RNA–Protein interactions for RNA: ENST00000329970.7

GTF3C6-201, Transcript of general transcription factor IIIC subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C6, Length 952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C6-201ENST00000329970 CHSY3Q70JA7 882 aa12.64□□□□□ -0.39
GTF3C6-201ENST00000329970 RELL1Q8IUW5 271 aa12.64□□□□□ -0.39
GTF3C6-201ENST00000329970 CHERPQ8IWX8 916 aaKnown RBP12.64□□□□□ -0.39
GTF3C6-201ENST00000329970 EID3Q8N140 333 aa12.64□□□□□ -0.39
GTF3C6-201ENST00000329970 CYP4Z2PQ8N1L4 340 aa12.64□□□□□ -0.39
GTF3C6-201ENST00000329970 TMEM156Q8N614 296 aa12.64□□□□□ -0.39
GTF3C6-201ENST00000329970 CPSF7Q8N684 471 aaKnown RBP12.64□□□□□ -0.39
GTF3C6-201ENST00000329970 ZFP62Q8NB50 900 aaPredicted RBP12.64□□□□□ -0.39
GTF3C6-201ENST00000329970 OR14A16Q8NHC5 309 aa12.64□□□□□ -0.39
GTF3C6-201ENST00000329970 MARVELD3Q96A59 401 aa12.64□□□□□ -0.39
GTF3C6-201ENST00000329970 CMTM7Q96FZ5 175 aa12.64□□□□□ -0.39
GTF3C6-201ENST00000329970 F2RL3Q96RI0 385 aa12.64□□□□□ -0.39
GTF3C6-201ENST00000329970 CSF3RQ99062 836 aa12.64□□□□□ -0.39
GTF3C6-201ENST00000329970 ZDHHC18Q9NUE0 388 aa12.64□□□□□ -0.39
GTF3C6-201ENST00000329970 OPTCQ9UBM4 332 aa12.64□□□□□ -0.39
GTF3C6-201ENST00000329970 FBXW2Q9UKT8 454 aa12.64□□□□□ -0.39
GTF3C6-201ENST00000329970 ACOT9Q9Y305 439 aa12.64□□□□□ -0.39
GTF3C6-201ENST00000329970 MEMO1Q9Y316 297 aa12.64□□□□□ -0.39
GTF3C6-201ENST00000329970 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.64□□□□□ -0.39
GTF3C6-201ENST00000329970 CLCA3PQ9Y6N3 262 aa12.64□□□□□ -0.39
GTF3C6-201ENST00000329970 SPACA6W5XKT8 324 aa12.64□□□□□ -0.39
GTF3C6-201ENST00000329970 CSMD1Q96PZ7 3565 aa12.64□□□□□ -0.39
GTF3C6-201ENST00000329970 TMEM200CA6NKL6 621 aa12.63□□□□□ -0.39
GTF3C6-201ENST00000329970 UBXN8O00124 270 aa12.63□□□□□ -0.39
GTF3C6-201ENST00000329970 EPB42P16452 691 aa12.63□□□□□ -0.39
GTF3C6-201ENST00000329970 HIST1H1TP22492 207 aaPredicted RBP12.63□□□□□ -0.39
GTF3C6-201ENST00000329970 PPP2R1BP30154 601 aa12.63□□□□□ -0.39
GTF3C6-201ENST00000329970 PTGER4P35408 488 aa12.63□□□□□ -0.39
GTF3C6-201ENST00000329970 PIK3CBP42338 1070 aa12.63□□□□□ -0.39
GTF3C6-201ENST00000329970 MSH2P43246 934 aa12.63□□□□□ -0.39
GTF3C6-201ENST00000329970 MEOX1P50221 254 aa12.63□□□□□ -0.39
GTF3C6-201ENST00000329970 ST13P50502 369 aaKnown RBP12.63□□□□□ -0.39
GTF3C6-201ENST00000329970 SSR4P51571 173 aa12.63□□□□□ -0.39
GTF3C6-201ENST00000329970 SMSP52788 366 aa12.63□□□□□ -0.39
GTF3C6-201ENST00000329970 SETDB1Q15047 1291 aa12.63□□□□□ -0.39
GTF3C6-201ENST00000329970 ACAP2Q15057 778 aa12.63□□□□□ -0.39
GTF3C6-201ENST00000329970 TRADDQ15628 312 aa12.63□□□□□ -0.39
GTF3C6-201ENST00000329970 FAM83EQ2M2I3 478 aa12.63□□□□□ -0.39
GTF3C6-201ENST00000329970 RNFT1Q5M7Z0 435 aa12.63□□□□□ -0.39
GTF3C6-201ENST00000329970 DEPDC1Q5TB30 811 aa12.63□□□□□ -0.39
GTF3C6-201ENST00000329970 LIPJQ5W064 366 aa12.63□□□□□ -0.39
GTF3C6-201ENST00000329970 CCDC25Q86WR0 208 aa12.63□□□□□ -0.39
GTF3C6-201ENST00000329970 SULF2Q8IWU5 870 aa12.63□□□□□ -0.39
GTF3C6-201ENST00000329970 CENPLQ8N0S6 344 aaPredicted RBP12.63□□□□□ -0.39
GTF3C6-201ENST00000329970 ACOT4Q8N9L9 421 aa12.63□□□□□ -0.39
GTF3C6-201ENST00000329970 OR7G3Q8NG95 312 aa12.63□□□□□ -0.39
GTF3C6-201ENST00000329970 PTPMT1Q8WUK0 201 aaPredicted RBP12.63□□□□□ -0.39
GTF3C6-201ENST00000329970 NXNL1Q96CM4 212 aa12.63□□□□□ -0.39
GTF3C6-201ENST00000329970 FUT8Q9BYC5 575 aa12.63□□□□□ -0.39
GTF3C6-201ENST00000329970 ALOXE3Q9BYJ1 711 aa12.63□□□□□ -0.39
GTF3C6-201ENST00000329970 PLSCR2Q9NRY7 297 aa12.63□□□□□ -0.39
GTF3C6-201ENST00000329970 MS4A12Q9NXJ0 267 aa12.63□□□□□ -0.39
GTF3C6-201ENST00000329970 PSD3Q9NYI0 1048 aa12.63□□□□□ -0.39
GTF3C6-201ENST00000329970 MYOTQ9UBF9 498 aa12.63□□□□□ -0.39
GTF3C6-201ENST00000329970 TINAGQ9UJW2 476 aa12.63□□□□□ -0.39
GTF3C6-201ENST00000329970 HMX2A2RU54 273 aa12.62□□□□□ -0.39
GTF3C6-201ENST00000329970 SUPT3HB4E1H0 165 aa12.62□□□□□ -0.39
GTF3C6-201ENST00000329970 E9PLN8 166 aa12.62□□□□□ -0.39
GTF3C6-201ENST00000329970 PEX1O43933 1283 aa12.62□□□□□ -0.39
GTF3C6-201ENST00000329970 PRKNO60260 465 aaPredicted RBP12.62□□□□□ -0.39
GTF3C6-201ENST00000329970 SUPT3HO75486 399 aa12.62□□□□□ -0.39
GTF3C6-201ENST00000329970 TUBB4AP04350 444 aa12.62□□□□□ -0.39
GTF3C6-201ENST00000329970 C2P06681 752 aa12.62□□□□□ -0.39
GTF3C6-201ENST00000329970 ESRRAP11474 423 aaPredicted RBP12.62□□□□□ -0.39
GTF3C6-201ENST00000329970 STX4Q12846 297 aa12.62□□□□□ -0.39
GTF3C6-201ENST00000329970 PCBP2Q15366 365 aaKnown RBP eCLIP12.62□□□□□ -0.39
GTF3C6-201ENST00000329970 AP5B1Q2VPB7 878 aa12.62□□□□□ -0.39
GTF3C6-201ENST00000329970 KHDRBS2Q5VWX1 349 aaKnown RBP12.62□□□□□ -0.39
GTF3C6-201ENST00000329970 C8orf74Q6P047 294 aa12.62□□□□□ -0.39
GTF3C6-201ENST00000329970 HSDL2Q6YN16 418 aa12.62□□□□□ -0.39
GTF3C6-201ENST00000329970 CEP128Q6ZU80 1094 aa12.62□□□□□ -0.39
GTF3C6-201ENST00000329970 ZCCHC7Q8N3Z6 543 aaKnown RBP12.62□□□□□ -0.39
GTF3C6-201ENST00000329970 EXT2Q93063 718 aa12.62□□□□□ -0.39
GTF3C6-201ENST00000329970 ISL2Q96A47 359 aa12.62□□□□□ -0.39
GTF3C6-201ENST00000329970 MAPKAP1Q9BPZ7 522 aa12.62□□□□□ -0.39
GTF3C6-201ENST00000329970 VKORC1Q9BQB6 163 aa12.62□□□□□ -0.39
GTF3C6-201ENST00000329970 TSPAN10Q9H1Z9 355 aaPredicted RBP12.62□□□□□ -0.39
GTF3C6-201ENST00000329970 TIMMDC1Q9NPL8 285 aa12.62□□□□□ -0.39
GTF3C6-201ENST00000329970 PPT2Q9UMR5 302 aa12.62□□□□□ -0.39
GTF3C6-201ENST00000329970 PCDHGA11Q9Y5H2 935 aa12.62□□□□□ -0.39
GTF3C6-201ENST00000329970 HCFC1P51610 2035 aa12.61□□□□□ -0.39
GTF3C6-201ENST00000329970 ENO4A6NNW6 628 aa12.61□□□□□ -0.39
GTF3C6-201ENST00000329970 A8MVJ9 347 aa12.61□□□□□ -0.39
GTF3C6-201ENST00000329970 H0YIV9 168 aa12.61□□□□□ -0.39
GTF3C6-201ENST00000329970 PRRG2O14669 202 aa12.61□□□□□ -0.39
GTF3C6-201ENST00000329970 TFECO14948 347 aaPredicted RBP12.61□□□□□ -0.39
GTF3C6-201ENST00000329970 KLHL2O95198 593 aa12.61□□□□□ -0.39
GTF3C6-201ENST00000329970 TGFB1P01137 390 aa12.61□□□□□ -0.39
GTF3C6-201ENST00000329970 IFNA16P05015 189 aa12.61□□□□□ -0.39
GTF3C6-201ENST00000329970 ABOP16442 354 aa12.61□□□□□ -0.39
GTF3C6-201ENST00000329970 HTR1EP28566 365 aa12.61□□□□□ -0.39
GTF3C6-201ENST00000329970 GRNP28799 593 aaKnown RBP12.61□□□□□ -0.39
GTF3C6-201ENST00000329970 PHBP35232 272 aa12.61□□□□□ -0.39
GTF3C6-201ENST00000329970 GMPRP36959 345 aa12.61□□□□□ -0.39
GTF3C6-201ENST00000329970 HK2P52789 917 aa12.61□□□□□ -0.39
GTF3C6-201ENST00000329970 ALDH18A1P54886 795 aaKnown RBP12.61□□□□□ -0.39
GTF3C6-201ENST00000329970 BMPR2Q13873 1038 aa12.61□□□□□ -0.39
GTF3C6-201ENST00000329970 OR4C11Q6IEV9 310 aa12.61□□□□□ -0.39
GTF3C6-201ENST00000329970 MDGA2Q7Z553 956 aa12.61□□□□□ -0.39
GTF3C6-201ENST00000329970 FGD2Q7Z6J4 655 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms