RNA–Protein interactions for RNA: ENST00000320936.9

CIRBP-201, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIRBP, Length 1,328 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-201ENST00000320936 BRIX1Q8TDN6 353 aaKnown RBP17.56■□□□□ 0.4
CIRBP-201ENST00000320936 MECRQ9BV79 373 aa17.56■□□□□ 0.4
CIRBP-201ENST00000320936 MRPL1Q9BYD6 325 aaKnown RBP17.56■□□□□ 0.4
CIRBP-201ENST00000320936 STMN4Q9H169 189 aaPredicted RBP17.56■□□□□ 0.4
CIRBP-201ENST00000320936 BRF2Q9HAW0 419 aa17.56■□□□□ 0.4
CIRBP-201ENST00000320936 PNO1Q9NRX1 252 aaKnown RBP17.56■□□□□ 0.4
CIRBP-201ENST00000320936 LYARQ9NX58 379 aaKnown RBP17.56■□□□□ 0.4
CIRBP-201ENST00000320936 PSD3Q9NYI0 1048 aa17.56■□□□□ 0.4
CIRBP-201ENST00000320936 PPT2Q9UMR5 302 aa17.56■□□□□ 0.4
CIRBP-201ENST00000320936 TIMM22Q9Y584 194 aa17.56■□□□□ 0.4
CIRBP-201ENST00000320936 CYR61O00622 381 aa17.55■□□□□ 0.4
CIRBP-201ENST00000320936 CTIFO43310 598 aaKnown RBP17.55■□□□□ 0.4
CIRBP-201ENST00000320936 DPM1O60762 260 aa17.55■□□□□ 0.4
CIRBP-201ENST00000320936 ALDH3A1P30838 453 aa17.55■□□□□ 0.4
CIRBP-201ENST00000320936 BSGP35613 385 aa17.55■□□□□ 0.4
CIRBP-201ENST00000320936 BUD31P41223 144 aaPredicted RBP17.55■□□□□ 0.4
CIRBP-201ENST00000320936 ARFIP1P53367 373 aa17.55■□□□□ 0.4
CIRBP-201ENST00000320936 SOX8P57073 446 aa17.55■□□□□ 0.4
CIRBP-201ENST00000320936 STX4Q12846 297 aa17.55■□□□□ 0.4
CIRBP-201ENST00000320936 KLRB1Q12918 225 aa17.55■□□□□ 0.4
CIRBP-201ENST00000320936 EXT1Q16394 746 aa17.55■□□□□ 0.4
CIRBP-201ENST00000320936 BEND6Q5SZJ8 279 aaPredicted RBP17.55■□□□□ 0.4
CIRBP-201ENST00000320936 LINC00696Q6ZRV3 163 aa17.55■□□□□ 0.4
CIRBP-201ENST00000320936 RIPOR1Q6ZS17 1223 aa17.55■□□□□ 0.4
CIRBP-201ENST00000320936 PAGE2Q7Z2X7 111 aa17.55■□□□□ 0.4
CIRBP-201ENST00000320936 GPR180Q86V85 440 aa17.55■□□□□ 0.4
CIRBP-201ENST00000320936 SCUBE1Q8IWY4 988 aa17.55■□□□□ 0.4
CIRBP-201ENST00000320936 ZCCHC7Q8N3Z6 543 aaKnown RBP17.55■□□□□ 0.4
CIRBP-201ENST00000320936 TM9SF4Q92544 642 aa17.55■□□□□ 0.4
CIRBP-201ENST00000320936 SMAD5Q99717 465 aaKnown RBP17.55■□□□□ 0.4
CIRBP-201ENST00000320936 MFRPQ9BY79 579 aa17.55■□□□□ 0.4
CIRBP-201ENST00000320936 ZNF552Q9H707 407 aaPredicted RBP17.55■□□□□ 0.4
CIRBP-201ENST00000320936 MLXIPLQ9NP71 852 aa17.55■□□□□ 0.4
CIRBP-201ENST00000320936 MS4A12Q9NXJ0 267 aa17.55■□□□□ 0.4
CIRBP-201ENST00000320936 KCMF1Q9P0J7 381 aa17.55■□□□□ 0.4
CIRBP-201ENST00000320936 PTGFRNQ9P2B2 879 aa17.55■□□□□ 0.4
CIRBP-201ENST00000320936 IGKV3D-11A0A0A0MRZ8 115 aa17.54■□□□□ 0.4
CIRBP-201ENST00000320936 TCRBV16S1A1N1A0A5B0 115 aa17.54■□□□□ 0.4
CIRBP-201ENST00000320936 B8ZZF3 427 aa17.54■□□□□ 0.4
CIRBP-201ENST00000320936 UBFD1O14562 309 aaKnown RBP17.54■□□□□ 0.4
CIRBP-201ENST00000320936 IFNA16P05015 189 aa17.54■□□□□ 0.4
CIRBP-201ENST00000320936 KLK1P06870 262 aa17.54■□□□□ 0.4
CIRBP-201ENST00000320936 FAM58BPP0C7Q3 252 aa17.54■□□□□ 0.4
CIRBP-201ENST00000320936 ITGAMP11215 1152 aa17.54■□□□□ 0.4
CIRBP-201ENST00000320936 HTR6P50406 440 aa17.54■□□□□ 0.4
CIRBP-201ENST00000320936 HNRNPH2P55795 449 aaKnown RBP17.54■□□□□ 0.4
CIRBP-201ENST00000320936 TNFRSF17Q02223 184 aa17.54■□□□□ 0.4
CIRBP-201ENST00000320936 ID2Q02363 134 aa17.54■□□□□ 0.4
CIRBP-201ENST00000320936 CSTF3Q12996 717 aaKnown RBP17.54■□□□□ 0.4
CIRBP-201ENST00000320936 PLAG1Q6DJT9 500 aa17.54■□□□□ 0.4
CIRBP-201ENST00000320936 IMMP1LQ96LU5 166 aa17.54■□□□□ 0.4
CIRBP-201ENST00000320936 WDR77Q9BQA1 342 aaPredicted RBP17.54■□□□□ 0.4
CIRBP-201ENST00000320936 GATA5Q9BWX5 397 aaPredicted RBP17.54■□□□□ 0.4
CIRBP-201ENST00000320936 ZNF717Q9BY31 904 aaPredicted RBP17.54■□□□□ 0.4
CIRBP-201ENST00000320936 EPS8L2Q9H6S3 715 aa17.54■□□□□ 0.4
CIRBP-201ENST00000320936 DDX31Q9H8H2 851 aaKnown RBP17.54■□□□□ 0.4
CIRBP-201ENST00000320936 WDR41Q9HAD4 459 aa17.54■□□□□ 0.4
CIRBP-201ENST00000320936 KCNK9Q9NPC2 374 aa17.54■□□□□ 0.4
CIRBP-201ENST00000320936 C5AR2Q9P296 337 aa17.54■□□□□ 0.4
CIRBP-201ENST00000320936 ZNF462Q96JM2 2506 aa17.54■□□□□ 0.4
CIRBP-201ENST00000320936 A0A0A6YYD5 115 aa17.53■□□□□ 0.4
CIRBP-201ENST00000320936 MYOCOSA0A1B0GUC4 107 aa17.53■□□□□ 0.4
CIRBP-201ENST00000320936 BLACEA4D250 179 aa17.53■□□□□ 0.4
CIRBP-201ENST00000320936 A8MUI8 341 aa17.53■□□□□ 0.4
CIRBP-201ENST00000320936 H3BQF6 201 aa17.53■□□□□ 0.4
CIRBP-201ENST00000320936 SLC28A2O43868 658 aa17.53■□□□□ 0.4
CIRBP-201ENST00000320936 TYROBPO43914 113 aa17.53■□□□□ 0.4
CIRBP-201ENST00000320936 TMPRSS11DO60235 418 aa17.53■□□□□ 0.4
CIRBP-201ENST00000320936 LDB3O75112 727 aa17.53■□□□□ 0.4
CIRBP-201ENST00000320936 MYO1DO94832 1006 aa17.53■□□□□ 0.4
CIRBP-201ENST00000320936 NR2F6P10588 404 aa17.53■□□□□ 0.4
CIRBP-201ENST00000320936 HSD3B1P14060 373 aa17.53■□□□□ 0.4
CIRBP-201ENST00000320936 HSD3B2P26439 372 aa17.53■□□□□ 0.4
CIRBP-201ENST00000320936 IMPG1Q17R60 797 aa17.53■□□□□ 0.4
CIRBP-201ENST00000320936 CRB2Q5IJ48 1285 aa17.53■□□□□ 0.4
CIRBP-201ENST00000320936 CCNYL2Q5T2Q4 361 aa17.53■□□□□ 0.4
CIRBP-201ENST00000320936 JMJD6Q6NYC1 403 aaPredicted RBP17.53■□□□□ 0.4
CIRBP-201ENST00000320936 SCIMPQ6UWF3 145 aa17.53■□□□□ 0.4
CIRBP-201ENST00000320936 ISLR2Q6UXK2 745 aa17.53■□□□□ 0.4
CIRBP-201ENST00000320936 COMMD6Q7Z4G1 85 aa17.53■□□□□ 0.4
CIRBP-201ENST00000320936 EXOC3L1Q86VI1 746 aa17.53■□□□□ 0.4
CIRBP-201ENST00000320936 HPS6Q86YV9 775 aa17.53■□□□□ 0.4
CIRBP-201ENST00000320936 ZADH2Q8N4Q0 377 aa17.53■□□□□ 0.4
CIRBP-201ENST00000320936 AMER2Q8N7J2 671 aa17.53■□□□□ 0.4
CIRBP-201ENST00000320936 PPP1R14CQ8TAE6 165 aa17.53■□□□□ 0.4
CIRBP-201ENST00000320936 PGM2Q96G03 612 aa17.53■□□□□ 0.4
CIRBP-201ENST00000320936 RPF2Q9H7B2 306 aaKnown RBP17.53■□□□□ 0.4
CIRBP-201ENST00000320936 KCNK13Q9HB14 408 aa17.53■□□□□ 0.4
CIRBP-201ENST00000320936 VPS29Q9UBQ0 182 aa17.53■□□□□ 0.4
CIRBP-201ENST00000320936 FIS1Q9Y3D6 152 aa17.53■□□□□ 0.4
CIRBP-201ENST00000320936 ATG4BQ9Y4P1 393 aa17.53■□□□□ 0.4
CIRBP-201ENST00000320936 CPAMD8Q8IZJ3 1885 aa17.52■□□□□ 0.4
CIRBP-201ENST00000320936 SAGE2PA6NJ88 616 aa17.52■□□□□ 0.4
CIRBP-201ENST00000320936 TGFBR3LH3BV60 316 aa17.52■□□□□ 0.4
CIRBP-201ENST00000320936 CTNSO60931 367 aa17.52■□□□□ 0.4
CIRBP-201ENST00000320936 PRKRAO75569 313 aaKnown RBP17.52■□□□□ 0.4
CIRBP-201ENST00000320936 PPP2R1BP30154 601 aa17.52■□□□□ 0.4
CIRBP-201ENST00000320936 MAPK12P53778 367 aa17.52■□□□□ 0.4
CIRBP-201ENST00000320936 FOXA1P55317 472 aa17.52■□□□□ 0.4
CIRBP-201ENST00000320936 SLC26A5P58743 744 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms