RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 H7BY64 318 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 LEFTY2O00292 366 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 IFNA16P05015 189 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 ACP5P13686 325 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 UQCRC2P22695 453 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 CCR7P32248 378 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 VEZF1Q14119 521 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 NFE2L1Q14494 772 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 XKR7Q5GH72 579 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 MANEALQ5VSG8 457 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 UBE2UQ5VVX9 321 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 HSDL2Q6YN16 418 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 C7orf61Q8IZ16 206 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 OR4C6Q8NH72 309 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 GLYATL1Q969I3 302 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 UBE2FQ969M7 185 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 LRR1Q96L50 414 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 PRAP1Q96NZ9 151 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 AMBRA1Q9C0C7 1298 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 PCBD2Q9H0N5 130 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 IL37Q9NZH6 218 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 FBXO10Q9UK96 956 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 TMEM98Q9Y2Y6 226 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 ZNF831Q5JPB2 1677 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 AQP9O43315 295 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 HCN1O60741 890 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 OR12D1P0DN82 309 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 CSNK2A2P19784 350 aaPredicted RBP12.74□□□□□ -0.37
DDX54-201ENST00000306014 ACSL1P33121 698 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 MAB21L1Q13394 359 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 ADPRMQ3LIE5 342 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 LY6G5CQ5SRR4 150 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 COMMD6Q7Z4G1 85 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 GALNT13Q8IUC8 556 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 DTX3Q8N9I9 347 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 OR7G3Q8NG95 312 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 IGSF21Q96ID5 467 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 ZNF300Q96RE9 604 aaPredicted RBP12.74□□□□□ -0.37
DDX54-201ENST00000306014 P2RY13Q9BPV8 354 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 SPATA9Q9BWV2 254 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 CHIAQ9BZP6 476 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 OR2B2Q9GZK3 357 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 IFT52Q9Y366 437 aa12.74□□□□□ -0.37
DDX54-201ENST00000306014 CD9P21926 228 aa12.73□□□□□ -0.37
DDX54-201ENST00000306014 GGT2P36268 569 aa12.73□□□□□ -0.37
DDX54-201ENST00000306014 SLC14A2Q15849 920 aa12.73□□□□□ -0.37
DDX54-201ENST00000306014 MICAQ29983 383 aa12.73□□□□□ -0.37
DDX54-201ENST00000306014 ADNP2Q6IQ32 1131 aa12.73□□□□□ -0.37
DDX54-201ENST00000306014 RANBP3LQ86VV4 465 aaPredicted RBP12.73□□□□□ -0.37
DDX54-201ENST00000306014 PARGQ86W56 976 aa12.73□□□□□ -0.37
DDX54-201ENST00000306014 B3GNT7Q8NFL0 401 aa12.73□□□□□ -0.37
DDX54-201ENST00000306014 PDLIM5Q96HC4 596 aaKnown RBP12.73□□□□□ -0.37
DDX54-201ENST00000306014 CNDP2Q96KP4 475 aaKnown RBP12.73□□□□□ -0.37
DDX54-201ENST00000306014 CCDC115Q96NT0 180 aa12.73□□□□□ -0.37
DDX54-201ENST00000306014 CORINQ9Y5Q5 1042 aa12.73□□□□□ -0.37
DDX54-201ENST00000306014 NUP214P35658 2090 aaPredicted RBP12.73□□□□□ -0.37
DDX54-201ENST00000306014 SEMA3DO95025 777 aa12.73□□□□□ -0.37
DDX54-201ENST00000306014 ACRP10323 421 aa12.73□□□□□ -0.37
DDX54-201ENST00000306014 MPIP34949 423 aa12.73□□□□□ -0.37
DDX54-201ENST00000306014 IDUAP35475 653 aa12.73□□□□□ -0.37
DDX54-201ENST00000306014 SOX3P41225 446 aa12.73□□□□□ -0.37
DDX54-201ENST00000306014 FAM124AQ86V42 546 aa12.73□□□□□ -0.37
DDX54-201ENST00000306014 OR52N2Q8NGI0 321 aa12.73□□□□□ -0.37
DDX54-201ENST00000306014 C17orf62Q9BQA9 187 aa12.73□□□□□ -0.37
DDX54-201ENST00000306014 RBM38Q9H0Z9 239 aaKnown RBP12.73□□□□□ -0.37
DDX54-201ENST00000306014 ANKMY1Q9P2S6 941 aa12.73□□□□□ -0.37
DDX54-201ENST00000306014 ENPP4Q9Y6X5 453 aa12.73□□□□□ -0.37
DDX54-201ENST00000306014 TBC1D3DA0A087WVF3 549 aa12.73□□□□□ -0.37
DDX54-201ENST00000306014 TBC1D3IA0A087WXS9 549 aa12.73□□□□□ -0.37
DDX54-201ENST00000306014 TBC1D3EA0A087X179 549 aa12.73□□□□□ -0.37
DDX54-201ENST00000306014 TBC1D3KA0A087X1G2 549 aa12.73□□□□□ -0.37
DDX54-201ENST00000306014 TBC1D3FA6NER0 549 aaPredicted RBP12.73□□□□□ -0.37
DDX54-201ENST00000306014 TBC1D3LB9A6J9 549 aa12.73□□□□□ -0.37
DDX54-201ENST00000306014 CACNB4O00305 520 aaPredicted RBP12.73□□□□□ -0.37
DDX54-201ENST00000306014 CTDSP2O14595 271 aa12.73□□□□□ -0.37
DDX54-201ENST00000306014 NUAK1O60285 661 aa12.73□□□□□ -0.37
DDX54-201ENST00000306014 CACNG3O60359 315 aa12.73□□□□□ -0.37
DDX54-201ENST00000306014 TSPAN9O75954 239 aa12.73□□□□□ -0.37
DDX54-201ENST00000306014 HMGN1P05114 100 aa12.73□□□□□ -0.37
DDX54-201ENST00000306014 TBC1D3HP0C7X1 549 aa12.73□□□□□ -0.37
DDX54-201ENST00000306014 JUNBP17275 347 aaPredicted RBP12.73□□□□□ -0.37
DDX54-201ENST00000306014 PSMD4P55036 377 aaKnown RBP12.73□□□□□ -0.37
DDX54-201ENST00000306014 RAB8AP61006 207 aa12.73□□□□□ -0.37
DDX54-201ENST00000306014 SLC3A1Q07837 685 aa12.73□□□□□ -0.37
DDX54-201ENST00000306014 GPR68Q15743 365 aa12.73□□□□□ -0.37
DDX54-201ENST00000306014 NDUFA9Q16795 377 aa12.73□□□□□ -0.37
DDX54-201ENST00000306014 TBC1D3GQ6DHY5 549 aa12.73□□□□□ -0.37
DDX54-201ENST00000306014 GTF2IRD2BQ6EKJ0 949 aa12.73□□□□□ -0.37
DDX54-201ENST00000306014 TBC1D3CQ6IPX1 549 aa12.73□□□□□ -0.37
DDX54-201ENST00000306014 PSRC1Q6PGN9 363 aaPredicted RBP12.73□□□□□ -0.37
DDX54-201ENST00000306014 CBLL1Q75N03 491 aa12.73□□□□□ -0.37
DDX54-201ENST00000306014 GTF2IRD2Q86UP8 949 aa12.73□□□□□ -0.37
DDX54-201ENST00000306014 TBC1D3Q8IZP1 549 aaPredicted RBP12.73□□□□□ -0.37
DDX54-201ENST00000306014 TMEM151AQ8N4L1 468 aa12.73□□□□□ -0.37
DDX54-201ENST00000306014 GATAD2BQ8WXI9 593 aa12.73□□□□□ -0.37
DDX54-201ENST00000306014 SORCS1Q8WY21 1168 aa12.73□□□□□ -0.37
DDX54-201ENST00000306014 ZNF486Q96H40 463 aaPredicted RBP12.73□□□□□ -0.37
DDX54-201ENST00000306014 HCSTQ9UBK5 93 aa12.73□□□□□ -0.37
DDX54-201ENST00000306014 EIF3KQ9UBQ5 218 aaKnown RBP12.73□□□□□ -0.37
DDX54-201ENST00000306014 ITM2BQ9Y287 266 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms