RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 TM9SF3Q9HD45 589 aa13.06□□□□□ -0.32
DDX54-202ENST00000314045 MBNL1Q9NR56 388 aaKnown RBP13.06□□□□□ -0.32
DDX54-202ENST00000314045 HCN3Q9P1Z3 774 aa13.06□□□□□ -0.32
DDX54-202ENST00000314045 FAM25AB3EWG3 89 aa13.06□□□□□ -0.32
DDX54-202ENST00000314045 FAM25CB3EWG5 89 aa13.06□□□□□ -0.32
DDX54-202ENST00000314045 FAM25GB3EWG6 89 aa13.06□□□□□ -0.32
DDX54-202ENST00000314045 MPZL2O60487 215 aa13.06□□□□□ -0.32
DDX54-202ENST00000314045 GRK6P43250 576 aa13.06□□□□□ -0.32
DDX54-202ENST00000314045 MC1RQ01726 317 aa13.06□□□□□ -0.32
DDX54-202ENST00000314045 GRM7Q14831 915 aa13.06□□□□□ -0.32
DDX54-202ENST00000314045 CCSMST1Q4G0I0 132 aa13.06□□□□□ -0.32
DDX54-202ENST00000314045 LIN52Q52LA3 116 aa13.06□□□□□ -0.32
DDX54-202ENST00000314045 SMARCD3Q6STE5 483 aa13.06□□□□□ -0.32
DDX54-202ENST00000314045 TMEM107Q6UX40 140 aa13.06□□□□□ -0.32
DDX54-202ENST00000314045 EHD1Q9H4M9 534 aa13.06□□□□□ -0.32
DDX54-202ENST00000314045 TM7SF3Q9NS93 570 aa13.06□□□□□ -0.32
DDX54-202ENST00000314045 PARP14Q460N5 1801 aa13.06□□□□□ -0.32
DDX54-202ENST00000314045 TMEM202A6NGA9 273 aa13.06□□□□□ -0.32
DDX54-202ENST00000314045 SHC2P98077 582 aa13.06□□□□□ -0.32
DDX54-202ENST00000314045 C16orf72Q14CZ0 275 aa13.06□□□□□ -0.32
DDX54-202ENST00000314045 Q6ZSR9 355 aa13.06□□□□□ -0.32
DDX54-202ENST00000314045 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.06□□□□□ -0.32
DDX54-202ENST00000314045 DENND6BQ8NEG7 585 aa13.06□□□□□ -0.32
DDX54-202ENST00000314045 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.06□□□□□ -0.32
DDX54-202ENST00000314045 ALG14Q96F25 216 aa13.06□□□□□ -0.32
DDX54-202ENST00000314045 ALPK1Q96QP1 1244 aa13.06□□□□□ -0.32
DDX54-202ENST00000314045 SMURF2Q9HAU4 748 aa13.06□□□□□ -0.32
DDX54-202ENST00000314045 TRNAU1APQ9NX07 287 aaKnown RBP13.06□□□□□ -0.32
DDX54-202ENST00000314045 TAAR2Q9P1P5 351 aa13.06□□□□□ -0.32
DDX54-202ENST00000314045 GPR37L1O60883 481 aa13.06□□□□□ -0.32
DDX54-202ENST00000314045 PVRP15151 417 aa13.06□□□□□ -0.32
DDX54-202ENST00000314045 PORP16435 677 aaPredicted RBP13.06□□□□□ -0.32
DDX54-202ENST00000314045 TAF13Q15543 124 aa13.06□□□□□ -0.32
DDX54-202ENST00000314045 BCL7AQ4VC05 210 aa13.06□□□□□ -0.32
DDX54-202ENST00000314045 ZBTB46Q86UZ6 589 aa13.06□□□□□ -0.32
DDX54-202ENST00000314045 OR8H2Q8N162 312 aa13.06□□□□□ -0.32
DDX54-202ENST00000314045 ZNF527Q8NB42 609 aa13.06□□□□□ -0.32
DDX54-202ENST00000314045 MKRN2Q9H000 416 aaKnown RBP13.06□□□□□ -0.32
DDX54-202ENST00000314045 RHCGQ9UBD6 479 aa13.06□□□□□ -0.32
DDX54-202ENST00000314045 MMP17Q9ULZ9 603 aa13.06□□□□□ -0.32
DDX54-202ENST00000314045 TET1Q8NFU7 2136 aa13.05□□□□□ -0.32
DDX54-202ENST00000314045 ATG2BQ96BY7 2078 aa13.05□□□□□ -0.32
DDX54-202ENST00000314045 STX11O75558 287 aa13.05□□□□□ -0.32
DDX54-202ENST00000314045 ETS2P15036 469 aa13.05□□□□□ -0.32
DDX54-202ENST00000314045 PSMA3P25788 255 aa13.05□□□□□ -0.32
DDX54-202ENST00000314045 OPRD1P41143 372 aa13.05□□□□□ -0.32
DDX54-202ENST00000314045 ALDH3A2P51648 485 aa13.05□□□□□ -0.32
DDX54-202ENST00000314045 ADPRHP54922 357 aa13.05□□□□□ -0.32
DDX54-202ENST00000314045 ST3GAL3Q11203 375 aa13.05□□□□□ -0.32
DDX54-202ENST00000314045 SPANXN2Q5MJ10 180 aa13.05□□□□□ -0.32
DDX54-202ENST00000314045 GALNT10Q86SR1 603 aa13.05□□□□□ -0.32
DDX54-202ENST00000314045 ZNF740Q8NDX6 193 aa13.05□□□□□ -0.32
DDX54-202ENST00000314045 OR4C6Q8NH72 309 aa13.05□□□□□ -0.32
DDX54-202ENST00000314045 GORASP1Q9BQQ3 440 aa13.05□□□□□ -0.32
DDX54-202ENST00000314045 LIPT1Q9Y234 373 aa13.05□□□□□ -0.32
DDX54-202ENST00000314045 SIT1Q9Y3P8 196 aa13.05□□□□□ -0.32
DDX54-202ENST00000314045 PNMA8CA0A1B0GUJ8 204 aa13.05□□□□□ -0.32
DDX54-202ENST00000314045 XKRYO14609 159 aa13.05□□□□□ -0.32
DDX54-202ENST00000314045 PSIP1O75475 530 aaKnown RBP13.05□□□□□ -0.32
DDX54-202ENST00000314045 SEMA3DO95025 777 aa13.05□□□□□ -0.32
DDX54-202ENST00000314045 ARSFP54793 590 aa13.05□□□□□ -0.32
DDX54-202ENST00000314045 ZXDBP98169 803 aa13.05□□□□□ -0.32
DDX54-202ENST00000314045 RNF220Q5VTB9 566 aa13.05□□□□□ -0.32
DDX54-202ENST00000314045 SH2D5Q6ZV89 423 aa13.05□□□□□ -0.32
DDX54-202ENST00000314045 FAM220AQ7Z4H9 259 aa13.05□□□□□ -0.32
DDX54-202ENST00000314045 ZSWIM9Q86XI8 627 aa13.05□□□□□ -0.32
DDX54-202ENST00000314045 OR2L5Q8NG80 312 aa13.05□□□□□ -0.32
DDX54-202ENST00000314045 ADAMTS19Q8TE59 1207 aa13.05□□□□□ -0.32
DDX54-202ENST00000314045 GRHL3Q8TE85 626 aa13.05□□□□□ -0.32
DDX54-202ENST00000314045 RPP25Q9BUL9 199 aaKnown RBP13.05□□□□□ -0.32
DDX54-202ENST00000314045 OR51I1Q9H343 314 aa13.05□□□□□ -0.32
DDX54-202ENST00000314045 FGF22Q9HCT0 170 aa13.05□□□□□ -0.32
DDX54-202ENST00000314045 MKKSQ9NPJ1 570 aaPredicted RBP13.05□□□□□ -0.32
DDX54-202ENST00000314045 ELOA3DA6NLF2 546 aaPredicted RBP13.05□□□□□ -0.32
DDX54-202ENST00000314045 SORBS2O94875 1100 aaKnown RBP13.05□□□□□ -0.32
DDX54-202ENST00000314045 CTSLP07711 333 aa13.05□□□□□ -0.32
DDX54-202ENST00000314045 GABRA3P34903 492 aa13.05□□□□□ -0.32
DDX54-202ENST00000314045 CSNK1EP49674 416 aaKnown RBP13.05□□□□□ -0.32
DDX54-202ENST00000314045 TAS2R38P59533 333 aa13.05□□□□□ -0.32
DDX54-202ENST00000314045 SMAD4Q13485 552 aaKnown RBP13.05□□□□□ -0.32
DDX54-202ENST00000314045 ELOA3BQ3SY89 546 aa13.05□□□□□ -0.32
DDX54-202ENST00000314045 LYSMD4Q5XG99 296 aa13.05□□□□□ -0.32
DDX54-202ENST00000314045 LCN8Q6JVE9 175 aa13.05□□□□□ -0.32
DDX54-202ENST00000314045 SLCO4C1Q6ZQN7 724 aa13.05□□□□□ -0.32
DDX54-202ENST00000314045 MAVSQ7Z434 540 aa13.05□□□□□ -0.32
DDX54-202ENST00000314045 SPRED2Q7Z698 418 aa13.05□□□□□ -0.32
DDX54-202ENST00000314045 GALNT12Q8IXK2 581 aa13.05□□□□□ -0.32
DDX54-202ENST00000314045 ACOT4Q8N9L9 421 aa13.05□□□□□ -0.32
DDX54-202ENST00000314045 ELOA3Q8NG57 546 aa13.05□□□□□ -0.32
DDX54-202ENST00000314045 OR52N2Q8NGI0 321 aa13.05□□□□□ -0.32
DDX54-202ENST00000314045 TMEM125Q96AQ2 219 aa13.05□□□□□ -0.32
DDX54-202ENST00000314045 ECHDC3Q96DC8 303 aa13.05□□□□□ -0.32
DDX54-202ENST00000314045 PEX11GQ96HA9 241 aa13.05□□□□□ -0.32
DDX54-202ENST00000314045 IL4I1Q96RQ9 567 aa13.05□□□□□ -0.32
DDX54-202ENST00000314045 DOHHQ9BU89 302 aa13.05□□□□□ -0.32
DDX54-202ENST00000314045 ADAM30Q9UKF2 790 aa13.05□□□□□ -0.32
DDX54-202ENST00000314045 PSME4Q14997 1843 aa13.04□□□□□ -0.32
DDX54-202ENST00000314045 IRGMA1A4Y4 181 aa13.04□□□□□ -0.32
DDX54-202ENST00000314045 DPPA5A6NC42 116 aa13.04□□□□□ -0.32
DDX54-202ENST00000314045 TACR1P25103 407 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms