RNA–Protein interactions for RNA: ENST00000306324.3

HOXD4-201, Transcript of homeobox D4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD4, Length 1,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4-201ENST00000306324 METTL21AQ8WXB1 218 aa21.03■□□□□ 0.96
HOXD4-201ENST00000306324 PPP1R36Q96LQ0 422 aa21.03■□□□□ 0.96
HOXD4-201ENST00000306324 PFDN4Q9NQP4 134 aa21.03■□□□□ 0.96
HOXD4-201ENST00000306324 MS4A12Q9NXJ0 267 aa21.03■□□□□ 0.96
HOXD4-201ENST00000306324 MARCOQ9UEW3 520 aaPredicted RBP21.03■□□□□ 0.96
HOXD4-201ENST00000306324 ASB4Q9Y574 426 aa21.03■□□□□ 0.96
HOXD4-201ENST00000306324 MED13Q9UHV7 2174 aa21.02■□□□□ 0.96
HOXD4-201ENST00000306324 ATP6AP2A0A1C7CYW4 349 aa21.02■□□□□ 0.96
HOXD4-201ENST00000306324 GNG14A0A1W2PPG7 69 aa21.02■□□□□ 0.96
HOXD4-201ENST00000306324 CLDN4O14493 209 aa21.02■□□□□ 0.96
HOXD4-201ENST00000306324 PRMT3O60678 531 aa21.02■□□□□ 0.96
HOXD4-201ENST00000306324 ALOX12BO75342 701 aa21.02■□□□□ 0.96
HOXD4-201ENST00000306324 ATP6AP2O75787 350 aa21.02■□□□□ 0.96
HOXD4-201ENST00000306324 KITP10721 976 aa21.02■□□□□ 0.96
HOXD4-201ENST00000306324 TLX1P31314 330 aaPredicted RBP21.02■□□□□ 0.96
HOXD4-201ENST00000306324 BUD31P41223 144 aaPredicted RBP21.02■□□□□ 0.96
HOXD4-201ENST00000306324 HNRNPFP52597 415 aaKnown RBP21.02■□□□□ 0.96
HOXD4-201ENST00000306324 BTG2P78543 158 aa21.02■□□□□ 0.96
HOXD4-201ENST00000306324 RHAGQ02094 409 aa21.02■□□□□ 0.96
HOXD4-201ENST00000306324 PPP1R32Q7Z5V6 425 aa21.02■□□□□ 0.96
HOXD4-201ENST00000306324 CKAP2Q8WWK9 683 aa21.02■□□□□ 0.96
HOXD4-201ENST00000306324 C19orf60Q96EN9 201 aa21.02■□□□□ 0.96
HOXD4-201ENST00000306324 PTCHD1Q96NR3 888 aa21.02■□□□□ 0.96
HOXD4-201ENST00000306324 MESP1Q9BRJ9 268 aa21.02■□□□□ 0.96
HOXD4-201ENST00000306324 EBPLQ9BY08 206 aa21.02■□□□□ 0.96
HOXD4-201ENST00000306324 LRTM1Q9HBL6 345 aa21.02■□□□□ 0.96
HOXD4-201ENST00000306324 PRTFDC1Q9NRG1 225 aa21.02■□□□□ 0.96
HOXD4-201ENST00000306324 C1orf109Q9NX04 203 aa21.02■□□□□ 0.96
HOXD4-201ENST00000306324 MCM8Q9UJA3 840 aa21.02■□□□□ 0.96
HOXD4-201ENST00000306324 HS3ST3B1Q9Y662 390 aa21.02■□□□□ 0.96
HOXD4-201ENST00000306324 PCSK5Q92824 1860 aa21.02■□□□□ 0.96
HOXD4-201ENST00000306324 PROM1O43490 865 aa21.01■□□□□ 0.95
HOXD4-201ENST00000306324 JUNP05412 331 aaKnown RBP21.01■□□□□ 0.95
HOXD4-201ENST00000306324 C8orf89P0DMQ9 161 aa21.01■□□□□ 0.95
HOXD4-201ENST00000306324 MAOAP21397 527 aa21.01■□□□□ 0.95
HOXD4-201ENST00000306324 PRPH2P23942 346 aa21.01■□□□□ 0.95
HOXD4-201ENST00000306324 TIA1P31483 386 aaKnown RBP eCLIP21.01■□□□□ 0.95
HOXD4-201ENST00000306324 RAE1P78406 368 aaKnown RBP21.01■□□□□ 0.95
HOXD4-201ENST00000306324 TNFRSF17Q02223 184 aa21.01■□□□□ 0.95
HOXD4-201ENST00000306324 SLC13A2Q13183 592 aa21.01■□□□□ 0.95
HOXD4-201ENST00000306324 ATP1A4Q13733 1029 aa21.01■□□□□ 0.95
HOXD4-201ENST00000306324 NSDHLQ15738 373 aa21.01■□□□□ 0.95
HOXD4-201ENST00000306324 GALNTL6Q49A17 601 aa21.01■□□□□ 0.95
HOXD4-201ENST00000306324 C18orf63Q68DL7 685 aa21.01■□□□□ 0.95
HOXD4-201ENST00000306324 QSOX2Q6ZRP7 698 aa21.01■□□□□ 0.95
HOXD4-201ENST00000306324 MRGPREQ86SM8 312 aa21.01■□□□□ 0.95
HOXD4-201ENST00000306324 TSLPQ969D9 159 aa21.01■□□□□ 0.95
HOXD4-201ENST00000306324 C8orf44Q96CB5 159 aa21.01■□□□□ 0.95
HOXD4-201ENST00000306324 C3orf30Q96M34 536 aa21.01■□□□□ 0.95
HOXD4-201ENST00000306324 MAGEB18Q96M61 343 aa21.01■□□□□ 0.95
HOXD4-201ENST00000306324 CCT7Q99832 543 aa21.01■□□□□ 0.95
HOXD4-201ENST00000306324 TEX10Q9NXF1 929 aaPredicted RBP21.01■□□□□ 0.95
HOXD4-201ENST00000306324 POLHQ9Y253 713 aa21.01■□□□□ 0.95
HOXD4-201ENST00000306324 POLR3HQ9Y535 204 aaPredicted RBP21.01■□□□□ 0.95
HOXD4-201ENST00000306324 A0A1W2PR48 441 aa21.01■□□□□ 0.95
HOXD4-201ENST00000306324 PEX12O00623 359 aa21.01■□□□□ 0.95
HOXD4-201ENST00000306324 LSM1O15116 133 aaKnown RBP21.01■□□□□ 0.95
HOXD4-201ENST00000306324 PRKRAO75569 313 aaKnown RBP21.01■□□□□ 0.95
HOXD4-201ENST00000306324 MYO1DO94832 1006 aa21.01■□□□□ 0.95
HOXD4-201ENST00000306324 COL28A1Q2UY09 1125 aa21.01■□□□□ 0.95
HOXD4-201ENST00000306324 DEFB109BQ30KR1 87 aa21.01■□□□□ 0.95
HOXD4-201ENST00000306324 XKR7Q5GH72 579 aa21.01■□□□□ 0.95
HOXD4-201ENST00000306324 LANCL3Q6ZV70 420 aa21.01■□□□□ 0.95
HOXD4-201ENST00000306324 CLNKQ7Z7G1 428 aa21.01■□□□□ 0.95
HOXD4-201ENST00000306324 CRLF3Q8IUI8 442 aa21.01■□□□□ 0.95
HOXD4-201ENST00000306324 ZNF595Q8IYB9 648 aa21.01■□□□□ 0.95
HOXD4-201ENST00000306324 PLPP5Q8NEB5 264 aa21.01■□□□□ 0.95
HOXD4-201ENST00000306324 THAP4Q8WY91 577 aa21.01■□□□□ 0.95
HOXD4-201ENST00000306324 NACC2Q96BF6 587 aa21.01■□□□□ 0.95
HOXD4-201ENST00000306324 NUF2Q9BZD4 464 aa21.01■□□□□ 0.95
HOXD4-201ENST00000306324 RPF2Q9H7B2 306 aaKnown RBP21.01■□□□□ 0.95
HOXD4-201ENST00000306324 WDR41Q9HAD4 459 aa21.01■□□□□ 0.95
HOXD4-201ENST00000306324 SLCO1B3Q9NPD5 702 aa21.01■□□□□ 0.95
HOXD4-201ENST00000306324 PRDM9Q9NQV7 894 aa21.01■□□□□ 0.95
HOXD4-201ENST00000306324 RIC8BQ9NVN3 520 aa21.01■□□□□ 0.95
HOXD4-201ENST00000306324 P4HTMQ9NXG6 502 aa21.01■□□□□ 0.95
HOXD4-201ENST00000306324 GIMAP2Q9UG22 337 aa21.01■□□□□ 0.95
HOXD4-201ENST00000306324 MAN2B2Q9Y2E5 1009 aa21.01■□□□□ 0.95
HOXD4-201ENST00000306324 MMACHCQ9Y4U1 282 aa21.01■□□□□ 0.95
HOXD4-201ENST00000306324 ITPR1Q14643 2758 aa21■□□□□ 0.95
HOXD4-201ENST00000306324 NPIPB8E9PQR5 432 aa21■□□□□ 0.95
HOXD4-201ENST00000306324 SOCS6O14544 535 aa21■□□□□ 0.95
HOXD4-201ENST00000306324 PEX11AO75192 247 aa21■□□□□ 0.95
HOXD4-201ENST00000306324 GUCY1B2O75343 617 aa21■□□□□ 0.95
HOXD4-201ENST00000306324 CYC1P08574 325 aa21■□□□□ 0.95
HOXD4-201ENST00000306324 ANXA4P09525 319 aaPredicted RBP21■□□□□ 0.95
HOXD4-201ENST00000306324 NR2F6P10588 404 aa21■□□□□ 0.95
HOXD4-201ENST00000306324 ACPPP15309 386 aa21■□□□□ 0.95
HOXD4-201ENST00000306324 HSD17B7P56937 341 aa21■□□□□ 0.95
HOXD4-201ENST00000306324 RPL38P63173 70 aaKnown RBP21■□□□□ 0.95
HOXD4-201ENST00000306324 GALNT18Q6P9A2 607 aa21■□□□□ 0.95
HOXD4-201ENST00000306324 KIRREL2Q6UWL6 708 aa21■□□□□ 0.95
HOXD4-201ENST00000306324 MED25Q71SY5 747 aa21■□□□□ 0.95
HOXD4-201ENST00000306324 TUBGCP3Q96CW5 907 aa21■□□□□ 0.95
HOXD4-201ENST00000306324 C11orf24Q96F05 449 aaPredicted RBP21■□□□□ 0.95
HOXD4-201ENST00000306324 IP6K3Q96PC2 410 aa21■□□□□ 0.95
HOXD4-201ENST00000306324 NECTIN3Q9NQS3 549 aa21■□□□□ 0.95
HOXD4-201ENST00000306324 CACNA1BQ00975 2339 aa20.99■□□□□ 0.95
HOXD4-201ENST00000306324 BLACEA4D250 179 aa20.99■□□□□ 0.95
HOXD4-201ENST00000306324 GLOD5A6NK44 160 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms