RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 SLC7A5P2Q9GIP4 190 aa15.58■□□□□ 0.08
SHOX-201ENST00000334060 PCDHB3Q9Y5E6 796 aa15.58■□□□□ 0.08
SHOX-201ENST00000334060 CLDN16Q9Y5I7 305 aa15.58■□□□□ 0.08
SHOX-201ENST00000334060 B4GALT2O60909 372 aa15.57■□□□□ 0.08
SHOX-201ENST00000334060 F8A1P23610 371 aa15.57■□□□□ 0.08
SHOX-201ENST00000334060 XCR1P46094 333 aa15.57■□□□□ 0.08
SHOX-201ENST00000334060 PLIN5Q00G26 463 aa15.57■□□□□ 0.08
SHOX-201ENST00000334060 ZNF763Q0D2J5 394 aa15.57■□□□□ 0.08
SHOX-201ENST00000334060 FAM53BQ14153 422 aa15.57■□□□□ 0.08
SHOX-201ENST00000334060 CMPK2Q5EBM0 449 aa15.57■□□□□ 0.08
SHOX-201ENST00000334060 C10orf62Q5T681 223 aaPredicted RBP15.57■□□□□ 0.08
SHOX-201ENST00000334060 ARHGAP40Q5TG30 622 aa15.57■□□□□ 0.08
SHOX-201ENST00000334060 FAM71E1Q6IPT2 247 aa15.57■□□□□ 0.08
SHOX-201ENST00000334060 ZCCHC7Q8N3Z6 543 aaKnown RBP15.57■□□□□ 0.08
SHOX-201ENST00000334060 FITM2Q8N6M3 262 aa15.57■□□□□ 0.08
SHOX-201ENST00000334060 POU5F2Q8N7G0 328 aa15.57■□□□□ 0.08
SHOX-201ENST00000334060 COL26A1Q96A83 441 aa15.57■□□□□ 0.08
SHOX-201ENST00000334060 CIDECQ96AQ7 238 aaPredicted RBP15.57■□□□□ 0.08
SHOX-201ENST00000334060 FAM210AQ96ND0 272 aa15.57■□□□□ 0.08
SHOX-201ENST00000334060 SERINC2Q96SA4 455 aa15.57■□□□□ 0.08
SHOX-201ENST00000334060 POLR1BQ9H9Y6 1135 aa15.57■□□□□ 0.08
SHOX-201ENST00000334060 SLAMF7Q9NQ25 335 aa15.57■□□□□ 0.08
SHOX-201ENST00000334060 TXLNGQ9NUQ3 528 aa15.57■□□□□ 0.08
SHOX-201ENST00000334060 TRPC4Q9UBN4 977 aa15.57■□□□□ 0.08
SHOX-201ENST00000334060 MASP2O00187 686 aa15.56■□□□□ 0.08
SHOX-201ENST00000334060 PROM1O43490 865 aa15.56■□□□□ 0.08
SHOX-201ENST00000334060 B3GALT2O43825 422 aa15.56■□□□□ 0.08
SHOX-201ENST00000334060 AHCYL1O43865 530 aa15.56■□□□□ 0.08
SHOX-201ENST00000334060 BRINP1O60477 761 aa15.56■□□□□ 0.08
SHOX-201ENST00000334060 NME6O75414 186 aaPredicted RBP15.56■□□□□ 0.08
SHOX-201ENST00000334060 DLGAP3O95886 979 aa15.56■□□□□ 0.08
SHOX-201ENST00000334060 NKAIN1Q4KMZ8 207 aa15.56■□□□□ 0.08
SHOX-201ENST00000334060 MANEAQ5SRI9 462 aa15.56■□□□□ 0.08
SHOX-201ENST00000334060 FAM198BQ6UWH4 519 aa15.56■□□□□ 0.08
SHOX-201ENST00000334060 RIMKLAQ8IXN7 391 aa15.56■□□□□ 0.08
SHOX-201ENST00000334060 DSELQ8IZU8 1212 aa15.56■□□□□ 0.08
SHOX-201ENST00000334060 VPS33AQ96AX1 596 aa15.56■□□□□ 0.08
SHOX-201ENST00000334060 CCT7Q99832 543 aa15.56■□□□□ 0.08
SHOX-201ENST00000334060 BRINP2Q9C0B6 783 aa15.56■□□□□ 0.08
SHOX-201ENST00000334060 MYLK2Q9H1R3 596 aa15.56■□□□□ 0.08
SHOX-201ENST00000334060 SOX17Q9H6I2 414 aaPredicted RBP15.56■□□□□ 0.08
SHOX-201ENST00000334060 ZNF304Q9HCX3 659 aa15.56■□□□□ 0.08
SHOX-201ENST00000334060 SIRT5Q9NXA8 310 aa15.56■□□□□ 0.08
SHOX-201ENST00000334060 CCDC167Q9P0B6 97 aa15.56■□□□□ 0.08
SHOX-201ENST00000334060 AKAP7Q9P0M2 348 aaPredicted RBP15.56■□□□□ 0.08
SHOX-201ENST00000334060 ARL2BPQ9Y2Y0 163 aa15.56■□□□□ 0.08
SHOX-201ENST00000334060 PCSK5Q92824 1860 aa15.56■□□□□ 0.08
SHOX-201ENST00000334060 ASPDHA6ND91 283 aa15.56■□□□□ 0.08
SHOX-201ENST00000334060 TRABD2BA6NFA1 517 aa15.56■□□□□ 0.08
SHOX-201ENST00000334060 GABRR3A8MPY1 467 aa15.56■□□□□ 0.08
SHOX-201ENST00000334060 FGF17O60258 216 aa15.56■□□□□ 0.08
SHOX-201ENST00000334060 CPNE3O75131 537 aaKnown RBP15.56■□□□□ 0.08
SHOX-201ENST00000334060 MAOAP21397 527 aa15.56■□□□□ 0.08
SHOX-201ENST00000334060 C2orf80Q0P641 193 aa15.56■□□□□ 0.08
SHOX-201ENST00000334060 FAM214AQ32MH5 1076 aa15.56■□□□□ 0.08
SHOX-201ENST00000334060 GARNL3Q5VVW2 1013 aa15.56■□□□□ 0.08
SHOX-201ENST00000334060 CEACAM20Q6UY09 585 aa15.56■□□□□ 0.08
SHOX-201ENST00000334060 DGAT2L6Q6ZPD8 337 aa15.56■□□□□ 0.08
SHOX-201ENST00000334060 GPR180Q86V85 440 aa15.56■□□□□ 0.08
SHOX-201ENST00000334060 TICAM1Q8IUC6 712 aa15.56■□□□□ 0.08
SHOX-201ENST00000334060 ZC3H7AQ8IWR0 971 aaKnown RBP15.56■□□□□ 0.08
SHOX-201ENST00000334060 SIMC1Q8NDZ2 872 aa15.56■□□□□ 0.08
SHOX-201ENST00000334060 TSLPQ969D9 159 aa15.56■□□□□ 0.08
SHOX-201ENST00000334060 ANKRA2Q9H9E1 313 aa15.56■□□□□ 0.08
SHOX-201ENST00000334060 SDR39U1Q9NRG7 319 aaPredicted RBP15.56■□□□□ 0.08
SHOX-201ENST00000334060 ETAA1Q9NY74 926 aa15.56■□□□□ 0.08
SHOX-201ENST00000334060 MRPS18BQ9Y676 258 aaKnown RBP15.56■□□□□ 0.08
SHOX-201ENST00000334060 CACNA1AO00555 2505 aa15.56■□□□□ 0.08
SHOX-201ENST00000334060 TXNDC9O14530 226 aa15.55■□□□□ 0.08
SHOX-201ENST00000334060 LAMP1P11279 417 aa15.55■□□□□ 0.08
SHOX-201ENST00000334060 CDK4P11802 303 aa15.55■□□□□ 0.08
SHOX-201ENST00000334060 CAPN3P20807 821 aa15.55■□□□□ 0.08
SHOX-201ENST00000334060 CPN2P22792 545 aa15.55■□□□□ 0.08
SHOX-201ENST00000334060 ID4P47928 161 aa15.55■□□□□ 0.08
SHOX-201ENST00000334060 NDUFA9Q16795 377 aa15.55■□□□□ 0.08
SHOX-201ENST00000334060 SPRED3Q2MJR0 410 aa15.55■□□□□ 0.08
SHOX-201ENST00000334060 SPANXN4Q5MJ08 99 aa15.55■□□□□ 0.08
SHOX-201ENST00000334060 MLIPQ5VWP3 458 aa15.55■□□□□ 0.08
SHOX-201ENST00000334060 FAAH2Q6GMR7 532 aa15.55■□□□□ 0.08
SHOX-201ENST00000334060 EXOSC8Q96B26 276 aaKnown RBP15.55■□□□□ 0.08
SHOX-201ENST00000334060 ERP27Q96DN0 273 aa15.55■□□□□ 0.08
SHOX-201ENST00000334060 SPDL1Q96EA4 605 aa15.55■□□□□ 0.08
SHOX-201ENST00000334060 SIKE1Q9BRV8 207 aa15.55■□□□□ 0.08
SHOX-201ENST00000334060 CENPKQ9BS16 269 aa15.55■□□□□ 0.08
SHOX-201ENST00000334060 CCDC106Q9BWC9 280 aa15.55■□□□□ 0.08
SHOX-201ENST00000334060 SLC52A3Q9NQ40 469 aa15.55■□□□□ 0.08
SHOX-201ENST00000334060 LANCL2Q9NS86 450 aa15.55■□□□□ 0.08
SHOX-201ENST00000334060 URADA6NGE7 173 aa15.55■□□□□ 0.08
SHOX-201ENST00000334060 CDRT15L2A8MXV6 281 aa15.55■□□□□ 0.08
SHOX-201ENST00000334060 VPS4BO75351 444 aa15.55■□□□□ 0.08
SHOX-201ENST00000334060 FESP07332 822 aa15.55■□□□□ 0.08
SHOX-201ENST00000334060 FBLP22087 321 aaKnown RBP15.55■□□□□ 0.08
SHOX-201ENST00000334060 KLC1Q07866 573 aa15.55■□□□□ 0.08
SHOX-201ENST00000334060 ABHD18Q0P651 414 aa15.55■□□□□ 0.08
SHOX-201ENST00000334060 DSG2Q14126 1118 aa15.55■□□□□ 0.08
SHOX-201ENST00000334060 PUM1Q14671 1186 aaKnown RBP eCLIP15.55■□□□□ 0.08
SHOX-201ENST00000334060 AGKQ53H12 422 aa15.55■□□□□ 0.08
SHOX-201ENST00000334060 SPATA19Q7Z5L4 167 aa15.55■□□□□ 0.08
SHOX-201ENST00000334060 ANKRD46Q86W74 232 aa15.55■□□□□ 0.08
SHOX-201ENST00000334060 KIRREL3Q8IZU9 778 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms