RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 YY1AP1Q9H869 796 aa11.28□□□□□ -0.6
TRIM40-205ENST00000307859 SLAMF7Q9NQ25 335 aa11.28□□□□□ -0.6
TRIM40-205ENST00000307859 GPATCH2Q9NW75 528 aa11.28□□□□□ -0.6
TRIM40-205ENST00000307859 PILRAQ9UKJ1 303 aa11.28□□□□□ -0.6
TRIM40-205ENST00000307859 A0A0G2JN53 185 aa11.27□□□□□ -0.6
TRIM40-205ENST00000307859 K7ESF4 209 aa11.27□□□□□ -0.6
TRIM40-205ENST00000307859 TLR4O00206 839 aa11.27□□□□□ -0.6
TRIM40-205ENST00000307859 SOCS2O14508 198 aa11.27□□□□□ -0.6
TRIM40-205ENST00000307859 ACOX3O15254 700 aa11.27□□□□□ -0.6
TRIM40-205ENST00000307859 PDPK1O15530 556 aa11.27□□□□□ -0.6
TRIM40-205ENST00000307859 DEAF1O75398 565 aaPredicted RBP11.27□□□□□ -0.6
TRIM40-205ENST00000307859 TNFRSF21O75509 655 aa11.27□□□□□ -0.6
TRIM40-205ENST00000307859 PRKD3O94806 890 aa11.27□□□□□ -0.6
TRIM40-205ENST00000307859 SERPINA1P01009 418 aa11.27□□□□□ -0.6
TRIM40-205ENST00000307859 STATHP02808 62 aa11.27□□□□□ -0.6
TRIM40-205ENST00000307859 FAM58BPP0C7Q3 252 aa11.27□□□□□ -0.6
TRIM40-205ENST00000307859 PCGF2P35227 344 aa11.27□□□□□ -0.6
TRIM40-205ENST00000307859 ALDH9A1P49189 494 aa11.27□□□□□ -0.6
TRIM40-205ENST00000307859 RPL6Q02878 288 aaKnown RBP11.27□□□□□ -0.6
TRIM40-205ENST00000307859 FADDQ13158 208 aa11.27□□□□□ -0.6
TRIM40-205ENST00000307859 MED21Q13503 144 aa11.27□□□□□ -0.6
TRIM40-205ENST00000307859 C1orf61Q13536 156 aa11.27□□□□□ -0.6
TRIM40-205ENST00000307859 SLC9A5Q14940 896 aa11.27□□□□□ -0.6
TRIM40-205ENST00000307859 MLC1Q15049 377 aa11.27□□□□□ -0.6
TRIM40-205ENST00000307859 TMTC4Q5T4D3 741 aa11.27□□□□□ -0.6
TRIM40-205ENST00000307859 FBXO42Q6P3S6 717 aa11.27□□□□□ -0.6
TRIM40-205ENST00000307859 FIGLAQ6QHK4 219 aa11.27□□□□□ -0.6
TRIM40-205ENST00000307859 SPESP1Q6UW49 350 aa11.27□□□□□ -0.6
TRIM40-205ENST00000307859 SLC36A4Q6YBV0 504 aa11.27□□□□□ -0.6
TRIM40-205ENST00000307859 ZBTB49Q6ZSB9 765 aa11.27□□□□□ -0.6
TRIM40-205ENST00000307859 ASPGQ86U10 573 aa11.27□□□□□ -0.6
TRIM40-205ENST00000307859 MARVELD2Q8N4S9 558 aa11.27□□□□□ -0.6
TRIM40-205ENST00000307859 ACOT4Q8N9L9 421 aa11.27□□□□□ -0.6
TRIM40-205ENST00000307859 OR8K5Q8NH50 307 aa11.27□□□□□ -0.6
TRIM40-205ENST00000307859 C1orf216Q8TAB5 229 aa11.27□□□□□ -0.6
TRIM40-205ENST00000307859 GATA6Q92908 595 aa11.27□□□□□ -0.6
TRIM40-205ENST00000307859 TM4SF19Q96DZ7 209 aa11.27□□□□□ -0.6
TRIM40-205ENST00000307859 SPACA7Q96KW9 195 aa11.27□□□□□ -0.6
TRIM40-205ENST00000307859 OR2A5Q96R48 311 aa11.27□□□□□ -0.6
TRIM40-205ENST00000307859 MACROD1Q9BQ69 325 aa11.27□□□□□ -0.6
TRIM40-205ENST00000307859 DPH2Q9BQC3 489 aaPredicted RBP11.27□□□□□ -0.6
TRIM40-205ENST00000307859 IER2Q9BTL4 223 aa11.27□□□□□ -0.6
TRIM40-205ENST00000307859 C9orf16Q9BUW7 83 aa11.27□□□□□ -0.6
TRIM40-205ENST00000307859 FAIM2Q9BWQ8 316 aa11.27□□□□□ -0.6
TRIM40-205ENST00000307859 RAD21L1Q9H4I0 556 aa11.27□□□□□ -0.6
TRIM40-205ENST00000307859 Q9H521 79 aa11.27□□□□□ -0.6
TRIM40-205ENST00000307859 TM9SF3Q9HD45 589 aa11.27□□□□□ -0.6
TRIM40-205ENST00000307859 NEUROD4Q9HD90 331 aa11.27□□□□□ -0.6
TRIM40-205ENST00000307859 ACSS1Q9NUB1 689 aaPredicted RBP11.27□□□□□ -0.6
TRIM40-205ENST00000307859 EVA1BQ9NVM1 165 aa11.27□□□□□ -0.6
TRIM40-205ENST00000307859 ZNF639Q9UID6 485 aa11.27□□□□□ -0.6
TRIM40-205ENST00000307859 SAMD4AQ9UPU9 718 aaKnown RBP11.27□□□□□ -0.6
TRIM40-205ENST00000307859 ASB4Q9Y574 426 aa11.27□□□□□ -0.6
TRIM40-205ENST00000307859 AP4B1Q9Y6B7 739 aa11.27□□□□□ -0.6
TRIM40-205ENST00000307859 PCDH15Q96QU1 1955 aa11.27□□□□□ -0.61
TRIM40-205ENST00000307859 CACNA1IQ9P0X4 2223 aa11.27□□□□□ -0.61
TRIM40-205ENST00000307859 C7orf72A4D263 438 aa11.27□□□□□ -0.61
TRIM40-205ENST00000307859 SAC3D1A6NKF1 404 aa11.27□□□□□ -0.61
TRIM40-205ENST00000307859 UPK1AO00322 258 aa11.27□□□□□ -0.61
TRIM40-205ENST00000307859 AXIN1O15169 862 aa11.27□□□□□ -0.61
TRIM40-205ENST00000307859 CLOCKO15516 846 aa11.27□□□□□ -0.61
TRIM40-205ENST00000307859 CTSVO60911 334 aa11.27□□□□□ -0.61
TRIM40-205ENST00000307859 GUCY1B2O75343 617 aa11.27□□□□□ -0.61
TRIM40-205ENST00000307859 MT-ND1P03886 318 aa11.27□□□□□ -0.61
TRIM40-205ENST00000307859 PROS1P07225 676 aa11.27□□□□□ -0.61
TRIM40-205ENST00000307859 DCNP07585 359 aaKnown RBP11.27□□□□□ -0.61
TRIM40-205ENST00000307859 UQCRC2P22695 453 aa11.27□□□□□ -0.61
TRIM40-205ENST00000307859 KDELR2P33947 212 aa11.27□□□□□ -0.61
TRIM40-205ENST00000307859 HHEXQ03014 270 aa11.27□□□□□ -0.61
TRIM40-205ENST00000307859 RGS1Q08116 209 aa11.27□□□□□ -0.61
TRIM40-205ENST00000307859 TGM3Q08188 693 aa11.27□□□□□ -0.61
TRIM40-205ENST00000307859 VAC14Q08AM6 782 aa11.27□□□□□ -0.61
TRIM40-205ENST00000307859 SLAMF1Q13291 335 aa11.27□□□□□ -0.61
TRIM40-205ENST00000307859 BLMHQ13867 455 aa11.27□□□□□ -0.61
TRIM40-205ENST00000307859 C16orf72Q14CZ0 275 aa11.27□□□□□ -0.61
TRIM40-205ENST00000307859 ELOCQ15369 112 aa11.27□□□□□ -0.61
TRIM40-205ENST00000307859 NRF1Q16656 503 aa11.27□□□□□ -0.61
TRIM40-205ENST00000307859 COX20Q5RI15 118 aa11.27□□□□□ -0.61
TRIM40-205ENST00000307859 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.27□□□□□ -0.61
TRIM40-205ENST00000307859 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.27□□□□□ -0.61
TRIM40-205ENST00000307859 NDUFAF5Q5TEU4 345 aa11.27□□□□□ -0.61
TRIM40-205ENST00000307859 FKBP9P1Q75LS8 142 aa11.27□□□□□ -0.61
TRIM40-205ENST00000307859 AVL9Q8NBF6 648 aa11.27□□□□□ -0.61
TRIM40-205ENST00000307859 ZBTB44Q8NCP5 570 aa11.27□□□□□ -0.61
TRIM40-205ENST00000307859 FAM46DQ8NEK8 389 aa11.27□□□□□ -0.61
TRIM40-205ENST00000307859 PSMA8Q8TAA3 256 aa11.27□□□□□ -0.61
TRIM40-205ENST00000307859 BAHD1Q8TBE0 780 aaPredicted RBP11.27□□□□□ -0.61
TRIM40-205ENST00000307859 PYURFQ96I23 114 aa11.27□□□□□ -0.61
TRIM40-205ENST00000307859 HSPA12BQ96MM6 686 aa11.27□□□□□ -0.61
TRIM40-205ENST00000307859 BDH2Q9BUT1 245 aa11.27□□□□□ -0.61
TRIM40-205ENST00000307859 CXorf36Q9H7Y0 433 aa11.27□□□□□ -0.61
TRIM40-205ENST00000307859 NTN4Q9HB63 628 aa11.27□□□□□ -0.61
TRIM40-205ENST00000307859 ACSL6Q9UKU0 697 aa11.27□□□□□ -0.61
TRIM40-205ENST00000307859 OAZ3Q9UMX2 235 aa11.27□□□□□ -0.61
TRIM40-205ENST00000307859 AK5Q9Y6K8 562 aa11.27□□□□□ -0.61
TRIM40-205ENST00000307859 A0A0J9YY10 115 aa11.26□□□□□ -0.61
TRIM40-205ENST00000307859 A0A1W2PR48 441 aa11.26□□□□□ -0.61
TRIM40-205ENST00000307859 OR5K3A6NET4 321 aa11.26□□□□□ -0.61
TRIM40-205ENST00000307859 B4DGG1 531 aa11.26□□□□□ -0.61
TRIM40-205ENST00000307859 RASAL1O95294 804 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms