RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.43□□□□□ -1.22
CNOT4-201ENST00000315544 CXorf36Q9H7Y0 433 aa7.43□□□□□ -1.22
CNOT4-201ENST00000315544 CCDC163A0A0D9SF12 145 aa7.43□□□□□ -1.22
CNOT4-201ENST00000315544 C17orf113A0A1B0GUU1 675 aa7.43□□□□□ -1.22
CNOT4-201ENST00000315544 CCDC182A6NF36 153 aa7.43□□□□□ -1.22
CNOT4-201ENST00000315544 PLPP1O14494 284 aa7.43□□□□□ -1.22
CNOT4-201ENST00000315544 PCDH17O14917 1159 aa7.43□□□□□ -1.22
CNOT4-201ENST00000315544 PTTG1O95997 202 aa7.43□□□□□ -1.22
CNOT4-201ENST00000315544 GADD45AP24522 165 aa7.43□□□□□ -1.22
CNOT4-201ENST00000315544 ELAVL4P26378 380 aaKnown RBP7.43□□□□□ -1.22
CNOT4-201ENST00000315544 NEK2P51955 445 aa7.43□□□□□ -1.22
CNOT4-201ENST00000315544 RPS11P62280 158 aaKnown RBP eCLIP7.43□□□□□ -1.22
CNOT4-201ENST00000315544 C19orf57Q0VDD7 668 aa7.43□□□□□ -1.22
CNOT4-201ENST00000315544 DUSP8Q13202 625 aa7.43□□□□□ -1.22
CNOT4-201ENST00000315544 ZRSR2Q15696 482 aaKnown RBP7.43□□□□□ -1.22
CNOT4-201ENST00000315544 FRG2Q64ET8 278 aa7.43□□□□□ -1.22
CNOT4-201ENST00000315544 PGBD2Q6P3X8 592 aa7.43□□□□□ -1.22
CNOT4-201ENST00000315544 ZNF793Q6ZN11 406 aa7.43□□□□□ -1.22
CNOT4-201ENST00000315544 ZDHHC21Q8IVQ6 265 aa7.43□□□□□ -1.22
CNOT4-201ENST00000315544 CMIPQ8IY22 773 aa7.43□□□□□ -1.22
CNOT4-201ENST00000315544 C8orf59Q8N0T1 100 aaPredicted RBP7.43□□□□□ -1.22
CNOT4-201ENST00000315544 TRAM1L1Q8N609 369 aa7.43□□□□□ -1.22
CNOT4-201ENST00000315544 ATL1Q8WXF7 558 aa7.43□□□□□ -1.22
CNOT4-201ENST00000315544 ULK4Q96C45 1275 aa7.43□□□□□ -1.22
CNOT4-201ENST00000315544 FRG2BQ96QU4 278 aa7.43□□□□□ -1.22
CNOT4-201ENST00000315544 UTP23Q9BRU9 249 aaKnown RBP7.43□□□□□ -1.22
CNOT4-201ENST00000315544 SLC6A5Q9Y345 797 aa7.43□□□□□ -1.22
CNOT4-201ENST00000315544 IFT52Q9Y366 437 aa7.43□□□□□ -1.22
CNOT4-201ENST00000315544 TRIOBPQ9H2D6 2365 aa7.43□□□□□ -1.22
CNOT4-201ENST00000315544 TECTAO75443 2155 aa7.42□□□□□ -1.22
CNOT4-201ENST00000315544 MYO1GB0I1T2 1018 aa7.42□□□□□ -1.22
CNOT4-201ENST00000315544 CLDN25C9JDP6 229 aa7.42□□□□□ -1.22
CNOT4-201ENST00000315544 RHOBTB1O94844 696 aa7.42□□□□□ -1.22
CNOT4-201ENST00000315544 C9P02748 559 aa7.42□□□□□ -1.22
CNOT4-201ENST00000315544 SRFP11831 508 aa7.42□□□□□ -1.22
CNOT4-201ENST00000315544 ATP1B2P14415 290 aaPredicted RBP7.42□□□□□ -1.22
CNOT4-201ENST00000315544 RPS19P39019 145 aaKnown RBP7.42□□□□□ -1.22
CNOT4-201ENST00000315544 STK19P49842 368 aaPredicted RBP7.42□□□□□ -1.22
CNOT4-201ENST00000315544 AP1S2P56377 157 aa7.42□□□□□ -1.22
CNOT4-201ENST00000315544 KCNK10P57789 538 aa7.42□□□□□ -1.22
CNOT4-201ENST00000315544 TAP2Q03519 686 aa7.42□□□□□ -1.22
CNOT4-201ENST00000315544 AASDHQ4L235 1098 aaPredicted RBP7.42□□□□□ -1.22
CNOT4-201ENST00000315544 CTXN3Q4LDR2 81 aa7.42□□□□□ -1.22
CNOT4-201ENST00000315544 C9orf64Q5T6V5 341 aa7.42□□□□□ -1.22
CNOT4-201ENST00000315544 VITQ6UXI7 678 aa7.42□□□□□ -1.22
CNOT4-201ENST00000315544 ERN2Q76MJ5 926 aaKnown RBP7.42□□□□□ -1.22
CNOT4-201ENST00000315544 LSRQ86X29 649 aaPredicted RBP7.42□□□□□ -1.22
CNOT4-201ENST00000315544 TCAIMQ8N3R3 496 aa7.42□□□□□ -1.22
CNOT4-201ENST00000315544 SLC5A8Q8N695 610 aa7.42□□□□□ -1.22
CNOT4-201ENST00000315544 MAL2Q969L2 176 aa7.42□□□□□ -1.22
CNOT4-201ENST00000315544 MTERF3Q96E29 417 aa7.42□□□□□ -1.22
CNOT4-201ENST00000315544 ZFYVE1Q9HBF4 777 aa7.42□□□□□ -1.22
CNOT4-201ENST00000315544 CHCHD3Q9NX63 227 aaKnown RBP7.42□□□□□ -1.22
CNOT4-201ENST00000315544 TAS2R16Q9NYV7 291 aa7.42□□□□□ -1.22
CNOT4-201ENST00000315544 POU2F3Q9UKI9 436 aa7.42□□□□□ -1.22
CNOT4-201ENST00000315544 ZNF232Q9UNY5 417 aa7.42□□□□□ -1.22
CNOT4-201ENST00000315544 A0A1W2PRQ8 180 aa7.42□□□□□ -1.22
CNOT4-201ENST00000315544 HYKKA2RU49 373 aa7.42□□□□□ -1.22
CNOT4-201ENST00000315544 MAGEB17A8MXT2 336 aa7.42□□□□□ -1.22
CNOT4-201ENST00000315544 SUPT3HB4E1H0 165 aa7.42□□□□□ -1.22
CNOT4-201ENST00000315544 F5H5T6 163 aa7.42□□□□□ -1.22
CNOT4-201ENST00000315544 K7ESF4 209 aa7.42□□□□□ -1.22
CNOT4-201ENST00000315544 PSMD11O00231 422 aa7.42□□□□□ -1.22
CNOT4-201ENST00000315544 RNGTTO60942 597 aaKnown RBP7.42□□□□□ -1.22
CNOT4-201ENST00000315544 ADH1AP07327 375 aa7.42□□□□□ -1.22
CNOT4-201ENST00000315544 ENGP17813 658 aa7.42□□□□□ -1.22
CNOT4-201ENST00000315544 PDHA2P29803 388 aa7.42□□□□□ -1.22
CNOT4-201ENST00000315544 SPAM1P38567 509 aa7.42□□□□□ -1.22
CNOT4-201ENST00000315544 TUBA1BP68363 451 aa7.42□□□□□ -1.22
CNOT4-201ENST00000315544 DGCR6Q14129 220 aa7.42□□□□□ -1.22
CNOT4-201ENST00000315544 FGL2Q14314 439 aa7.42□□□□□ -1.22
CNOT4-201ENST00000315544 SLC5A12Q1EHB4 618 aa7.42□□□□□ -1.22
CNOT4-201ENST00000315544 HECTD3Q5T447 861 aa7.42□□□□□ -1.22
CNOT4-201ENST00000315544 C22orf39Q6P5X5 142 aa7.42□□□□□ -1.22
CNOT4-201ENST00000315544 CRTC3Q6UUV7 619 aa7.42□□□□□ -1.22
CNOT4-201ENST00000315544 TUBA1AQ71U36 451 aa7.42□□□□□ -1.22
CNOT4-201ENST00000315544 ZBTB44Q8NCP5 570 aa7.42□□□□□ -1.22
CNOT4-201ENST00000315544 OR10Q1Q8NGQ4 319 aa7.42□□□□□ -1.22
CNOT4-201ENST00000315544 TTC9Q92623 222 aa7.42□□□□□ -1.22
CNOT4-201ENST00000315544 DIO2Q92813 273 aa7.42□□□□□ -1.22
CNOT4-201ENST00000315544 SLC25A46Q96AG3 418 aa7.42□□□□□ -1.22
CNOT4-201ENST00000315544 TM4SF18Q96CE8 201 aa7.42□□□□□ -1.22
CNOT4-201ENST00000315544 ZSWIM3Q96MP5 696 aa7.42□□□□□ -1.22
CNOT4-201ENST00000315544 RNF145Q96MT1 663 aa7.42□□□□□ -1.22
CNOT4-201ENST00000315544 MMP27Q9H306 513 aa7.42□□□□□ -1.22
CNOT4-201ENST00000315544 MVB12BQ9H7P6 319 aa7.42□□□□□ -1.22
CNOT4-201ENST00000315544 DDX31Q9H8H2 851 aaKnown RBP7.42□□□□□ -1.22
CNOT4-201ENST00000315544 IL1RL2Q9HB29 575 aa7.42□□□□□ -1.22
CNOT4-201ENST00000315544 MRPL17Q9NRX2 175 aaKnown RBP7.42□□□□□ -1.22
CNOT4-201ENST00000315544 THUMPD1Q9NXG2 353 aaKnown RBP7.42□□□□□ -1.22
CNOT4-201ENST00000315544 DPP7Q9UHL4 492 aa7.42□□□□□ -1.22
CNOT4-201ENST00000315544 ASB4Q9Y574 426 aa7.42□□□□□ -1.22
CNOT4-201ENST00000315544 GLYATL1P3A0A0U1RQE8 302 aa7.42□□□□□ -1.22
CNOT4-201ENST00000315544 SH3D21A4FU49 640 aa7.42□□□□□ -1.22
CNOT4-201ENST00000315544 UPK3BL1B0FP48 263 aa7.42□□□□□ -1.22
CNOT4-201ENST00000315544 UPK3BL2E5RIL1 263 aa7.42□□□□□ -1.22
CNOT4-201ENST00000315544 ERVH48-1M5A8F1 160 aa7.42□□□□□ -1.22
CNOT4-201ENST00000315544 BCKDKO14874 412 aa7.42□□□□□ -1.22
CNOT4-201ENST00000315544 ANGPT2O15123 496 aa7.42□□□□□ -1.22
CNOT4-201ENST00000315544 DEAF1O75398 565 aaPredicted RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms