RNA–Protein interactions for RNA: ENST00000309190.9

CAST-201, Transcript of calpastatin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAST, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-201ENST00000309190 SHQ1Q6PI26 577 aaKnown RBP4.71□□□□□ -1.66
CAST-201ENST00000309190 FIGNL1Q6PIW4 674 aa4.71□□□□□ -1.66
CAST-201ENST00000309190 ZYG11AQ6WRX3 759 aa4.71□□□□□ -1.66
CAST-201ENST00000309190 LARP4Q71RC2 724 aaKnown RBP eCLIP4.71□□□□□ -1.66
CAST-201ENST00000309190 LAPTM4BQ86VI4 370 aa4.71□□□□□ -1.66
CAST-201ENST00000309190 RAB42Q8N4Z0 105 aa4.71□□□□□ -1.66
CAST-201ENST00000309190 NLGN4YQ8NFZ3 816 aaPredicted RBP4.71□□□□□ -1.66
CAST-201ENST00000309190 RP9Q8TA86 221 aaKnown RBP4.71□□□□□ -1.66
CAST-201ENST00000309190 CHPT1Q8WUD6 406 aa4.71□□□□□ -1.66
CAST-201ENST00000309190 ASB11Q8WXH4 323 aa4.71□□□□□ -1.66
CAST-201ENST00000309190 MR1Q95460 341 aa4.71□□□□□ -1.66
CAST-201ENST00000309190 MAL2Q969L2 176 aa4.71□□□□□ -1.66
CAST-201ENST00000309190 KIAA1191Q96A73 305 aa4.71□□□□□ -1.66
CAST-201ENST00000309190 CIDECQ96AQ7 238 aaPredicted RBP4.71□□□□□ -1.66
CAST-201ENST00000309190 RHBDF1Q96CC6 855 aa4.71□□□□□ -1.66
CAST-201ENST00000309190 PCDHAC1Q9H158 963 aa4.71□□□□□ -1.66
CAST-201ENST00000309190 RPF2Q9H7B2 306 aaKnown RBP4.71□□□□□ -1.66
CAST-201ENST00000309190 NTN4Q9HB63 628 aa4.71□□□□□ -1.66
CAST-201ENST00000309190 SLC2A4RGQ9NR83 387 aa4.71□□□□□ -1.66
CAST-201ENST00000309190 INTS10Q9NVR2 710 aaKnown RBP4.71□□□□□ -1.66
CAST-201ENST00000309190 COPG1Q9Y678 874 aaKnown RBP4.71□□□□□ -1.66
CAST-201ENST00000309190 AP4B1Q9Y6B7 739 aa4.71□□□□□ -1.66
CAST-201ENST00000309190 COLEC10Q9Y6Z7 277 aa4.71□□□□□ -1.66
CAST-201ENST00000309190 NOTCH3Q9UM47 2321 aa4.71□□□□□ -1.66
CAST-201ENST00000309190 ACANP16112 2415 aa4.7□□□□□ -1.66
CAST-201ENST00000309190 TEP1Q99973 2627 aaKnown RBP4.7□□□□□ -1.66
CAST-201ENST00000309190 ADAMTS9Q9P2N4 1935 aa4.7□□□□□ -1.66
CAST-201ENST00000309190 PSMD12O00232 456 aaPredicted RBP4.7□□□□□ -1.66
CAST-201ENST00000309190 SEC14L2O76054 403 aa4.7□□□□□ -1.66
CAST-201ENST00000309190 UBXN7O94888 489 aa4.7□□□□□ -1.66
CAST-201ENST00000309190 ATE1O95260 518 aa4.7□□□□□ -1.66
CAST-201ENST00000309190 TNFRSF1BP20333 461 aa4.7□□□□□ -1.66
CAST-201ENST00000309190 PRSS12P56730 875 aa4.7□□□□□ -1.66
CAST-201ENST00000309190 HOXC5Q00444 222 aa4.7□□□□□ -1.66
CAST-201ENST00000309190 RHDQ02161 417 aa4.7□□□□□ -1.66
CAST-201ENST00000309190 ATP6AP1Q15904 470 aa4.7□□□□□ -1.66
CAST-201ENST00000309190 CCDC153Q494R4 210 aa4.7□□□□□ -1.66
CAST-201ENST00000309190 SPANXN4Q5MJ08 99 aa4.7□□□□□ -1.66
CAST-201ENST00000309190 KIAA1161Q6NSJ0 714 aa4.7□□□□□ -1.66
CAST-201ENST00000309190 ZFP1Q6P2D0 407 aa4.7□□□□□ -1.66
CAST-201ENST00000309190 SLC2A7Q6PXP3 512 aa4.7□□□□□ -1.66
CAST-201ENST00000309190 CYP20A1Q6UW02 462 aa4.7□□□□□ -1.66
CAST-201ENST00000309190 KIAA0408Q6ZU52 694 aa4.7□□□□□ -1.66
CAST-201ENST00000309190 ASCL5Q7RTU5 278 aa4.7□□□□□ -1.66
CAST-201ENST00000309190 DEFB107AQ8IZN7 70 aa4.7□□□□□ -1.66
CAST-201ENST00000309190 OR7G3Q8NG95 312 aa4.7□□□□□ -1.66
CAST-201ENST00000309190 BAHD1Q8TBE0 780 aaPredicted RBP4.7□□□□□ -1.66
CAST-201ENST00000309190 TRIM63Q969Q1 353 aa4.7□□□□□ -1.66
CAST-201ENST00000309190 C19orf60Q96EN9 201 aa4.7□□□□□ -1.66
CAST-201ENST00000309190 PPP1R2P1Q96PQ5 205 aa4.7□□□□□ -1.66
CAST-201ENST00000309190 ATOH8Q96SQ7 321 aa4.7□□□□□ -1.66
CAST-201ENST00000309190 TCF12Q99081 682 aa4.7□□□□□ -1.66
CAST-201ENST00000309190 PRR14Q9BWN1 585 aa4.7□□□□□ -1.66
CAST-201ENST00000309190 DPY30Q9C005 99 aa4.7□□□□□ -1.66
CAST-201ENST00000309190 REXO4Q9GZR2 422 aaKnown RBP4.7□□□□□ -1.66
CAST-201ENST00000309190 SEMA6CQ9H3T2 930 aa4.7□□□□□ -1.66
CAST-201ENST00000309190 FGF21Q9NSA1 209 aa4.7□□□□□ -1.66
CAST-201ENST00000309190 NSMCE4AQ9NXX6 385 aa4.7□□□□□ -1.66
CAST-201ENST00000309190 BCAP29Q9UHQ4 241 aa4.7□□□□□ -1.66
CAST-201ENST00000309190 PTBP2Q9UKA9 531 aaKnown RBP4.7□□□□□ -1.66
CAST-201ENST00000309190 B3GNT3Q9Y2A9 372 aa4.7□□□□□ -1.66
CAST-201ENST00000309190 BOLA1Q9Y3E2 137 aa4.7□□□□□ -1.66
CAST-201ENST00000309190 ESPL1Q14674 2120 aa4.7□□□□□ -1.66
CAST-201ENST00000309190 TTC36A6NLP5 189 aa4.7□□□□□ -1.66
CAST-201ENST00000309190 AGAP14A8MT82 685 aa4.7□□□□□ -1.66
CAST-201ENST00000309190 SOCS2O14508 198 aa4.7□□□□□ -1.66
CAST-201ENST00000309190 HNRNPRO43390 633 aaKnown RBP4.7□□□□□ -1.66
CAST-201ENST00000309190 H2AFYO75367 372 aaKnown RBP4.7□□□□□ -1.66
CAST-201ENST00000309190 EEDO75530 441 aaKnown RBP4.7□□□□□ -1.66
CAST-201ENST00000309190 PIAS2O75928 621 aa4.7□□□□□ -1.66
CAST-201ENST00000309190 IL33O95760 270 aa4.7□□□□□ -1.66
CAST-201ENST00000309190 KRT6AP02538 564 aa4.7□□□□□ -1.66
CAST-201ENST00000309190 KRT6BP04259 564 aa4.7□□□□□ -1.66
CAST-201ENST00000309190 PORP16435 677 aaPredicted RBP4.7□□□□□ -1.66
CAST-201ENST00000309190 NT5EP21589 574 aa4.7□□□□□ -1.66
CAST-201ENST00000309190 CRATP43155 626 aa4.7□□□□□ -1.66
CAST-201ENST00000309190 KRT6CP48668 564 aa4.7□□□□□ -1.66
CAST-201ENST00000309190 ATP4BP51164 291 aa4.7□□□□□ -1.66
CAST-201ENST00000309190 SUOXP51687 545 aa4.7□□□□□ -1.66
CAST-201ENST00000309190 HERVK_113P63132 956 aa4.7□□□□□ -1.66
CAST-201ENST00000309190 IFITM3Q01628 133 aa4.7□□□□□ -1.66
CAST-201ENST00000309190 SNTA1Q13424 505 aa4.7□□□□□ -1.66
CAST-201ENST00000309190 CYP2A13Q16696 494 aa4.7□□□□□ -1.66
CAST-201ENST00000309190 ACBD5Q5T8D3 534 aaPredicted RBP4.7□□□□□ -1.66
CAST-201ENST00000309190 ZCCHC8Q6NZY4 707 aaKnown RBP4.7□□□□□ -1.66
CAST-201ENST00000309190 FIGLAQ6QHK4 219 aa4.7□□□□□ -1.66
CAST-201ENST00000309190 TMPRSS9Q7Z410 1059 aa4.7□□□□□ -1.66
CAST-201ENST00000309190 RETREG3Q86VR2 466 aa4.7□□□□□ -1.66
CAST-201ENST00000309190 TRIM42Q8IWZ5 723 aa4.7□□□□□ -1.66
CAST-201ENST00000309190 DDHD1Q8NEL9 900 aa4.7□□□□□ -1.66
CAST-201ENST00000309190 OR13F1Q8NGS4 319 aa4.7□□□□□ -1.66
CAST-201ENST00000309190 OR2L2Q8NH16 312 aa4.7□□□□□ -1.66
CAST-201ENST00000309190 VMP1Q96GC9 406 aa4.7□□□□□ -1.66
CAST-201ENST00000309190 BBS4Q96RK4 519 aa4.7□□□□□ -1.66
CAST-201ENST00000309190 ERVK-6Q9BXR3 956 aa4.7□□□□□ -1.66
CAST-201ENST00000309190 CD244Q9BZW8 370 aa4.7□□□□□ -1.66
CAST-201ENST00000309190 SYNPO2LQ9H987 977 aa4.7□□□□□ -1.66
CAST-201ENST00000309190 C11orf16Q9NQ32 467 aa4.7□□□□□ -1.66
CAST-201ENST00000309190 OCIAD1Q9NX40 245 aa4.7□□□□□ -1.66
CAST-201ENST00000309190 ACTR10Q9NZ32 417 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms