RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.62□□□□□ -1.19
CIITA-201ENST00000324288 VPS29Q9UBQ0 182 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 SLC2A6Q9UGQ3 507 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 USP32Q8NFA0 1604 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 FMO6PO60774 539 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 ANXA8P13928 327 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 ACTR1BP42025 376 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 ACTR1AP61163 376 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 RPS26P62854 115 aaKnown RBP7.62□□□□□ -1.19
CIITA-201ENST00000324288 GRIN2CQ14957 1233 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 PRAMEF14Q5SWL7 426 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 PRAMEF13Q5VWM6 474 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 GRHL2Q6ISB3 625 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 LAS2Q8IYD9 372 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 ZNF675Q8TD23 568 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 PLD4Q96BZ4 506 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 P2RX2Q9UBL9 471 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 RIPK3Q9Y572 518 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 C9J4A7 227 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 ATP5A1P25705 553 aaKnown RBP7.62□□□□□ -1.19
CIITA-201ENST00000324288 NNATQ16517 81 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 DCAF12L1Q5VU92 463 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 DCDC5Q6ZRR9 648 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 AGXT2Q9BYV1 514 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 CDC14AQ9UNH5 594 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 PCDHA2Q9Y5H9 948 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 VWDEQ8N2E2 1590 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 ARPC5O15511 151 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 LATS1O95835 1130 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 ARAFP10398 606 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 GK2Q14410 553 aaPredicted RBP7.62□□□□□ -1.19
CIITA-201ENST00000324288 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.62□□□□□ -1.19
CIITA-201ENST00000324288 PDZD9Q8IXQ8 264 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 OR4K1Q8NGD4 311 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 SMARCD2Q92925 531 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 ASB9Q96DX5 294 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 MOCOSQ96EN8 888 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 ORAI3Q9BRQ5 295 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 CXXC1Q9P0U4 656 aaPredicted RBP7.62□□□□□ -1.19
CIITA-201ENST00000324288 ACSL5Q9ULC5 683 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 SLC22A14Q9Y267 594 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 FER1L4A9Z1Z3 1794 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 CEMIPQ8WUJ3 1361 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 GPR25O00155 361 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 RAD1O60671 282 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 AKR1C4P17516 323 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 GSTM2P28161 218 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 SSTR2P30874 369 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 GRIK2Q13002 908 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 WDR45BQ5MNZ6 344 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 RALGAPA1Q6GYQ0 2036 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 SLC39A4Q6P5W5 647 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 SUSD1Q6UWL2 747 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 CARM1Q86X55 608 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 TMEM185AQ8NFB2 350 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 NINJ1Q92982 152 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 HINT2Q9BX68 163 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 A0A1B0GVM2 712 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 BRINP1O60477 761 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 HOXB6P17509 224 aaKnown RBP7.62□□□□□ -1.19
CIITA-201ENST00000324288 EPHA1P21709 976 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 CTHP32929 405 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 RPL26P61254 145 aaKnown RBP7.62□□□□□ -1.19
CIITA-201ENST00000324288 PCBP1Q15365 356 aaKnown RBP eCLIP7.62□□□□□ -1.19
CIITA-201ENST00000324288 SPANXN4Q5MJ08 99 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 RGMBQ6NW40 437 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 ENPP6Q6UWR7 440 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 ANKRD13BQ86YJ7 626 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 SLC44A3Q8N4M1 653 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 FUNDC2Q9BWH2 189 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 PCBD2Q9H0N5 130 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 SRRDQ9UH36 339 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 LAMP5Q9UJQ1 280 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 ADAMTS6Q9UKP5 1117 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 IQGAP1P46940 1657 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 MYOFQ9NZM1 2061 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 HLA-DPB1P04440 258 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 SMPD1P17405 629 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 F8A1P23610 371 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 MPIP34949 423 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 ACVRL1P37023 503 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 BMXP51813 675 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 SFRP4Q6FHJ7 346 aaPredicted RBP7.62□□□□□ -1.19
CIITA-201ENST00000324288 LYSMD3Q7Z3D4 306 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 FBXO22Q8NEZ5 403 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 SDSLQ96GA7 329 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 CYP8B1Q9UNU6 501 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 STXBP5LQ9Y2K9 1186 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 UNC119BA6NIH7 251 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 MEIS3P2A8K0S8 358 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 AKR1C8PQ5T2L2 129 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 STRADAQ7RTN6 431 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 FAM46DQ8NEK8 389 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 GNPDA2Q8TDQ7 276 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 IRS2Q9Y4H2 1338 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 SMIM35A0A1B0GVV1 85 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 MATN3O15232 486 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 RCBTB2O95199 551 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 DRD5P21918 477 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 GDF5P43026 501 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms