RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 CNOT11Q9UKZ1 510 aaKnown RBP11.31□□□□□ -0.6
HDAC6-201ENST00000334136 PCDHGA11Q9Y5H2 935 aa11.31□□□□□ -0.6
HDAC6-201ENST00000334136 PRSS21Q9Y6M0 314 aa11.31□□□□□ -0.6
HDAC6-201ENST00000334136 SESN1Q9Y6P5 492 aa11.31□□□□□ -0.6
HDAC6-201ENST00000334136 KRBA1A5PL33 1030 aa11.3□□□□□ -0.6
HDAC6-201ENST00000334136 H0Y8X5 98 aa11.3□□□□□ -0.6
HDAC6-201ENST00000334136 SSNA1O43805 119 aa11.3□□□□□ -0.6
HDAC6-201ENST00000334136 TLX1P31314 330 aaPredicted RBP11.3□□□□□ -0.6
HDAC6-201ENST00000334136 SSR2P43308 183 aa11.3□□□□□ -0.6
HDAC6-201ENST00000334136 GANABQ14697 944 aaKnown RBP11.3□□□□□ -0.6
HDAC6-201ENST00000334136 PHF19Q5T6S3 580 aa11.3□□□□□ -0.6
HDAC6-201ENST00000334136 HENMT1Q5T8I9 393 aaKnown RBP11.3□□□□□ -0.6
HDAC6-201ENST00000334136 TRIM40Q6P9F5 258 aa11.3□□□□□ -0.6
HDAC6-201ENST00000334136 FAM129CQ86XR2 697 aa11.3□□□□□ -0.6
HDAC6-201ENST00000334136 DPP10Q8N608 796 aa11.3□□□□□ -0.6
HDAC6-201ENST00000334136 STARD8Q92502 1023 aa11.3□□□□□ -0.6
HDAC6-201ENST00000334136 ZIM2Q9NZV7 527 aa11.3□□□□□ -0.6
HDAC6-201ENST00000334136 AASSQ9UDR5 926 aa11.3□□□□□ -0.6
HDAC6-201ENST00000334136 GTF2A1LQ9UNN4 478 aa11.3□□□□□ -0.6
HDAC6-201ENST00000334136 TMED5Q9Y3A6 229 aa11.3□□□□□ -0.6
HDAC6-201ENST00000334136 ZNF451Q9Y4E5 1061 aa11.3□□□□□ -0.6
HDAC6-201ENST00000334136 SPAG17Q6Q759 2223 aa11.3□□□□□ -0.6
HDAC6-201ENST00000334136 FABP12A6NFH5 140 aa11.3□□□□□ -0.6
HDAC6-201ENST00000334136 TRIM64CA6NLI5 447 aa11.3□□□□□ -0.6
HDAC6-201ENST00000334136 K7ESM1 405 aa11.3□□□□□ -0.6
HDAC6-201ENST00000334136 CLIC1O00299 241 aa11.3□□□□□ -0.6
HDAC6-201ENST00000334136 ANXA4P09525 319 aaPredicted RBP11.3□□□□□ -0.6
HDAC6-201ENST00000334136 PRKAR1AP10644 381 aa11.3□□□□□ -0.6
HDAC6-201ENST00000334136 ITIH1P19827 911 aa11.3□□□□□ -0.6
HDAC6-201ENST00000334136 PLA2G16P53816 162 aa11.3□□□□□ -0.6
HDAC6-201ENST00000334136 UGT2B15P54855 530 aa11.3□□□□□ -0.6
HDAC6-201ENST00000334136 HHEXQ03014 270 aa11.3□□□□□ -0.6
HDAC6-201ENST00000334136 GALNT10Q86SR1 603 aa11.3□□□□□ -0.6
HDAC6-201ENST00000334136 CHERPQ8IWX8 916 aaKnown RBP11.3□□□□□ -0.6
HDAC6-201ENST00000334136 HDAC2Q92769 488 aaKnown RBP11.3□□□□□ -0.6
HDAC6-201ENST00000334136 BBS4Q96RK4 519 aa11.3□□□□□ -0.6
HDAC6-201ENST00000334136 IER2Q9BTL4 223 aa11.3□□□□□ -0.6
HDAC6-201ENST00000334136 POLR2J2Q9GZM3 115 aaKnown RBP11.3□□□□□ -0.6
HDAC6-201ENST00000334136 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.3□□□□□ -0.6
HDAC6-201ENST00000334136 PCDHGB5Q9Y5G0 923 aa11.3□□□□□ -0.6
HDAC6-201ENST00000334136 HTR3EA5X5Y0 456 aa11.3□□□□□ -0.6
HDAC6-201ENST00000334136 OR6C70A6NIJ9 312 aa11.3□□□□□ -0.6
HDAC6-201ENST00000334136 OR52A4PA6NMU1 304 aa11.3□□□□□ -0.6
HDAC6-201ENST00000334136 H0YJX3 145 aa11.3□□□□□ -0.6
HDAC6-201ENST00000334136 BCAS1O75363 584 aaPredicted RBP11.3□□□□□ -0.6
HDAC6-201ENST00000334136 SLC35G6P0C7Q6 338 aa11.3□□□□□ -0.6
HDAC6-201ENST00000334136 GSTT2P0CG29 244 aa11.3□□□□□ -0.6
HDAC6-201ENST00000334136 GSTT2BP0CG30 244 aa11.3□□□□□ -0.6
HDAC6-201ENST00000334136 NR2F1P10589 423 aa11.3□□□□□ -0.6
HDAC6-201ENST00000334136 CD1DP15813 335 aa11.3□□□□□ -0.6
HDAC6-201ENST00000334136 ALAS2P22557 587 aa11.3□□□□□ -0.6
HDAC6-201ENST00000334136 HOXD12P35452 270 aa11.3□□□□□ -0.6
HDAC6-201ENST00000334136 USP43Q70EL4 1123 aa11.3□□□□□ -0.6
HDAC6-201ENST00000334136 THOC6Q86W42 341 aaKnown RBP11.3□□□□□ -0.6
HDAC6-201ENST00000334136 PSD4Q8NDX1 1056 aa11.3□□□□□ -0.6
HDAC6-201ENST00000334136 SRFBP1Q8NEF9 429 aaKnown RBP11.3□□□□□ -0.6
HDAC6-201ENST00000334136 JPH3Q8WXH2 748 aaPredicted RBP11.3□□□□□ -0.6
HDAC6-201ENST00000334136 IL17FQ96PD4 163 aa11.3□□□□□ -0.6
HDAC6-201ENST00000334136 TIGARQ9NQ88 270 aa11.3□□□□□ -0.6
HDAC6-201ENST00000334136 KLHL28Q9NXS3 571 aa11.3□□□□□ -0.6
HDAC6-201ENST00000334136 ANGPT4Q9Y264 503 aa11.3□□□□□ -0.6
HDAC6-201ENST00000334136 ARID1BQ8NFD5 2236 aaPredicted RBP11.3□□□□□ -0.6
HDAC6-201ENST00000334136 A0A1W2PPC4 97 aa11.29□□□□□ -0.6
HDAC6-201ENST00000334136 A0A1W2PQ72 361 aa11.29□□□□□ -0.6
HDAC6-201ENST00000334136 EIF3FO00303 357 aaPredicted RBP11.29□□□□□ -0.6
HDAC6-201ENST00000334136 SLC16A5O15375 505 aa11.29□□□□□ -0.6
HDAC6-201ENST00000334136 MT-ND2P03891 347 aa11.29□□□□□ -0.6
HDAC6-201ENST00000334136 CCR7P32248 378 aa11.29□□□□□ -0.6
HDAC6-201ENST00000334136 PRLHRP49683 370 aa11.29□□□□□ -0.6
HDAC6-201ENST00000334136 CCR8P51685 355 aa11.29□□□□□ -0.6
HDAC6-201ENST00000334136 FOXA1P55317 472 aa11.29□□□□□ -0.6
HDAC6-201ENST00000334136 CD47Q08722 323 aa11.29□□□□□ -0.6
HDAC6-201ENST00000334136 USP53Q70EK8 1073 aa11.29□□□□□ -0.6
HDAC6-201ENST00000334136 CNTN4Q8IWV2 1026 aa11.29□□□□□ -0.6
HDAC6-201ENST00000334136 GALNT12Q8IXK2 581 aa11.29□□□□□ -0.6
HDAC6-201ENST00000334136 IZUMO1Q8IYV9 350 aa11.29□□□□□ -0.6
HDAC6-201ENST00000334136 MINDY1Q8N5J2 469 aa11.29□□□□□ -0.6
HDAC6-201ENST00000334136 MFSD2AQ8NA29 543 aa11.29□□□□□ -0.6
HDAC6-201ENST00000334136 OR2L2Q8NH16 312 aa11.29□□□□□ -0.6
HDAC6-201ENST00000334136 CD200R1Q8TD46 325 aa11.29□□□□□ -0.6
HDAC6-201ENST00000334136 RHBDD1Q8TEB9 315 aa11.29□□□□□ -0.6
HDAC6-201ENST00000334136 TRNT1Q96Q11 434 aaKnown RBP11.29□□□□□ -0.6
HDAC6-201ENST00000334136 TIMM29Q9BSF4 260 aa11.29□□□□□ -0.6
HDAC6-201ENST00000334136 EFCAB11Q9BUY7 163 aa11.29□□□□□ -0.6
HDAC6-201ENST00000334136 TMEM168Q9H0V1 697 aa11.29□□□□□ -0.6
HDAC6-201ENST00000334136 IRF2BPLQ9H1B7 796 aa11.29□□□□□ -0.6
HDAC6-201ENST00000334136 PAK1IP1Q9NWT1 392 aaPredicted RBP11.29□□□□□ -0.6
HDAC6-201ENST00000334136 RNF11Q9Y3C5 154 aa11.29□□□□□ -0.6
HDAC6-201ENST00000334136 PCDHB11Q9Y5F2 797 aa11.29□□□□□ -0.6
HDAC6-201ENST00000334136 METTL12A8MUP2 240 aa11.29□□□□□ -0.6
HDAC6-201ENST00000334136 ADAM23O75077 832 aa11.29□□□□□ -0.6
HDAC6-201ENST00000334136 OXSR1O95747 527 aaPredicted RBP11.29□□□□□ -0.6
HDAC6-201ENST00000334136 CER1O95813 267 aa11.29□□□□□ -0.6
HDAC6-201ENST00000334136 SMIM18P0DKX4 95 aa11.29□□□□□ -0.6
HDAC6-201ENST00000334136 PAGE3Q5JUK9 113 aa11.29□□□□□ -0.6
HDAC6-201ENST00000334136 PPCDCQ96CD2 204 aa11.29□□□□□ -0.6
HDAC6-201ENST00000334136 COQ10AQ96MF6 247 aa11.29□□□□□ -0.6
HDAC6-201ENST00000334136 OLAHQ9NV23 265 aa11.29□□□□□ -0.6
HDAC6-201ENST00000334136 UCKL1Q9NWZ5 548 aa11.29□□□□□ -0.6
HDAC6-201ENST00000334136 SPATA7Q9P0W8 599 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms