RNA–Protein interactions for RNA: ENST00000328839.3

PPP4R4-202, Transcript of protein phosphatase 4 regulatory subunit 4, humanhuman

TSL 1 (best) BASIC

Gene PPP4R4, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4-202ENST00000328839 CD274Q9NZQ7 290 aa23.25■■□□□ 1.31
PPP4R4-202ENST00000328839 TXNDC16Q9P2K2 825 aa23.25■■□□□ 1.31
PPP4R4-202ENST00000328839 MTO1Q9Y2Z2 717 aaKnown RBP23.25■■□□□ 1.31
PPP4R4-202ENST00000328839 MED13LQ71F56 2210 aa23.24■■□□□ 1.31
PPP4R4-202ENST00000328839 PHGDHO43175 533 aaKnown RBP23.24■■□□□ 1.31
PPP4R4-202ENST00000328839 STK16O75716 305 aa23.24■■□□□ 1.31
PPP4R4-202ENST00000328839 HK2P52789 917 aa23.24■■□□□ 1.31
PPP4R4-202ENST00000328839 PMPCAQ10713 525 aa23.24■■□□□ 1.31
PPP4R4-202ENST00000328839 DOC2AQ14183 400 aa23.24■■□□□ 1.31
PPP4R4-202ENST00000328839 PDK4Q16654 411 aa23.24■■□□□ 1.31
PPP4R4-202ENST00000328839 ZNF750Q32MQ0 723 aa23.24■■□□□ 1.31
PPP4R4-202ENST00000328839 SLC22A16Q86VW1 577 aa23.24■■□□□ 1.31
PPP4R4-202ENST00000328839 CCDC71Q8IV32 467 aaPredicted RBP23.24■■□□□ 1.31
PPP4R4-202ENST00000328839 ZNF321PQ8N8H1 164 aa23.24■■□□□ 1.31
PPP4R4-202ENST00000328839 MORN4Q8NDC4 146 aa23.24■■□□□ 1.31
PPP4R4-202ENST00000328839 TSPAN17Q96FV3 270 aa23.24■■□□□ 1.31
PPP4R4-202ENST00000328839 TTTY12Q9BZ98 90 aa23.24■■□□□ 1.31
PPP4R4-202ENST00000328839 KCNJ16Q9NPI9 418 aa23.24■■□□□ 1.31
PPP4R4-202ENST00000328839 SMYD2Q9NRG4 433 aa23.24■■□□□ 1.31
PPP4R4-202ENST00000328839 ZNF490Q9ULM2 529 aaPredicted RBP23.24■■□□□ 1.31
PPP4R4-202ENST00000328839 C17orf105B2RV13 164 aa23.23■■□□□ 1.31
PPP4R4-202ENST00000328839 E7ESA3 106 aa23.23■■□□□ 1.31
PPP4R4-202ENST00000328839 CCNT2O60583 730 aaKnown RBP23.23■■□□□ 1.31
PPP4R4-202ENST00000328839 PRAMEF4O60810 478 aa23.23■■□□□ 1.31
PPP4R4-202ENST00000328839 LDB3O75112 727 aa23.23■■□□□ 1.31
PPP4R4-202ENST00000328839 S100BP04271 92 aaPredicted RBP23.23■■□□□ 1.31
PPP4R4-202ENST00000328839 KCNC1P48547 511 aa23.23■■□□□ 1.31
PPP4R4-202ENST00000328839 HIST2H2ACQ16777 129 aaPredicted RBP23.23■■□□□ 1.31
PPP4R4-202ENST00000328839 EMC4Q5J8M3 183 aa23.23■■□□□ 1.31
PPP4R4-202ENST00000328839 PRAMEF9Q5VWM5 478 aa23.23■■□□□ 1.31
PPP4R4-202ENST00000328839 HIST2H2AA3Q6FI13 130 aa23.23■■□□□ 1.31
PPP4R4-202ENST00000328839 SULT1C3Q6IMI6 304 aa23.23■■□□□ 1.31
PPP4R4-202ENST00000328839 GK5Q6ZS86 529 aa23.23■■□□□ 1.31
PPP4R4-202ENST00000328839 CREG2Q8IUH2 290 aa23.23■■□□□ 1.31
PPP4R4-202ENST00000328839 OR5M9Q8NGP3 310 aa23.23■■□□□ 1.31
PPP4R4-202ENST00000328839 LILRB4Q8NHJ6 448 aa23.23■■□□□ 1.31
PPP4R4-202ENST00000328839 PTPMT1Q8WUK0 201 aaPredicted RBP23.23■■□□□ 1.31
PPP4R4-202ENST00000328839 KCNC2Q96PR1 638 aa23.23■■□□□ 1.31
PPP4R4-202ENST00000328839 TREX2Q9BQ50 279 aaPredicted RBP23.23■■□□□ 1.31
PPP4R4-202ENST00000328839 MCMBPQ9BTE3 642 aa23.23■■□□□ 1.31
PPP4R4-202ENST00000328839 EFCAB11Q9BUY7 163 aa23.23■■□□□ 1.31
PPP4R4-202ENST00000328839 PRDM7Q9NQW5 492 aa23.23■■□□□ 1.31
PPP4R4-202ENST00000328839 NPDC1Q9NQX5 325 aaPredicted RBP23.23■■□□□ 1.31
PPP4R4-202ENST00000328839 VTI1BQ9UEU0 232 aa23.23■■□□□ 1.31
PPP4R4-202ENST00000328839 SNX24Q9Y343 169 aa23.23■■□□□ 1.31
PPP4R4-202ENST00000328839 TP73O15350 636 aa23.22■■□□□ 1.31
PPP4R4-202ENST00000328839 SH3BGRLO75368 114 aa23.22■■□□□ 1.31
PPP4R4-202ENST00000328839 GGT5P36269 586 aa23.22■■□□□ 1.31
PPP4R4-202ENST00000328839 RPL21P46778 160 aaKnown RBP23.22■■□□□ 1.31
PPP4R4-202ENST00000328839 NUP107P57740 925 aa23.22■■□□□ 1.31
PPP4R4-202ENST00000328839 ID2Q02363 134 aa23.22■■□□□ 1.31
PPP4R4-202ENST00000328839 OR4D1Q15615 310 aa23.22■■□□□ 1.31
PPP4R4-202ENST00000328839 PAGE2BQ5JRK9 111 aa23.22■■□□□ 1.31
PPP4R4-202ENST00000328839 RTL4Q6ZR62 310 aa23.22■■□□□ 1.31
PPP4R4-202ENST00000328839 RGS9BPQ6ZS82 235 aa23.22■■□□□ 1.31
PPP4R4-202ENST00000328839 SLC2A12Q8TD20 617 aa23.22■■□□□ 1.31
PPP4R4-202ENST00000328839 PYROXD1Q8WU10 500 aa23.22■■□□□ 1.31
PPP4R4-202ENST00000328839 KIAA1191Q96A73 305 aa23.22■■□□□ 1.31
PPP4R4-202ENST00000328839 SCYL1Q96KG9 808 aa23.22■■□□□ 1.31
PPP4R4-202ENST00000328839 MAPKAP1Q9BPZ7 522 aa23.22■■□□□ 1.31
PPP4R4-202ENST00000328839 FAM173AQ9BQD7 235 aa23.22■■□□□ 1.31
PPP4R4-202ENST00000328839 ROGDIQ9GZN7 287 aa23.22■■□□□ 1.31
PPP4R4-202ENST00000328839 ZDHHC11Q9H8X9 412 aa23.22■■□□□ 1.31
PPP4R4-202ENST00000328839 PNPLA3Q9NST1 481 aa23.22■■□□□ 1.31
PPP4R4-202ENST00000328839 SPACA6W5XKT8 324 aa23.22■■□□□ 1.31
PPP4R4-202ENST00000328839 C2CD3Q4AC94 2353 aa23.21■■□□□ 1.31
PPP4R4-202ENST00000328839 FOXO6A8MYZ6 492 aa23.21■■□□□ 1.31
PPP4R4-202ENST00000328839 WISP3O95389 354 aaPredicted RBP23.21■■□□□ 1.31
PPP4R4-202ENST00000328839 CD1DP15813 335 aa23.21■■□□□ 1.31
PPP4R4-202ENST00000328839 STMN1P16949 149 aa23.21■■□□□ 1.31
PPP4R4-202ENST00000328839 CD22P20273 847 aa23.21■■□□□ 1.31
PPP4R4-202ENST00000328839 SSTR1P30872 391 aa23.21■■□□□ 1.31
PPP4R4-202ENST00000328839 MSH2P43246 934 aa23.21■■□□□ 1.31
PPP4R4-202ENST00000328839 RNF4P78317 190 aa23.21■■□□□ 1.31
PPP4R4-202ENST00000328839 IRF8Q02556 426 aa23.21■■□□□ 1.31
PPP4R4-202ENST00000328839 ILF2Q12905 390 aaKnown RBP23.21■■□□□ 1.31
PPP4R4-202ENST00000328839 CHIT1Q13231 466 aa23.21■■□□□ 1.31
PPP4R4-202ENST00000328839 LAPTM5Q13571 262 aa23.21■■□□□ 1.31
PPP4R4-202ENST00000328839 SERTAD2Q14140 314 aa23.21■■□□□ 1.31
PPP4R4-202ENST00000328839 GXYLT1Q4G148 440 aa23.21■■□□□ 1.31
PPP4R4-202ENST00000328839 ZNF585AQ6P3V2 769 aa23.21■■□□□ 1.31
PPP4R4-202ENST00000328839 FAM47EQ6ZV65 393 aa23.21■■□□□ 1.31
PPP4R4-202ENST00000328839 ACAD11Q709F0 780 aa23.21■■□□□ 1.31
PPP4R4-202ENST00000328839 OR10Q1Q8NGQ4 319 aa23.21■■□□□ 1.31
PPP4R4-202ENST00000328839 CDKL2Q92772 493 aa23.21■■□□□ 1.31
PPP4R4-202ENST00000328839 SMC6Q96SB8 1091 aa23.21■■□□□ 1.31
PPP4R4-202ENST00000328839 LYRM4Q9HD34 91 aa23.21■■□□□ 1.31
PPP4R4-202ENST00000328839 COPS7AQ9UBW8 275 aa23.21■■□□□ 1.31
PPP4R4-202ENST00000328839 RNF112Q9ULX5 631 aa23.21■■□□□ 1.31
PPP4R4-202ENST00000328839 LIPGQ9Y5X9 500 aa23.21■■□□□ 1.31
PPP4R4-202ENST00000328839 CXorf49A8MYA2 514 aaPredicted RBP23.2■■□□□ 1.3
PPP4R4-202ENST00000328839 CCDC188H7C350 402 aa23.2■■□□□ 1.3
PPP4R4-202ENST00000328839 RTCAO00442 366 aaKnown RBP23.2■■□□□ 1.3
PPP4R4-202ENST00000328839 TOXO94900 526 aa23.2■■□□□ 1.3
PPP4R4-202ENST00000328839 PCNAP12004 261 aa23.2■■□□□ 1.3
PPP4R4-202ENST00000328839 IGFBP2P18065 325 aa23.2■■□□□ 1.3
PPP4R4-202ENST00000328839 CNR1P21554 472 aa23.2■■□□□ 1.3
PPP4R4-202ENST00000328839 MAGEA5P43359 124 aa23.2■■□□□ 1.3
PPP4R4-202ENST00000328839 ATP6V0D1P61421 351 aa23.2■■□□□ 1.3
PPP4R4-202ENST00000328839 CDKL4Q5MAI5 379 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms