RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 OLIG3Q7RTU3 272 aa11.83□□□□□ -0.52
RNF4-201ENST00000314289 SFTPA2Q8IWL1 248 aa11.83□□□□□ -0.52
RNF4-201ENST00000314289 OR2T29Q8NH02 315 aa11.83□□□□□ -0.52
RNF4-201ENST00000314289 STARD8Q92502 1023 aa11.83□□□□□ -0.52
RNF4-201ENST00000314289 RAB8BQ92930 207 aa11.83□□□□□ -0.52
RNF4-201ENST00000314289 RIPOR3Q96MK2 946 aa11.83□□□□□ -0.52
RNF4-201ENST00000314289 MS4A8Q9BY19 250 aa11.83□□□□□ -0.52
RNF4-201ENST00000314289 BHLHE41Q9C0J9 482 aaPredicted RBP11.83□□□□□ -0.52
RNF4-201ENST00000314289 CHST8Q9H2A9 424 aa11.83□□□□□ -0.52
RNF4-201ENST00000314289 RUBCNLQ9H714 662 aa11.83□□□□□ -0.52
RNF4-201ENST00000314289 CXorf36Q9H7Y0 433 aa11.83□□□□□ -0.52
RNF4-201ENST00000314289 SACM1LQ9NTJ5 587 aa11.83□□□□□ -0.52
RNF4-201ENST00000314289 ATAD3AQ9NVI7 634 aa11.83□□□□□ -0.52
RNF4-201ENST00000314289 PDP1Q9P0J1 537 aaPredicted RBP11.83□□□□□ -0.52
RNF4-201ENST00000314289 TMEFF2Q9UIK5 374 aaPredicted RBP11.83□□□□□ -0.52
RNF4-201ENST00000314289 TESMINQ9Y4I5 508 aa11.83□□□□□ -0.52
RNF4-201ENST00000314289 KDM1AO60341 852 aa11.83□□□□□ -0.52
RNF4-201ENST00000314289 GPR37L1O60883 481 aa11.83□□□□□ -0.52
RNF4-201ENST00000314289 NME6O75414 186 aaPredicted RBP11.83□□□□□ -0.52
RNF4-201ENST00000314289 CPNE6O95741 557 aa11.83□□□□□ -0.52
RNF4-201ENST00000314289 BSGP35613 385 aa11.83□□□□□ -0.52
RNF4-201ENST00000314289 TNFRSF4P43489 277 aa11.83□□□□□ -0.52
RNF4-201ENST00000314289 HTR4Q13639 388 aa11.83□□□□□ -0.52
RNF4-201ENST00000314289 CTU2Q2VPK5 515 aaKnown RBP11.83□□□□□ -0.52
RNF4-201ENST00000314289 CCDC92Q53HC0 331 aaPredicted RBP11.83□□□□□ -0.52
RNF4-201ENST00000314289 ZNF542PQ5EBM4 170 aa11.83□□□□□ -0.52
RNF4-201ENST00000314289 RPS26P11Q5JNZ5 115 aaPredicted RBP11.83□□□□□ -0.52
RNF4-201ENST00000314289 R3HCC1LQ7Z5L2 792 aaKnown RBP11.83□□□□□ -0.52
RNF4-201ENST00000314289 DCP2Q8IU60 420 aaKnown RBP11.83□□□□□ -0.52
RNF4-201ENST00000314289 OR5K1Q8NHB7 308 aa11.83□□□□□ -0.52
RNF4-201ENST00000314289 UBE2E3Q969T4 207 aa11.83□□□□□ -0.52
RNF4-201ENST00000314289 TM4SF18Q96CE8 201 aa11.83□□□□□ -0.52
RNF4-201ENST00000314289 MRGPRX1Q96LB2 322 aa11.83□□□□□ -0.52
RNF4-201ENST00000314289 AICDAQ9GZX7 198 aa11.83□□□□□ -0.52
RNF4-201ENST00000314289 MYNNQ9NPC7 610 aa11.83□□□□□ -0.52
RNF4-201ENST00000314289 TAS2R9Q9NYW1 312 aa11.83□□□□□ -0.52
RNF4-201ENST00000314289 ZNF282Q9UDV7 671 aaPredicted RBP11.83□□□□□ -0.52
RNF4-201ENST00000314289 ACSL5Q9ULC5 683 aa11.83□□□□□ -0.52
RNF4-201ENST00000314289 ICKQ9UPZ9 632 aa11.83□□□□□ -0.52
RNF4-201ENST00000314289 C4orf51C9J302 202 aa11.83□□□□□ -0.52
RNF4-201ENST00000314289 PTGES3LE9PB15 166 aa11.83□□□□□ -0.52
RNF4-201ENST00000314289 M0QX08 132 aa11.83□□□□□ -0.52
RNF4-201ENST00000314289 CACNB4O00305 520 aaPredicted RBP11.83□□□□□ -0.52
RNF4-201ENST00000314289 SUV39H1O43463 412 aa11.83□□□□□ -0.52
RNF4-201ENST00000314289 ERGP11308 486 aa11.83□□□□□ -0.52
RNF4-201ENST00000314289 ACADMP11310 421 aa11.83□□□□□ -0.52
RNF4-201ENST00000314289 IGFBP4P22692 258 aa11.83□□□□□ -0.52
RNF4-201ENST00000314289 RAB28P51157 221 aa11.83□□□□□ -0.52
RNF4-201ENST00000314289 C21orf58P58505 322 aa11.83□□□□□ -0.52
RNF4-201ENST00000314289 ZNF750Q32MQ0 723 aa11.83□□□□□ -0.52
RNF4-201ENST00000314289 XAF1Q6GPH4 301 aa11.83□□□□□ -0.52
RNF4-201ENST00000314289 CBLL1Q75N03 491 aa11.83□□□□□ -0.52
RNF4-201ENST00000314289 CAMKMTQ7Z624 323 aa11.83□□□□□ -0.52
RNF4-201ENST00000314289 UBE3DQ7Z6J8 389 aa11.83□□□□□ -0.52
RNF4-201ENST00000314289 PARP8Q8N3A8 854 aa11.83□□□□□ -0.52
RNF4-201ENST00000314289 C11orf65Q8NCR3 313 aa11.83□□□□□ -0.52
RNF4-201ENST00000314289 ABHD11Q8NFV4 315 aa11.83□□□□□ -0.52
RNF4-201ENST00000314289 CNIH3Q8TBE1 160 aa11.83□□□□□ -0.52
RNF4-201ENST00000314289 RAB2BQ8WUD1 216 aa11.83□□□□□ -0.52
RNF4-201ENST00000314289 OR1E3Q8WZA6 343 aa11.83□□□□□ -0.52
RNF4-201ENST00000314289 TEFMQ96QE5 360 aaKnown RBP11.83□□□□□ -0.52
RNF4-201ENST00000314289 RBM4BQ9BQ04 359 aaKnown RBP11.83□□□□□ -0.52
RNF4-201ENST00000314289 RBM4Q9BWF3 364 aaKnown RBP11.83□□□□□ -0.52
RNF4-201ENST00000314289 CCDC90BQ9GZT6 254 aa11.83□□□□□ -0.52
RNF4-201ENST00000314289 MAGIXQ9H6Y5 334 aa11.83□□□□□ -0.52
RNF4-201ENST00000314289 TMEM184CQ9NVA4 438 aa11.83□□□□□ -0.52
RNF4-201ENST00000314289 SIRT5Q9NXA8 310 aa11.83□□□□□ -0.52
RNF4-201ENST00000314289 SLC17A4Q9Y2C5 497 aa11.83□□□□□ -0.52
RNF4-201ENST00000314289 A0A1W2PS29 197 aa11.82□□□□□ -0.52
RNF4-201ENST00000314289 TMEM229AB2RXF0 380 aa11.82□□□□□ -0.52
RNF4-201ENST00000314289 J3KTA2 159 aa11.82□□□□□ -0.52
RNF4-201ENST00000314289 SH3BP5O60239 455 aa11.82□□□□□ -0.52
RNF4-201ENST00000314289 SEC14L2O76054 403 aa11.82□□□□□ -0.52
RNF4-201ENST00000314289 DAPP51397 102 aa11.82□□□□□ -0.52
RNF4-201ENST00000314289 MANFP55145 182 aaKnown RBP11.82□□□□□ -0.52
RNF4-201ENST00000314289 SNRPNP63162 240 aaKnown RBP11.82□□□□□ -0.52
RNF4-201ENST00000314289 GRSF1Q12849 480 aaKnown RBP eCLIP11.82□□□□□ -0.52
RNF4-201ENST00000314289 PDE7AQ13946 482 aa11.82□□□□□ -0.52
RNF4-201ENST00000314289 SCARB2Q14108 478 aa11.82□□□□□ -0.52
RNF4-201ENST00000314289 EIF3MQ7L2H7 374 aaKnown RBP11.82□□□□□ -0.52
RNF4-201ENST00000314289 ZNF555Q8NEP9 628 aa11.82□□□□□ -0.52
RNF4-201ENST00000314289 OR52E4Q8NGH9 312 aa11.82□□□□□ -0.52
RNF4-201ENST00000314289 HMGB4Q8WW32 186 aa11.82□□□□□ -0.52
RNF4-201ENST00000314289 UBE2FQ969M7 185 aa11.82□□□□□ -0.52
RNF4-201ENST00000314289 METTL2AQ96IZ6 378 aaKnown RBP11.82□□□□□ -0.52
RNF4-201ENST00000314289 TUBA1CQ9BQE3 449 aa11.82□□□□□ -0.52
RNF4-201ENST00000314289 DPH7Q9BTV6 452 aa11.82□□□□□ -0.52
RNF4-201ENST00000314289 TMEM168Q9H0V1 697 aa11.82□□□□□ -0.52
RNF4-201ENST00000314289 RPS6KA6Q9UK32 745 aa11.82□□□□□ -0.52
RNF4-201ENST00000314289 PRSS38A1L453 326 aa11.82□□□□□ -0.52
RNF4-201ENST00000314289 ISM1B1AKI9 464 aa11.82□□□□□ -0.52
RNF4-201ENST00000314289 KPNA4O00629 521 aaPredicted RBP11.82□□□□□ -0.52
RNF4-201ENST00000314289 HAT1O14929 419 aa11.82□□□□□ -0.52
RNF4-201ENST00000314289 NDUFS4O43181 175 aa11.82□□□□□ -0.52
RNF4-201ENST00000314289 GSTT2P0CG29 244 aa11.82□□□□□ -0.52
RNF4-201ENST00000314289 GSTT2BP0CG30 244 aa11.82□□□□□ -0.52
RNF4-201ENST00000314289 C7P10643 843 aa11.82□□□□□ -0.52
RNF4-201ENST00000314289 NDUFV2P19404 249 aa11.82□□□□□ -0.52
RNF4-201ENST00000314289 IGFBP5P24593 272 aa11.82□□□□□ -0.52
RNF4-201ENST00000314289 BCL6P41182 706 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms