□□□□□ -2.19
LINC00643-201ENST00000334389 BTNL10A8MVZ5 291 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 J3KR12 359 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 NPHS1O60500 1241 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 UGDHO60701 494 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 ERCC1P07992 297 aaPredicted RBP1.37□□□□□ -2.19
LINC00643-201ENST00000334389 COX5BP10606 129 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 PTMSP20962 102 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 UGT1A1P22309 533 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 ALAS2P22557 587 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 PTPN3P26045 913 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 HOXD13P35453 343 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 HMGCLP35914 325 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 GPR15P49685 360 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 NPEPPSP55786 919 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 YWHAZP63104 245 aaKnown RBP1.37□□□□□ -2.19
LINC00643-201ENST00000334389 RBBP7Q16576 425 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 KRT39Q6A163 491 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 FAAH2Q6GMR7 532 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 OR7E24Q6IFN5 339 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 KRTAP5-11Q6L8G4 156 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 ARHGAP36Q6ZRI8 547 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 TPGS1Q6ZTW0 290 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 FOXL2NBQ6ZUU3 175 aa1.37□□□□□ -2.19
LINC00643-201ENST00000334389 TAC4Q86UU9 113 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms