RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 WDR26Q9H7D7 661 aa11.01□□□□□ -0.65
PTPN2-201ENST00000309660 GPSM3Q9Y4H4 160 aa11.01□□□□□ -0.65
PTPN2-201ENST00000309660 PLXNA2O75051 1894 aa11.01□□□□□ -0.65
PTPN2-201ENST00000309660 KLHL18O94889 574 aa11□□□□□ -0.65
PTPN2-201ENST00000309660 IFNA14P01570 189 aa11□□□□□ -0.65
PTPN2-201ENST00000309660 IFNW1P05000 195 aa11□□□□□ -0.65
PTPN2-201ENST00000309660 FEN1P39748 380 aaKnown RBP11□□□□□ -0.65
PTPN2-201ENST00000309660 PIK3CBP42338 1070 aa11□□□□□ -0.65
PTPN2-201ENST00000309660 CCR8P51685 355 aa11□□□□□ -0.65
PTPN2-201ENST00000309660 C21orf58P58505 322 aa11□□□□□ -0.65
PTPN2-201ENST00000309660 DPTQ07507 201 aa11□□□□□ -0.65
PTPN2-201ENST00000309660 OR5D16Q8NGK9 328 aa11□□□□□ -0.65
PTPN2-201ENST00000309660 SP7Q8TDD2 431 aaPredicted RBP11□□□□□ -0.65
PTPN2-201ENST00000309660 CNDP2Q96KP4 475 aaKnown RBP11□□□□□ -0.65
PTPN2-201ENST00000309660 IL4I1Q96RQ9 567 aa11□□□□□ -0.65
PTPN2-201ENST00000309660 TAS2R16Q9NYV7 291 aa11□□□□□ -0.65
PTPN2-201ENST00000309660 EYSQ5T1H1 3165 aa11□□□□□ -0.65
PTPN2-201ENST00000309660 TRBV23OR9-2A0A075B6M9 112 aa11□□□□□ -0.65
PTPN2-201ENST00000309660 ANKRD33BA6NCL7 494 aa11□□□□□ -0.65
PTPN2-201ENST00000309660 SLC31A1O15431 190 aa11□□□□□ -0.65
PTPN2-201ENST00000309660 NME6O75414 186 aaPredicted RBP11□□□□□ -0.65
PTPN2-201ENST00000309660 STSP08842 583 aa11□□□□□ -0.65
PTPN2-201ENST00000309660 CCR3P51677 355 aa11□□□□□ -0.65
PTPN2-201ENST00000309660 FADDQ13158 208 aa11□□□□□ -0.65
PTPN2-201ENST00000309660 HEPACAMQ14CZ8 416 aa11□□□□□ -0.65
PTPN2-201ENST00000309660 ZNF630Q2M218 657 aaPredicted RBP11□□□□□ -0.65
PTPN2-201ENST00000309660 PIP5KL1Q5T9C9 394 aa11□□□□□ -0.65
PTPN2-201ENST00000309660 UNC5DQ6UXZ4 953 aa11□□□□□ -0.65
PTPN2-201ENST00000309660 ANKRD13BQ86YJ7 626 aa11□□□□□ -0.65
PTPN2-201ENST00000309660 CCDC103Q8IW40 242 aa11□□□□□ -0.65
PTPN2-201ENST00000309660 OR14C36Q8NHC7 312 aa11□□□□□ -0.65
PTPN2-201ENST00000309660 APH1BQ8WW43 257 aa11□□□□□ -0.65
PTPN2-201ENST00000309660 GEMIN6Q8WXD5 167 aaKnown RBP11□□□□□ -0.65
PTPN2-201ENST00000309660 TMEM19Q96HH6 336 aa11□□□□□ -0.65
PTPN2-201ENST00000309660 SPATA9Q9BWV2 254 aa11□□□□□ -0.65
PTPN2-201ENST00000309660 C11orf16Q9NQ32 467 aa11□□□□□ -0.65
PTPN2-201ENST00000309660 MTCL1Q9Y4B5 1905 aaKnown RBP11□□□□□ -0.65
PTPN2-201ENST00000309660 H3BN98 237 aa11□□□□□ -0.65
PTPN2-201ENST00000309660 SLC28A2O43868 658 aa11□□□□□ -0.65
PTPN2-201ENST00000309660 TMPRSS11DO60235 418 aa11□□□□□ -0.65
PTPN2-201ENST00000309660 LCMT2O60294 686 aaKnown RBP11□□□□□ -0.65
PTPN2-201ENST00000309660 C8orf89P0DMQ9 161 aa11□□□□□ -0.65
PTPN2-201ENST00000309660 ITGA2P17301 1181 aa11□□□□□ -0.65
PTPN2-201ENST00000309660 DRD3P35462 400 aa11□□□□□ -0.65
PTPN2-201ENST00000309660 IDUAP35475 653 aa11□□□□□ -0.65
PTPN2-201ENST00000309660 UBE3AQ05086 875 aa11□□□□□ -0.65
PTPN2-201ENST00000309660 RUNX3Q13761 415 aa11□□□□□ -0.65
PTPN2-201ENST00000309660 FAM46CQ5VWP2 391 aa11□□□□□ -0.65
PTPN2-201ENST00000309660 LCTLQ6UWM7 567 aa11□□□□□ -0.65
PTPN2-201ENST00000309660 ZNF765Q7L2R6 523 aa11□□□□□ -0.65
PTPN2-201ENST00000309660 FAM129CQ86XR2 697 aa11□□□□□ -0.65
PTPN2-201ENST00000309660 RBM45Q8IUH3 476 aaKnown RBP11□□□□□ -0.65
PTPN2-201ENST00000309660 CACTIN-AS1Q8N1I8 211 aa11□□□□□ -0.65
PTPN2-201ENST00000309660 DRAXINQ8NBI3 349 aaPredicted RBP11□□□□□ -0.65
PTPN2-201ENST00000309660 OR5K2Q8NHB8 316 aa11□□□□□ -0.65
PTPN2-201ENST00000309660 SETD7Q8WTS6 366 aaKnown RBP11□□□□□ -0.65
PTPN2-201ENST00000309660 HRASLS5Q96KN8 279 aa11□□□□□ -0.65
PTPN2-201ENST00000309660 COL21A1Q96P44 957 aa11□□□□□ -0.65
PTPN2-201ENST00000309660 ALPK1Q96QP1 1244 aa11□□□□□ -0.65
PTPN2-201ENST00000309660 ZNF347Q96SE7 839 aa11□□□□□ -0.65
PTPN2-201ENST00000309660 STON1Q9Y6Q2 735 aa11□□□□□ -0.65
PTPN2-201ENST00000309660 KLHL33A6NCF5 533 aa10.99□□□□□ -0.65
PTPN2-201ENST00000309660 CAPN5O15484 640 aaPredicted RBP10.99□□□□□ -0.65
PTPN2-201ENST00000309660 RPN2P04844 631 aa10.99□□□□□ -0.65
PTPN2-201ENST00000309660 HOXB3P14651 431 aaPredicted RBP10.99□□□□□ -0.65
PTPN2-201ENST00000309660 OPRD1P41143 372 aa10.99□□□□□ -0.65
PTPN2-201ENST00000309660 PDE7AQ13946 482 aa10.99□□□□□ -0.65
PTPN2-201ENST00000309660 CST6Q15828 149 aa10.99□□□□□ -0.65
PTPN2-201ENST00000309660 MICAQ29983 383 aa10.99□□□□□ -0.65
PTPN2-201ENST00000309660 REEP3Q6NUK4 255 aa10.99□□□□□ -0.65
PTPN2-201ENST00000309660 PAGE2Q7Z2X7 111 aa10.99□□□□□ -0.65
PTPN2-201ENST00000309660 IGFN1Q86VF2 1251 aa10.99□□□□□ -0.65
PTPN2-201ENST00000309660 SLC38A5Q8WUX1 472 aa10.99□□□□□ -0.65
PTPN2-201ENST00000309660 SMPDL3AQ92484 453 aa10.99□□□□□ -0.65
PTPN2-201ENST00000309660 TM4SF18Q96CE8 201 aa10.99□□□□□ -0.65
PTPN2-201ENST00000309660 ZHX1-C8orf76Q96EF9 292 aa10.99□□□□□ -0.65
PTPN2-201ENST00000309660 WDR34Q96EX3 536 aa10.99□□□□□ -0.65
PTPN2-201ENST00000309660 LINC00615Q96LM1 132 aaPredicted RBP10.99□□□□□ -0.65
PTPN2-201ENST00000309660 ALOXE3Q9BYJ1 711 aa10.99□□□□□ -0.65
PTPN2-201ENST00000309660 KCNK12Q9HB15 430 aa10.99□□□□□ -0.65
PTPN2-201ENST00000309660 CCNB1IP1Q9NPC3 277 aa10.99□□□□□ -0.65
PTPN2-201ENST00000309660 SPATA7Q9P0W8 599 aa10.99□□□□□ -0.65
PTPN2-201ENST00000309660 OR10H3O60404 316 aa10.99□□□□□ -0.65
PTPN2-201ENST00000309660 CCNB2O95067 398 aa10.99□□□□□ -0.65
PTPN2-201ENST00000309660 DBTP11182 482 aaKnown RBP10.99□□□□□ -0.65
PTPN2-201ENST00000309660 ANXA8P13928 327 aa10.99□□□□□ -0.65
PTPN2-201ENST00000309660 DDCP20711 480 aa10.99□□□□□ -0.65
PTPN2-201ENST00000309660 UQCRC2P22695 453 aa10.99□□□□□ -0.65
PTPN2-201ENST00000309660 RBBP4Q09028 425 aa10.99□□□□□ -0.65
PTPN2-201ENST00000309660 SGCGQ13326 291 aa10.99□□□□□ -0.65
PTPN2-201ENST00000309660 TMEM52BQ4KMG9 183 aa10.99□□□□□ -0.65
PTPN2-201ENST00000309660 C6orf120Q7Z4R8 191 aa10.99□□□□□ -0.65
PTPN2-201ENST00000309660 LSRQ86X29 649 aaPredicted RBP10.99□□□□□ -0.65
PTPN2-201ENST00000309660 ZNF513Q8N8E2 541 aaPredicted RBP10.99□□□□□ -0.65
PTPN2-201ENST00000309660 ZNF566Q969W8 418 aa10.99□□□□□ -0.65
PTPN2-201ENST00000309660 PIP5K1AQ99755 562 aa10.99□□□□□ -0.65
PTPN2-201ENST00000309660 LRRK1Q38SD2 2015 aa10.99□□□□□ -0.65
PTPN2-201ENST00000309660 EFCAB9A8MZ26 197 aa10.99□□□□□ -0.65
PTPN2-201ENST00000309660 NDUFS4O43181 175 aa10.99□□□□□ -0.65
PTPN2-201ENST00000309660 TBX6O95947 436 aaPredicted RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms