RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 HEXBP07686 556 aa8.55□□□□□ -1.04
PDE4D-201ENST00000309641 FAM58BPP0C7Q3 252 aa8.55□□□□□ -1.04
PDE4D-201ENST00000309641 KITP10721 976 aa8.55□□□□□ -1.04
PDE4D-201ENST00000309641 ZNF10P21506 573 aaPredicted RBP8.55□□□□□ -1.04
PDE4D-201ENST00000309641 PPP2R1BP30154 601 aa8.55□□□□□ -1.04
PDE4D-201ENST00000309641 SKP1P63208 163 aa8.55□□□□□ -1.04
PDE4D-201ENST00000309641 KIAA0040Q15053 153 aa8.55□□□□□ -1.04
PDE4D-201ENST00000309641 IMPG1Q17R60 797 aa8.55□□□□□ -1.04
PDE4D-201ENST00000309641 DEFB109BQ30KR1 87 aa8.55□□□□□ -1.04
PDE4D-201ENST00000309641 RFTN2Q52LD8 501 aaPredicted RBP8.55□□□□□ -1.04
PDE4D-201ENST00000309641 CCNYL2Q5T2Q4 361 aa8.55□□□□□ -1.04
PDE4D-201ENST00000309641 FAM180BQ6P0A1 224 aa8.55□□□□□ -1.04
PDE4D-201ENST00000309641 GPR180Q86V85 440 aa8.55□□□□□ -1.04
PDE4D-201ENST00000309641 NUDT13Q86X67 352 aa8.55□□□□□ -1.04
PDE4D-201ENST00000309641 OR4N5Q8IXE1 308 aa8.55□□□□□ -1.04
PDE4D-201ENST00000309641 SNRNP27Q8WVK2 155 aaKnown RBP8.55□□□□□ -1.04
PDE4D-201ENST00000309641 OR1F2PQ96R84 312 aa8.55□□□□□ -1.04
PDE4D-201ENST00000309641 NPLQ9BXD5 320 aaPredicted RBP8.55□□□□□ -1.04
PDE4D-201ENST00000309641 C14orf105Q9NVL8 296 aa8.55□□□□□ -1.04
PDE4D-201ENST00000309641 THAP1Q9NVV9 213 aa8.55□□□□□ -1.04
PDE4D-201ENST00000309641 C5AR2Q9P296 337 aa8.55□□□□□ -1.04
PDE4D-201ENST00000309641 HAO1Q9UJM8 370 aa8.55□□□□□ -1.04
PDE4D-201ENST00000309641 DLGAP4Q9Y2H0 992 aa8.55□□□□□ -1.04
PDE4D-201ENST00000309641 POLR3HQ9Y535 204 aaPredicted RBP8.55□□□□□ -1.04
PDE4D-201ENST00000309641 NUP210LQ5VU65 1888 aa8.55□□□□□ -1.04
PDE4D-201ENST00000309641 LSM1O15116 133 aaKnown RBP8.54□□□□□ -1.04
PDE4D-201ENST00000309641 PGRMC2O15173 223 aa8.54□□□□□ -1.04
PDE4D-201ENST00000309641 PRMT3O60678 531 aa8.54□□□□□ -1.04
PDE4D-201ENST00000309641 AIFM1O95831 613 aa8.54□□□□□ -1.04
PDE4D-201ENST00000309641 CPN2P22792 545 aa8.54□□□□□ -1.04
PDE4D-201ENST00000309641 TACR1P25103 407 aa8.54□□□□□ -1.04
PDE4D-201ENST00000309641 TSFMP43897 325 aaKnown RBP8.54□□□□□ -1.04
PDE4D-201ENST00000309641 RPL14P50914 215 aaKnown RBP8.54□□□□□ -1.04
PDE4D-201ENST00000309641 UCNP55089 124 aa8.54□□□□□ -1.04
PDE4D-201ENST00000309641 MC1RQ01726 317 aa8.54□□□□□ -1.04
PDE4D-201ENST00000309641 EEF1A2Q05639 463 aaKnown RBP8.54□□□□□ -1.04
PDE4D-201ENST00000309641 ACSM2AQ08AH3 577 aa8.54□□□□□ -1.04
PDE4D-201ENST00000309641 NR6A1Q15406 480 aa8.54□□□□□ -1.04
PDE4D-201ENST00000309641 NSDHLQ15738 373 aa8.54□□□□□ -1.04
PDE4D-201ENST00000309641 TUBB8Q3ZCM7 444 aa8.54□□□□□ -1.04
PDE4D-201ENST00000309641 XKR7Q5GH72 579 aa8.54□□□□□ -1.04
PDE4D-201ENST00000309641 VWA5B1Q5TIE3 1220 aa8.54□□□□□ -1.04
PDE4D-201ENST00000309641 ACSM2BQ68CK6 577 aa8.54□□□□□ -1.04
PDE4D-201ENST00000309641 NIPAL1Q6NVV3 410 aa8.54□□□□□ -1.04
PDE4D-201ENST00000309641 CYP20A1Q6UW02 462 aa8.54□□□□□ -1.04
PDE4D-201ENST00000309641 OR11G2Q8NGC1 345 aa8.54□□□□□ -1.04
PDE4D-201ENST00000309641 EXTL1Q92935 676 aa8.54□□□□□ -1.04
PDE4D-201ENST00000309641 TM4SF18Q96CE8 201 aa8.54□□□□□ -1.04
PDE4D-201ENST00000309641 EGLN2Q96KS0 407 aa8.54□□□□□ -1.04
PDE4D-201ENST00000309641 PTCHD1Q96NR3 888 aa8.54□□□□□ -1.04
PDE4D-201ENST00000309641 TRIM55Q9BYV6 548 aa8.54□□□□□ -1.04
PDE4D-201ENST00000309641 ROGDIQ9GZN7 287 aa8.54□□□□□ -1.04
PDE4D-201ENST00000309641 CLK4Q9HAZ1 481 aaKnown RBP8.54□□□□□ -1.04
PDE4D-201ENST00000309641 LYRM4Q9HD34 91 aa8.54□□□□□ -1.04
PDE4D-201ENST00000309641 P4HTMQ9NXG6 502 aa8.54□□□□□ -1.04
PDE4D-201ENST00000309641 CHD6Q8TD26 2715 aa8.54□□□□□ -1.04
PDE4D-201ENST00000309641 BSNQ9UPA5 3926 aa8.54□□□□□ -1.04
PDE4D-201ENST00000309641 IGKV3D-11A0A0A0MRZ8 115 aa8.54□□□□□ -1.04
PDE4D-201ENST00000309641 ARGFXA6NJG6 315 aa8.54□□□□□ -1.04
PDE4D-201ENST00000309641 KLF11O14901 512 aa8.54□□□□□ -1.04
PDE4D-201ENST00000309641 PCDH7O60245 1069 aa8.54□□□□□ -1.04
PDE4D-201ENST00000309641 PEX11AO75192 247 aa8.54□□□□□ -1.04
PDE4D-201ENST00000309641 SEC22BO75396 215 aa8.54□□□□□ -1.04
PDE4D-201ENST00000309641 RSL1D1O76021 490 aaKnown RBP8.54□□□□□ -1.04
PDE4D-201ENST00000309641 CELA2AP08217 269 aa8.54□□□□□ -1.04
PDE4D-201ENST00000309641 C8orf89P0DMQ9 161 aa8.54□□□□□ -1.04
PDE4D-201ENST00000309641 ARFIP1P53367 373 aa8.54□□□□□ -1.04
PDE4D-201ENST00000309641 MAPK12P53778 367 aa8.54□□□□□ -1.04
PDE4D-201ENST00000309641 ZNF33BQ06732 778 aa8.54□□□□□ -1.04
PDE4D-201ENST00000309641 SLC13A2Q13183 592 aa8.54□□□□□ -1.04
PDE4D-201ENST00000309641 ZNF750Q32MQ0 723 aa8.54□□□□□ -1.04
PDE4D-201ENST00000309641 GALNTL6Q49A17 601 aa8.54□□□□□ -1.04
PDE4D-201ENST00000309641 HSP90B2PQ58FF3 399 aa8.54□□□□□ -1.04
PDE4D-201ENST00000309641 ATG16L1Q676U5 607 aa8.54□□□□□ -1.04
PDE4D-201ENST00000309641 TMEM205Q6UW68 189 aa8.54□□□□□ -1.04
PDE4D-201ENST00000309641 FAM47EQ6ZV65 393 aa8.54□□□□□ -1.04
PDE4D-201ENST00000309641 MAVSQ7Z434 540 aa8.54□□□□□ -1.04
PDE4D-201ENST00000309641 SCUBE1Q8IWY4 988 aa8.54□□□□□ -1.04
PDE4D-201ENST00000309641 ZSCAN1Q8NBB4 408 aa8.54□□□□□ -1.04
PDE4D-201ENST00000309641 DOK4Q8TEW6 326 aa8.54□□□□□ -1.04
PDE4D-201ENST00000309641 DYDC1Q8WWB3 177 aa8.54□□□□□ -1.04
PDE4D-201ENST00000309641 CKAP2Q8WWK9 683 aa8.54□□□□□ -1.04
PDE4D-201ENST00000309641 ANKRD9Q96BM1 317 aaPredicted RBP8.54□□□□□ -1.04
PDE4D-201ENST00000309641 C19orf60Q96EN9 201 aa8.54□□□□□ -1.04
PDE4D-201ENST00000309641 WDR77Q9BQA1 342 aaPredicted RBP8.54□□□□□ -1.04
PDE4D-201ENST00000309641 NUF2Q9BZD4 464 aa8.54□□□□□ -1.04
PDE4D-201ENST00000309641 FAM117AQ9C073 453 aa8.54□□□□□ -1.04
PDE4D-201ENST00000309641 RPF2Q9H7B2 306 aaKnown RBP8.54□□□□□ -1.04
PDE4D-201ENST00000309641 LRTM1Q9HBL6 345 aa8.54□□□□□ -1.04
PDE4D-201ENST00000309641 MED4Q9NPJ6 270 aa8.54□□□□□ -1.04
PDE4D-201ENST00000309641 PRTFDC1Q9NRG1 225 aa8.54□□□□□ -1.04
PDE4D-201ENST00000309641 SEMA3GQ9NS98 782 aa8.54□□□□□ -1.04
PDE4D-201ENST00000309641 AHSPQ9NZD4 102 aa8.54□□□□□ -1.04
PDE4D-201ENST00000309641 HEY2Q9UBP5 337 aa8.54□□□□□ -1.04
PDE4D-201ENST00000309641 FBXL4Q9UKA2 621 aa8.54□□□□□ -1.04
PDE4D-201ENST00000309641 KCNMB2Q9Y691 235 aa8.54□□□□□ -1.04
PDE4D-201ENST00000309641 SPENQ96T58 3664 aaKnown RBP8.53□□□□□ -1.04
PDE4D-201ENST00000309641 GNG14A0A1W2PPG7 69 aa8.53□□□□□ -1.04
PDE4D-201ENST00000309641 A8MUA0 341 aa8.53□□□□□ -1.04
PDE4D-201ENST00000309641 SLC28A1O00337 649 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms