RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 TAMM41Q96BW9 452 aa6.63□□□□□ -1.35
LYSMD3-201ENST00000315948 KLHDC7BQ96G42 594 aa6.63□□□□□ -1.35
LYSMD3-201ENST00000315948 CENPNQ96H22 339 aaPredicted RBP6.63□□□□□ -1.35
LYSMD3-201ENST00000315948 GLIPR2Q9H4G4 154 aa6.63□□□□□ -1.35
LYSMD3-201ENST00000315948 MVB12BQ9H7P6 319 aa6.63□□□□□ -1.35
LYSMD3-201ENST00000315948 ASCC3Q8N3C0 2202 aaKnown RBP6.63□□□□□ -1.35
LYSMD3-201ENST00000315948 DYTNA2CJ06 578 aa6.63□□□□□ -1.35
LYSMD3-201ENST00000315948 EVPLLA8MZ36 301 aa6.63□□□□□ -1.35
LYSMD3-201ENST00000315948 ZW10O43264 779 aa6.63□□□□□ -1.35
LYSMD3-201ENST00000315948 SEMA7AO75326 666 aa6.63□□□□□ -1.35
LYSMD3-201ENST00000315948 LDLRP01130 860 aa6.63□□□□□ -1.35
LYSMD3-201ENST00000315948 NPPAP01160 153 aa6.63□□□□□ -1.35
LYSMD3-201ENST00000315948 LINGO3P0C6S8 592 aa6.63□□□□□ -1.35
LYSMD3-201ENST00000315948 HIST1H1TP22492 207 aaPredicted RBP6.63□□□□□ -1.35
LYSMD3-201ENST00000315948 ATP5A1P25705 553 aaKnown RBP6.63□□□□□ -1.35
LYSMD3-201ENST00000315948 PIGFQ07326 219 aa6.63□□□□□ -1.35
LYSMD3-201ENST00000315948 MAPK11Q15759 364 aa6.63□□□□□ -1.35
LYSMD3-201ENST00000315948 PAQR7Q86WK9 346 aa6.63□□□□□ -1.35
LYSMD3-201ENST00000315948 OR9A2Q8NGT5 310 aa6.63□□□□□ -1.35
LYSMD3-201ENST00000315948 SUN3Q8TAQ9 357 aa6.63□□□□□ -1.35
LYSMD3-201ENST00000315948 GPBAR1Q8TDU6 330 aa6.63□□□□□ -1.35
LYSMD3-201ENST00000315948 KLHL6Q8WZ60 621 aa6.63□□□□□ -1.35
LYSMD3-201ENST00000315948 DUS3LQ96G46 650 aaKnown RBP6.63□□□□□ -1.35
LYSMD3-201ENST00000315948 ZNF597Q96LX8 424 aa6.63□□□□□ -1.35
LYSMD3-201ENST00000315948 OR2A5Q96R48 311 aa6.63□□□□□ -1.35
LYSMD3-201ENST00000315948 RMI1Q9H9A7 625 aa6.63□□□□□ -1.35
LYSMD3-201ENST00000315948 PELI2Q9HAT8 420 aa6.63□□□□□ -1.35
LYSMD3-201ENST00000315948 CAPN10Q9HC96 672 aa6.63□□□□□ -1.35
LYSMD3-201ENST00000315948 TAS2R9Q9NYW1 312 aa6.63□□□□□ -1.35
LYSMD3-201ENST00000315948 TMEM9Q9P0T7 183 aa6.63□□□□□ -1.35
LYSMD3-201ENST00000315948 SPATA7Q9P0W8 599 aa6.63□□□□□ -1.35
LYSMD3-201ENST00000315948 ATP6V1HQ9UI12 483 aa6.63□□□□□ -1.35
LYSMD3-201ENST00000315948 PADI4Q9UM07 663 aa6.63□□□□□ -1.35
LYSMD3-201ENST00000315948 SH3GLB1Q9Y371 365 aa6.63□□□□□ -1.35
LYSMD3-201ENST00000315948 COLEC10Q9Y6Z7 277 aa6.63□□□□□ -1.35
LYSMD3-201ENST00000315948 LRP4O75096 1905 aa6.63□□□□□ -1.35
LYSMD3-201ENST00000315948 CACNA1HO95180 2353 aa6.63□□□□□ -1.35
LYSMD3-201ENST00000315948 FAM220BPB1ANY3 271 aa6.63□□□□□ -1.35
LYSMD3-201ENST00000315948 M0QX08 132 aa6.63□□□□□ -1.35
LYSMD3-201ENST00000315948 M0R129 80 aa6.63□□□□□ -1.35
LYSMD3-201ENST00000315948 RNASET2O00584 256 aaKnown RBP6.63□□□□□ -1.35
LYSMD3-201ENST00000315948 GPR37L1O60883 481 aa6.63□□□□□ -1.35
LYSMD3-201ENST00000315948 ETS2P15036 469 aa6.63□□□□□ -1.35
LYSMD3-201ENST00000315948 ALDH4A1P30038 563 aa6.63□□□□□ -1.35
LYSMD3-201ENST00000315948 KDELR2P33947 212 aa6.63□□□□□ -1.35
LYSMD3-201ENST00000315948 CHRNB3Q05901 458 aa6.63□□□□□ -1.35
LYSMD3-201ENST00000315948 ABHD18Q0P651 414 aa6.63□□□□□ -1.35
LYSMD3-201ENST00000315948 GANABQ14697 944 aaKnown RBP6.63□□□□□ -1.35
LYSMD3-201ENST00000315948 ATP6AP1Q15904 470 aa6.63□□□□□ -1.35
LYSMD3-201ENST00000315948 SYPL1Q16563 259 aa6.63□□□□□ -1.35
LYSMD3-201ENST00000315948 SATL1Q86VE3 508 aa6.63□□□□□ -1.35
LYSMD3-201ENST00000315948 NUDT13Q86X67 352 aa6.63□□□□□ -1.35
LYSMD3-201ENST00000315948 NLGN4XQ8N0W4 816 aa6.63□□□□□ -1.35
LYSMD3-201ENST00000315948 SYNPOQ8N3V7 929 aa6.63□□□□□ -1.35
LYSMD3-201ENST00000315948 ANKFN1Q8N957 763 aa6.63□□□□□ -1.35
LYSMD3-201ENST00000315948 ZDHHC1Q8WTX9 485 aa6.63□□□□□ -1.35
LYSMD3-201ENST00000315948 RGMAQ96B86 450 aa6.63□□□□□ -1.35
LYSMD3-201ENST00000315948 RHNO1Q9BSD3 238 aa6.63□□□□□ -1.35
LYSMD3-201ENST00000315948 GORASP2Q9H8Y8 452 aa6.63□□□□□ -1.35
LYSMD3-201ENST00000315948 RAB23Q9ULC3 237 aa6.63□□□□□ -1.35
LYSMD3-201ENST00000315948 ASB4Q9Y574 426 aa6.63□□□□□ -1.35
LYSMD3-201ENST00000315948 HNRNPRO43390 633 aaKnown RBP6.62□□□□□ -1.35
LYSMD3-201ENST00000315948 TPST2O60704 377 aa6.62□□□□□ -1.35
LYSMD3-201ENST00000315948 TNFRSF21O75509 655 aa6.62□□□□□ -1.35
LYSMD3-201ENST00000315948 RECKO95980 971 aa6.62□□□□□ -1.35
LYSMD3-201ENST00000315948 TNFP01375 233 aa6.62□□□□□ -1.35
LYSMD3-201ENST00000315948 BCHEP06276 602 aa6.62□□□□□ -1.35
LYSMD3-201ENST00000315948 GPIP06744 558 aa6.62□□□□□ -1.35
LYSMD3-201ENST00000315948 SMIM18P0DKX4 95 aa6.62□□□□□ -1.35
LYSMD3-201ENST00000315948 RAP2AP10114 183 aa6.62□□□□□ -1.35
LYSMD3-201ENST00000315948 ELK4P28324 431 aa6.62□□□□□ -1.35
LYSMD3-201ENST00000315948 ASMTP46597 345 aa6.62□□□□□ -1.35
LYSMD3-201ENST00000315948 RABIFP47224 123 aa6.62□□□□□ -1.35
LYSMD3-201ENST00000315948 VSX2P58304 361 aaPredicted RBP6.62□□□□□ -1.35
LYSMD3-201ENST00000315948 MAT1AQ00266 395 aaKnown RBP6.62□□□□□ -1.35
LYSMD3-201ENST00000315948 RUNX2Q13950 521 aa6.62□□□□□ -1.35
LYSMD3-201ENST00000315948 LEXMQ3ZCV2 418 aa6.62□□□□□ -1.35
LYSMD3-201ENST00000315948 CYBRD1Q53TN4 286 aa6.62□□□□□ -1.35
LYSMD3-201ENST00000315948 SNAP47Q5SQN1 464 aa6.62□□□□□ -1.35
LYSMD3-201ENST00000315948 CEACAM20Q6UY09 585 aa6.62□□□□□ -1.35
LYSMD3-201ENST00000315948 TSPYL5Q86VY4 417 aaPredicted RBP6.62□□□□□ -1.35
LYSMD3-201ENST00000315948 GATAD2AQ86YP4 633 aa6.62□□□□□ -1.35
LYSMD3-201ENST00000315948 CHERPQ8IWX8 916 aaKnown RBP6.62□□□□□ -1.35
LYSMD3-201ENST00000315948 METTL25Q8N6Q8 603 aa6.62□□□□□ -1.35
LYSMD3-201ENST00000315948 TM9SF3Q9HD45 589 aa6.62□□□□□ -1.35
LYSMD3-201ENST00000315948 C1GALT1Q9NS00 363 aa6.62□□□□□ -1.35
LYSMD3-201ENST00000315948 RLIMQ9NVW2 624 aa6.62□□□□□ -1.35
LYSMD3-201ENST00000315948 TRBC2A0A5B9 178 aa6.62□□□□□ -1.35
LYSMD3-201ENST00000315948 H0YGG7 62 aa6.62□□□□□ -1.35
LYSMD3-201ENST00000315948 SGK494L7N484 410 aa6.62□□□□□ -1.35
LYSMD3-201ENST00000315948 FRS3O43559 492 aa6.62□□□□□ -1.35
LYSMD3-201ENST00000315948 NDUFS2O75306 463 aa6.62□□□□□ -1.35
LYSMD3-201ENST00000315948 POU2F1P14859 743 aa6.62□□□□□ -1.35
LYSMD3-201ENST00000315948 SHMT2P34897 504 aa6.62□□□□□ -1.35
LYSMD3-201ENST00000315948 NCBP2P52298 156 aaKnown RBP eCLIP6.62□□□□□ -1.35
LYSMD3-201ENST00000315948 ARF3P61204 181 aaPredicted RBP6.62□□□□□ -1.35
LYSMD3-201ENST00000315948 UBE2IP63279 158 aaKnown RBP6.62□□□□□ -1.35
LYSMD3-201ENST00000315948 LPAL2Q16609 132 aa6.62□□□□□ -1.35
LYSMD3-201ENST00000315948 FAM98BQ52LJ0 330 aaKnown RBP6.62□□□□□ -1.35
LYSMD3-201ENST00000315948 PPP4R4Q6NUP7 873 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms