RNA–Protein interactions for RNA: ENST00000303758.7

HMGN1P35-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 35, humanhuman

BASIC

Gene HMGN1P35, Length 594 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P35-201ENST00000303758 PAFAH2Q99487 392 aa10.15□□□□□ -0.78
HMGN1P35-201ENST00000303758 LYRM4Q9HD34 91 aa10.15□□□□□ -0.78
HMGN1P35-201ENST00000303758 PRDM7Q9NQW5 492 aa10.15□□□□□ -0.78
HMGN1P35-201ENST00000303758 SH3BGRL2Q9UJC5 107 aa10.15□□□□□ -0.78
HMGN1P35-201ENST00000303758 PCDHGA11Q9Y5H2 935 aa10.15□□□□□ -0.78
HMGN1P35-201ENST00000303758 TNPO3Q9Y5L0 923 aaKnown RBP10.15□□□□□ -0.78
HMGN1P35-201ENST00000303758 CROCCQ5TZA2 2017 aa10.15□□□□□ -0.78
HMGN1P35-201ENST00000303758 ICE1Q9Y2F5 2266 aa10.15□□□□□ -0.78
HMGN1P35-201ENST00000303758 CRYBG3Q68DQ2 2970 aa10.14□□□□□ -0.79
HMGN1P35-201ENST00000303758 A0A087WUV0 522 aaPredicted RBP10.14□□□□□ -0.79
HMGN1P35-201ENST00000303758 WIPF3A6NGB9 483 aa10.14□□□□□ -0.79
HMGN1P35-201ENST00000303758 CTNSO60931 367 aa10.14□□□□□ -0.79
HMGN1P35-201ENST00000303758 SMIM24O75264 130 aa10.14□□□□□ -0.79
HMGN1P35-201ENST00000303758 NEURL1O76050 574 aa10.14□□□□□ -0.79
HMGN1P35-201ENST00000303758 ZFAND5O76080 213 aa10.14□□□□□ -0.79
HMGN1P35-201ENST00000303758 CLDN1O95832 211 aa10.14□□□□□ -0.79
HMGN1P35-201ENST00000303758 ALDOAP04075 364 aaKnown RBP10.14□□□□□ -0.79
HMGN1P35-201ENST00000303758 RBP1P09455 135 aa10.14□□□□□ -0.79
HMGN1P35-201ENST00000303758 MTHFD2P13995 350 aa10.14□□□□□ -0.79
HMGN1P35-201ENST00000303758 COX7A2P14406 83 aa10.14□□□□□ -0.79
HMGN1P35-201ENST00000303758 ZNF24P17028 368 aa10.14□□□□□ -0.79
HMGN1P35-201ENST00000303758 HIST1H1TP22492 207 aaPredicted RBP10.14□□□□□ -0.79
HMGN1P35-201ENST00000303758 ATP5A1P25705 553 aaKnown RBP10.14□□□□□ -0.79
HMGN1P35-201ENST00000303758 CNTFP26441 200 aa10.14□□□□□ -0.79
HMGN1P35-201ENST00000303758 HLCSP50747 726 aa10.14□□□□□ -0.79
HMGN1P35-201ENST00000303758 SSR4P51571 173 aa10.14□□□□□ -0.79
HMGN1P35-201ENST00000303758 GTF2H2Q13888 395 aa10.14□□□□□ -0.79
HMGN1P35-201ENST00000303758 SERTAD2Q14140 314 aa10.14□□□□□ -0.79
HMGN1P35-201ENST00000303758 E2F2Q14209 437 aa10.14□□□□□ -0.79
HMGN1P35-201ENST00000303758 TSNAXIP1Q2TAA8 658 aa10.14□□□□□ -0.79
HMGN1P35-201ENST00000303758 TECRLQ5HYJ1 363 aa10.14□□□□□ -0.79
HMGN1P35-201ENST00000303758 UBAP2Q5T6F2 1119 aaKnown RBP10.14□□□□□ -0.79
HMGN1P35-201ENST00000303758 ZNF468Q5VIY5 522 aaPredicted RBP10.14□□□□□ -0.79
HMGN1P35-201ENST00000303758 KHDRBS2Q5VWX1 349 aaKnown RBP10.14□□□□□ -0.79
HMGN1P35-201ENST00000303758 GTF2H2CQ6P1K8 395 aa10.14□□□□□ -0.79
HMGN1P35-201ENST00000303758 ZNF793Q6ZN11 406 aa10.14□□□□□ -0.79
HMGN1P35-201ENST00000303758 GOLGA7Q7Z5G4 137 aa10.14□□□□□ -0.79
HMGN1P35-201ENST00000303758 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.14□□□□□ -0.79
HMGN1P35-201ENST00000303758 RELL1Q8IUW5 271 aa10.14□□□□□ -0.79
HMGN1P35-201ENST00000303758 CYP4Z2PQ8N1L4 340 aa10.14□□□□□ -0.79
HMGN1P35-201ENST00000303758 ACOT4Q8N9L9 421 aa10.14□□□□□ -0.79
HMGN1P35-201ENST00000303758 APCDD1LQ8NCL9 501 aa10.14□□□□□ -0.79
HMGN1P35-201ENST00000303758 C7orf57Q8NEG2 295 aa10.14□□□□□ -0.79
HMGN1P35-201ENST00000303758 OR14A16Q8NHC5 309 aa10.14□□□□□ -0.79
HMGN1P35-201ENST00000303758 KIF18AQ8NI77 898 aa10.14□□□□□ -0.79
HMGN1P35-201ENST00000303758 UHMK1Q8TAS1 419 aaKnown RBP10.14□□□□□ -0.79
HMGN1P35-201ENST00000303758 SLC44A1Q8WWI5 657 aa10.14□□□□□ -0.79
HMGN1P35-201ENST00000303758 RGMAQ96B86 450 aa10.14□□□□□ -0.79
HMGN1P35-201ENST00000303758 TRIM44Q96DX7 344 aaPredicted RBP10.14□□□□□ -0.79
HMGN1P35-201ENST00000303758 MTERF1Q99551 399 aaKnown RBP10.14□□□□□ -0.79
HMGN1P35-201ENST00000303758 MAPKAP1Q9BPZ7 522 aa10.14□□□□□ -0.79
HMGN1P35-201ENST00000303758 TSPAN10Q9H1Z9 355 aaPredicted RBP10.14□□□□□ -0.79
HMGN1P35-201ENST00000303758 OR51B5Q9H339 312 aa10.14□□□□□ -0.79
HMGN1P35-201ENST00000303758 DMRT3Q9NQL9 472 aa10.14□□□□□ -0.79
HMGN1P35-201ENST00000303758 COPS7AQ9UBW8 275 aa10.14□□□□□ -0.79
HMGN1P35-201ENST00000303758 PHF11Q9UIL8 331 aa10.14□□□□□ -0.79
HMGN1P35-201ENST00000303758 TMCO1Q9UM00 188 aa10.14□□□□□ -0.79
HMGN1P35-201ENST00000303758 ERVK-11Q9UQG0 969 aa10.14□□□□□ -0.79
HMGN1P35-201ENST00000303758 KLF13Q9Y2Y9 288 aaPredicted RBP10.14□□□□□ -0.79
HMGN1P35-201ENST00000303758 DOPEY1Q5JWR5 2465 aa10.13□□□□□ -0.79
HMGN1P35-201ENST00000303758 MYOCOSA0A1B0GUC4 107 aa10.13□□□□□ -0.79
HMGN1P35-201ENST00000303758 EXOC1LA0A1B0GW35 172 aa10.13□□□□□ -0.79
HMGN1P35-201ENST00000303758 HMX2A2RU54 273 aa10.13□□□□□ -0.79
HMGN1P35-201ENST00000303758 ASPDHA6ND91 283 aa10.13□□□□□ -0.79
HMGN1P35-201ENST00000303758 LRRC14BA6NHZ5 514 aa10.13□□□□□ -0.79
HMGN1P35-201ENST00000303758 C17orf105B2RV13 164 aa10.13□□□□□ -0.79
HMGN1P35-201ENST00000303758 NPIPA5E9PKD4 350 aa10.13□□□□□ -0.79
HMGN1P35-201ENST00000303758 KLRC4-KLRK1H3BQV0 150 aa10.13□□□□□ -0.79
HMGN1P35-201ENST00000303758 TGFBR3LH3BV60 316 aa10.13□□□□□ -0.79
HMGN1P35-201ENST00000303758 CCL21O00585 134 aa10.13□□□□□ -0.79
HMGN1P35-201ENST00000303758 CYR61O00622 381 aa10.13□□□□□ -0.79
HMGN1P35-201ENST00000303758 DYRK3O43781 588 aa10.13□□□□□ -0.79
HMGN1P35-201ENST00000303758 NME2P1O60361 137 aa10.13□□□□□ -0.79
HMGN1P35-201ENST00000303758 UGDHO60701 494 aa10.13□□□□□ -0.79
HMGN1P35-201ENST00000303758 ZG16O60844 167 aa10.13□□□□□ -0.79
HMGN1P35-201ENST00000303758 LDB3O75112 727 aa10.13□□□□□ -0.79
HMGN1P35-201ENST00000303758 ITGA10O75578 1167 aa10.13□□□□□ -0.79
HMGN1P35-201ENST00000303758 SIX3O95343 332 aaPredicted RBP10.13□□□□□ -0.79
HMGN1P35-201ENST00000303758 ESRRAP11474 423 aaPredicted RBP10.13□□□□□ -0.79
HMGN1P35-201ENST00000303758 NME2P22392 152 aa10.13□□□□□ -0.79
HMGN1P35-201ENST00000303758 TLX1P31314 330 aaPredicted RBP10.13□□□□□ -0.79
HMGN1P35-201ENST00000303758 BUD31P41223 144 aaPredicted RBP10.13□□□□□ -0.79
HMGN1P35-201ENST00000303758 PIK3CBP42338 1070 aa10.13□□□□□ -0.79
HMGN1P35-201ENST00000303758 CCNG1P51959 295 aa10.13□□□□□ -0.79
HMGN1P35-201ENST00000303758 RPS13P62277 151 aaKnown RBP10.13□□□□□ -0.79
HMGN1P35-201ENST00000303758 ID2Q02363 134 aa10.13□□□□□ -0.79
HMGN1P35-201ENST00000303758 SLAMF1Q13291 335 aa10.13□□□□□ -0.79
HMGN1P35-201ENST00000303758 PCBP2Q15366 365 aaKnown RBP eCLIP10.13□□□□□ -0.79
HMGN1P35-201ENST00000303758 ZRSR2Q15696 482 aaKnown RBP10.13□□□□□ -0.79
HMGN1P35-201ENST00000303758 CPSF6Q16630 551 aaKnown RBP eCLIP10.13□□□□□ -0.79
HMGN1P35-201ENST00000303758 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.13□□□□□ -0.79
HMGN1P35-201ENST00000303758 DEPDC1Q5TB30 811 aa10.13□□□□□ -0.79
HMGN1P35-201ENST00000303758 OR4C11Q6IEV9 310 aa10.13□□□□□ -0.79
HMGN1P35-201ENST00000303758 MTFR2Q6P444 385 aa10.13□□□□□ -0.79
HMGN1P35-201ENST00000303758 HSDL2Q6YN16 418 aa10.13□□□□□ -0.79
HMGN1P35-201ENST00000303758 RNF175Q8N4F7 328 aa10.13□□□□□ -0.79
HMGN1P35-201ENST00000303758 CEP112Q8N8E3 955 aa10.13□□□□□ -0.79
HMGN1P35-201ENST00000303758 PTGR2Q8N8N7 351 aaPredicted RBP10.13□□□□□ -0.79
HMGN1P35-201ENST00000303758 HUS1BQ8NHY5 278 aa10.13□□□□□ -0.79
HMGN1P35-201ENST00000303758 ASB15Q8WXK1 588 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms