RNA–Protein interactions for RNA: ENST00000308271.13

USP48-201, Transcript of ubiquitin specific peptidase 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP48, Length 4,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-201ENST00000308271 SWI5Q1ZZU3 235 aa18.54■□□□□ 0.56
USP48-201ENST00000308271 ZNF648Q5T619 568 aaPredicted RBP18.54■□□□□ 0.56
USP48-201ENST00000308271 TPGS2Q68CL5 300 aa18.54■□□□□ 0.56
USP48-201ENST00000308271 ANKRD54Q6NXT1 300 aa18.54■□□□□ 0.56
USP48-201ENST00000308271 LHFPL3Q86UP9 236 aa18.54■□□□□ 0.56
USP48-201ENST00000308271 ADGRG2Q8IZP9 1017 aa18.54■□□□□ 0.56
USP48-201ENST00000308271 B3GNT7Q8NFL0 401 aa18.54■□□□□ 0.56
USP48-201ENST00000308271 CD180Q99467 661 aa18.54■□□□□ 0.56
USP48-201ENST00000308271 NLGN3Q9NZ94 848 aa18.54■□□□□ 0.56
USP48-201ENST00000308271 A0A0X1KG70 313 aa18.53■□□□□ 0.56
USP48-201ENST00000308271 PFKLP17858 780 aa18.53■□□□□ 0.56
USP48-201ENST00000308271 FLT3LGP49771 235 aa18.53■□□□□ 0.56
USP48-201ENST00000308271 CDKN1CP49918 316 aaPredicted RBP18.53■□□□□ 0.56
USP48-201ENST00000308271 PSMA6P60900 246 aaKnown RBP18.53■□□□□ 0.56
USP48-201ENST00000308271 TRAM1Q15629 374 aa18.53■□□□□ 0.56
USP48-201ENST00000308271 GID4Q8IVV7 300 aa18.53■□□□□ 0.56
USP48-201ENST00000308271 ZNF248Q8NDW4 579 aa18.53■□□□□ 0.56
USP48-201ENST00000308271 KCNN1Q92952 543 aa18.53■□□□□ 0.56
USP48-201ENST00000308271 MAL2Q969L2 176 aa18.53■□□□□ 0.56
USP48-201ENST00000308271 GPR78Q96P69 363 aa18.53■□□□□ 0.56
USP48-201ENST00000308271 SLC35C2Q9NQQ7 365 aa18.53■□□□□ 0.56
USP48-201ENST00000308271 TAS2R10Q9NYW0 307 aa18.53■□□□□ 0.56
USP48-201ENST00000308271 A3GALT2U3KPV4 340 aa18.53■□□□□ 0.56
USP48-201ENST00000308271 COL22A1Q8NFW1 1626 aaPredicted RBP18.53■□□□□ 0.56
USP48-201ENST00000308271 FLRT2O43155 660 aa18.53■□□□□ 0.56
USP48-201ENST00000308271 PROM1O43490 865 aa18.53■□□□□ 0.56
USP48-201ENST00000308271 UGT2B10P36537 528 aa18.53■□□□□ 0.56
USP48-201ENST00000308271 AP2S1P53680 142 aaPredicted RBP18.53■□□□□ 0.56
USP48-201ENST00000308271 ADAM8P78325 824 aa18.53■□□□□ 0.56
USP48-201ENST00000308271 SLC30A6Q6NXT4 461 aa18.53■□□□□ 0.56
USP48-201ENST00000308271 FAM217AQ8IXS0 508 aa18.53■□□□□ 0.56
USP48-201ENST00000308271 COX18Q8N8Q8 333 aa18.53■□□□□ 0.56
USP48-201ENST00000308271 OR56A1Q8NGH5 318 aa18.53■□□□□ 0.56
USP48-201ENST00000308271 ADAMTS16Q8TE57 1224 aa18.53■□□□□ 0.56
USP48-201ENST00000308271 NT5C3BQ969T7 300 aa18.53■□□□□ 0.56
USP48-201ENST00000308271 LGR4Q9BXB1 951 aa18.53■□□□□ 0.56
USP48-201ENST00000308271 BEX1Q9HBH7 125 aa18.53■□□□□ 0.56
USP48-201ENST00000308271 DOCK2Q92608 1830 aa18.53■□□□□ 0.56
USP48-201ENST00000308271 UPK3BL1B0FP48 263 aa18.53■□□□□ 0.56
USP48-201ENST00000308271 UPK3BL2E5RIL1 263 aa18.53■□□□□ 0.56
USP48-201ENST00000308271 MMP20O60882 483 aa18.53■□□□□ 0.56
USP48-201ENST00000308271 ADH1CP00326 375 aa18.53■□□□□ 0.56
USP48-201ENST00000308271 PCGF2P35227 344 aa18.53■□□□□ 0.56
USP48-201ENST00000308271 RPS5P46782 204 aaKnown RBP18.53■□□□□ 0.56
USP48-201ENST00000308271 XKR4Q5GH76 650 aa18.53■□□□□ 0.56
USP48-201ENST00000308271 GDF6Q6KF10 455 aaPredicted RBP18.53■□□□□ 0.56
USP48-201ENST00000308271 CBLL1Q75N03 491 aa18.53■□□□□ 0.56
USP48-201ENST00000308271 SIMC1Q8NDZ2 872 aa18.53■□□□□ 0.56
USP48-201ENST00000308271 SECISBP2Q96T21 854 aaKnown RBP18.53■□□□□ 0.56
USP48-201ENST00000308271 NTMT1Q9BV86 223 aa18.53■□□□□ 0.56
USP48-201ENST00000308271 DPCDQ9BVM2 203 aaPredicted RBP18.53■□□□□ 0.56
USP48-201ENST00000308271 SLC6A15Q9H2J7 730 aa18.53■□□□□ 0.56
USP48-201ENST00000308271 COPZ2Q9P299 210 aa18.53■□□□□ 0.56
USP48-201ENST00000308271 UTS2RQ9UKP6 389 aa18.53■□□□□ 0.56
USP48-201ENST00000308271 NUP50Q9UKX7 468 aa18.53■□□□□ 0.56
USP48-201ENST00000308271 MRPS23Q9Y3D9 190 aaKnown RBP18.53■□□□□ 0.56
USP48-201ENST00000308271 IQCMA0A1B0GVH7 501 aa18.52■□□□□ 0.56
USP48-201ENST00000308271 A0A1W2PQ09 198 aa18.52■□□□□ 0.56
USP48-201ENST00000308271 ZNF623O75123 536 aa18.52■□□□□ 0.56
USP48-201ENST00000308271 SDC1P18827 310 aa18.52■□□□□ 0.56
USP48-201ENST00000308271 CCL23P55773 120 aa18.52■□□□□ 0.56
USP48-201ENST00000308271 SNAP47Q5SQN1 464 aa18.52■□□□□ 0.56
USP48-201ENST00000308271 HIST2H2ABQ8IUE6 130 aaPredicted RBP18.52■□□□□ 0.56
USP48-201ENST00000308271 OR51G2Q8NGK0 314 aa18.52■□□□□ 0.56
USP48-201ENST00000308271 GATAD2BQ8WXI9 593 aa18.52■□□□□ 0.56
USP48-201ENST00000308271 PPIEQ9UNP9 301 aaKnown RBP18.52■□□□□ 0.56
USP48-201ENST00000308271 SLC35G6P0C7Q6 338 aa18.52■□□□□ 0.56
USP48-201ENST00000308271 SCRN3Q0VDG4 424 aa18.52■□□□□ 0.56
USP48-201ENST00000308271 RAB41Q5JT25 222 aa18.52■□□□□ 0.56
USP48-201ENST00000308271 PIANPQ8IYJ0 282 aa18.52■□□□□ 0.56
USP48-201ENST00000308271 OR6K6Q8NGW6 343 aa18.52■□□□□ 0.56
USP48-201ENST00000308271 BBS10Q8TAM1 723 aa18.52■□□□□ 0.56
USP48-201ENST00000308271 HCN3Q9P1Z3 774 aa18.52■□□□□ 0.56
USP48-201ENST00000308271 B4GALT6Q9UBX8 382 aa18.52■□□□□ 0.56
USP48-201ENST00000308271 CTDSP2O14595 271 aa18.52■□□□□ 0.56
USP48-201ENST00000308271 ZNF155Q12901 538 aaPredicted RBP18.52■□□□□ 0.56
USP48-201ENST00000308271 GRB14Q14449 540 aa18.52■□□□□ 0.56
USP48-201ENST00000308271 ADPRMQ3LIE5 342 aa18.52■□□□□ 0.56
USP48-201ENST00000308271 FAM180AQ6UWF9 173 aa18.52■□□□□ 0.56
USP48-201ENST00000308271 ZNF782Q6ZMW2 699 aaPredicted RBP18.52■□□□□ 0.56
USP48-201ENST00000308271 RNF111Q6ZNA4 994 aa18.52■□□□□ 0.56
USP48-201ENST00000308271 OR9Q2Q8NGE9 314 aa18.52■□□□□ 0.56
USP48-201ENST00000308271 ZSWIM3Q96MP5 696 aa18.52■□□□□ 0.56
USP48-201ENST00000308271 CROCCQ5TZA2 2017 aa18.52■□□□□ 0.55
USP48-201ENST00000308271 RREB1Q92766 1687 aa18.52■□□□□ 0.55
USP48-201ENST00000308271 A0A1W2PRQ8 180 aa18.52■□□□□ 0.55
USP48-201ENST00000308271 CACNB4O00305 520 aaPredicted RBP18.52■□□□□ 0.55
USP48-201ENST00000308271 FGF19O95750 216 aa18.52■□□□□ 0.55
USP48-201ENST00000308271 CD2P06729 351 aa18.52■□□□□ 0.55
USP48-201ENST00000308271 TACSTD2P09758 323 aa18.52■□□□□ 0.55
USP48-201ENST00000308271 HRH2P25021 359 aa18.52■□□□□ 0.55
USP48-201ENST00000308271 RGMBQ6NW40 437 aa18.52■□□□□ 0.55
USP48-201ENST00000308271 NAGSQ8N159 534 aa18.52■□□□□ 0.55
USP48-201ENST00000308271 OR9A1PQ8NGU1 263 aa18.52■□□□□ 0.55
USP48-201ENST00000308271 GPR151Q8TDV0 419 aa18.52■□□□□ 0.55
USP48-201ENST00000308271 GGHQ92820 318 aa18.52■□□□□ 0.55
USP48-201ENST00000308271 SNAPC3Q92966 411 aa18.52■□□□□ 0.55
USP48-201ENST00000308271 CHFRQ96EP1 664 aa18.52■□□□□ 0.55
USP48-201ENST00000308271 MKRN2Q9H000 416 aaKnown RBP18.52■□□□□ 0.55
USP48-201ENST00000308271 YIPF1Q9Y548 306 aa18.52■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms