RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 CYR61O00622 381 aa23.06■■□□□ 1.28
HOXC9-201ENST00000303450 EFSO43281 561 aa23.06■■□□□ 1.28
HOXC9-201ENST00000303450 PEX11AO75192 247 aa23.06■■□□□ 1.28
HOXC9-201ENST00000303450 GUCY1B2O75343 617 aa23.06■■□□□ 1.28
HOXC9-201ENST00000303450 TLX1P31314 330 aaPredicted RBP23.06■■□□□ 1.28
HOXC9-201ENST00000303450 MDH1P40925 334 aaKnown RBP23.06■■□□□ 1.28
HOXC9-201ENST00000303450 BUD31P41223 144 aaPredicted RBP23.06■■□□□ 1.28
HOXC9-201ENST00000303450 HK2P52789 917 aa23.06■■□□□ 1.28
HOXC9-201ENST00000303450 UCNP55089 124 aa23.06■■□□□ 1.28
HOXC9-201ENST00000303450 RAE1P78406 368 aaKnown RBP23.06■■□□□ 1.28
HOXC9-201ENST00000303450 WDR75Q8IWA0 830 aaKnown RBP23.06■■□□□ 1.28
HOXC9-201ENST00000303450 VN1R1Q9GZP7 353 aa23.06■■□□□ 1.28
HOXC9-201ENST00000303450 SEMA3GQ9NS98 782 aa23.06■■□□□ 1.28
HOXC9-201ENST00000303450 POLR3HQ9Y535 204 aaPredicted RBP23.06■■□□□ 1.28
HOXC9-201ENST00000303450 OR2W5A6NFC9 320 aa23.05■■□□□ 1.28
HOXC9-201ENST00000303450 TRPC5OSA6NMA1 111 aa23.05■■□□□ 1.28
HOXC9-201ENST00000303450 CLDN4O14493 209 aa23.05■■□□□ 1.28
HOXC9-201ENST00000303450 PROM1O43490 865 aa23.05■■□□□ 1.28
HOXC9-201ENST00000303450 ANXA4P09525 319 aaPredicted RBP23.05■■□□□ 1.28
HOXC9-201ENST00000303450 OTX2P32243 289 aa23.05■■□□□ 1.28
HOXC9-201ENST00000303450 RPL38P63173 70 aaKnown RBP23.05■■□□□ 1.28
HOXC9-201ENST00000303450 TNFRSF17Q02223 184 aa23.05■■□□□ 1.28
HOXC9-201ENST00000303450 IL10RAQ13651 578 aa23.05■■□□□ 1.28
HOXC9-201ENST00000303450 KIAA0040Q15053 153 aa23.05■■□□□ 1.28
HOXC9-201ENST00000303450 NOXRED1Q6NXP6 359 aa23.05■■□□□ 1.28
HOXC9-201ENST00000303450 MED25Q71SY5 747 aa23.05■■□□□ 1.28
HOXC9-201ENST00000303450 ZNF595Q8IYB9 648 aa23.05■■□□□ 1.28
HOXC9-201ENST00000303450 WDR41Q9HAD4 459 aa23.05■■□□□ 1.28
HOXC9-201ENST00000303450 MEAF6Q9HAF1 191 aa23.05■■□□□ 1.28
HOXC9-201ENST00000303450 GIMAP2Q9UG22 337 aa23.05■■□□□ 1.28
HOXC9-201ENST00000303450 TMED5Q9Y3A6 229 aa23.05■■□□□ 1.28
HOXC9-201ENST00000303450 NUP210LQ5VU65 1888 aa23.05■■□□□ 1.28
HOXC9-201ENST00000303450 PRMT3O60678 531 aa23.04■■□□□ 1.28
HOXC9-201ENST00000303450 RECKO95980 971 aa23.04■■□□□ 1.28
HOXC9-201ENST00000303450 IGHEP01854 428 aa23.04■■□□□ 1.28
HOXC9-201ENST00000303450 TRA2BP62995 288 aaKnown RBP23.04■■□□□ 1.28
HOXC9-201ENST00000303450 RFTN2Q52LD8 501 aaPredicted RBP23.04■■□□□ 1.28
HOXC9-201ENST00000303450 RAB43Q86YS6 212 aa23.04■■□□□ 1.28
HOXC9-201ENST00000303450 A0A1W2PR48 441 aa23.03■■□□□ 1.28
HOXC9-201ENST00000303450 BLACEA4D250 179 aa23.03■■□□□ 1.28
HOXC9-201ENST00000303450 NKX2-8O15522 239 aa23.03■■□□□ 1.28
HOXC9-201ENST00000303450 VPS4BO75351 444 aa23.03■■□□□ 1.28
HOXC9-201ENST00000303450 MMP11P24347 488 aa23.03■■□□□ 1.28
HOXC9-201ENST00000303450 HNRNPFP52597 415 aaKnown RBP23.03■■□□□ 1.28
HOXC9-201ENST00000303450 TMPRSS3P57727 454 aa23.03■■□□□ 1.28
HOXC9-201ENST00000303450 BTG2P78543 158 aa23.03■■□□□ 1.28
HOXC9-201ENST00000303450 UGT8Q16880 541 aa23.03■■□□□ 1.28
HOXC9-201ENST00000303450 C6orf136Q5SQH8 315 aa23.03■■□□□ 1.28
HOXC9-201ENST00000303450 C18orf63Q68DL7 685 aa23.03■■□□□ 1.28
HOXC9-201ENST00000303450 FAAH2Q6GMR7 532 aa23.03■■□□□ 1.28
HOXC9-201ENST00000303450 QSOX2Q6ZRP7 698 aa23.03■■□□□ 1.28
HOXC9-201ENST00000303450 TMEM52Q8NDY8 209 aa23.03■■□□□ 1.28
HOXC9-201ENST00000303450 METTL21AQ8WXB1 218 aa23.03■■□□□ 1.28
HOXC9-201ENST00000303450 PTCHD1Q96NR3 888 aa23.03■■□□□ 1.28
HOXC9-201ENST00000303450 RPF2Q9H7B2 306 aaKnown RBP23.03■■□□□ 1.28
HOXC9-201ENST00000303450 AKTIPQ9H8T0 292 aa23.03■■□□□ 1.28
HOXC9-201ENST00000303450 PRTFDC1Q9NRG1 225 aa23.03■■□□□ 1.28
HOXC9-201ENST00000303450 TEX10Q9NXF1 929 aaPredicted RBP23.03■■□□□ 1.28
HOXC9-201ENST00000303450 MMACHCQ9Y4U1 282 aa23.03■■□□□ 1.28
HOXC9-201ENST00000303450 CDC14CA4D256 554 aa23.03■■□□□ 1.28
HOXC9-201ENST00000303450 ALOX12BO75342 701 aa23.03■■□□□ 1.28
HOXC9-201ENST00000303450 AIFM1O95831 613 aa23.03■■□□□ 1.28
HOXC9-201ENST00000303450 CYC1P08574 325 aa23.03■■□□□ 1.28
HOXC9-201ENST00000303450 NR2F6P10588 404 aa23.03■■□□□ 1.28
HOXC9-201ENST00000303450 PRKAR1AP10644 381 aa23.03■■□□□ 1.28
HOXC9-201ENST00000303450 HSD17B7P56937 341 aa23.03■■□□□ 1.28
HOXC9-201ENST00000303450 TAS2R50P59544 299 aa23.03■■□□□ 1.28
HOXC9-201ENST00000303450 RHAGQ02094 409 aa23.03■■□□□ 1.28
HOXC9-201ENST00000303450 ZNF763Q0D2J5 394 aa23.03■■□□□ 1.28
HOXC9-201ENST00000303450 SLC13A2Q13183 592 aa23.03■■□□□ 1.28
HOXC9-201ENST00000303450 NSDHLQ15738 373 aa23.03■■□□□ 1.28
HOXC9-201ENST00000303450 CRTC2Q53ET0 693 aaPredicted RBP23.03■■□□□ 1.28
HOXC9-201ENST00000303450 NDUFAF5Q5TEU4 345 aa23.03■■□□□ 1.28
HOXC9-201ENST00000303450 FNDC5Q8NAU1 212 aa23.03■■□□□ 1.28
HOXC9-201ENST00000303450 TM4SF18Q96CE8 201 aa23.03■■□□□ 1.28
HOXC9-201ENST00000303450 CCDC134Q9H6E4 229 aa23.03■■□□□ 1.28
HOXC9-201ENST00000303450 PRDM9Q9NQV7 894 aa23.03■■□□□ 1.28
HOXC9-201ENST00000303450 USH1CQ9Y6N9 552 aa23.03■■□□□ 1.28
HOXC9-201ENST00000303450 EDF1O60869 148 aaKnown RBP23.02■■□□□ 1.28
HOXC9-201ENST00000303450 C8orf89P0DMQ9 161 aa23.02■■□□□ 1.28
HOXC9-201ENST00000303450 MAOAP21397 527 aa23.02■■□□□ 1.28
HOXC9-201ENST00000303450 MAPK1P28482 360 aa23.02■■□□□ 1.28
HOXC9-201ENST00000303450 GSTM5P46439 218 aa23.02■■□□□ 1.28
HOXC9-201ENST00000303450 VWA5B1Q5TIE3 1220 aa23.02■■□□□ 1.28
HOXC9-201ENST00000303450 PLPP5Q8NEB5 264 aa23.02■■□□□ 1.28
HOXC9-201ENST00000303450 CDC26Q8NHZ8 85 aa23.02■■□□□ 1.28
HOXC9-201ENST00000303450 C16orf78Q8WTQ4 265 aa23.02■■□□□ 1.28
HOXC9-201ENST00000303450 NACC2Q96BF6 587 aa23.02■■□□□ 1.28
HOXC9-201ENST00000303450 FAIM2Q9BWQ8 316 aa23.02■■□□□ 1.28
HOXC9-201ENST00000303450 CPNE5Q9HCH3 593 aa23.02■■□□□ 1.28
HOXC9-201ENST00000303450 DLGAP4Q9Y2H0 992 aa23.02■■□□□ 1.28
HOXC9-201ENST00000303450 MAP1BP46821 2468 aaKnown RBP23.02■■□□□ 1.28
HOXC9-201ENST00000303450 LAMA5O15230 3695 aa23.02■■□□□ 1.28
HOXC9-201ENST00000303450 GLOD5A6NK44 160 aa23.01■■□□□ 1.27
HOXC9-201ENST00000303450 SRRM3A6NNA2 597 aaPredicted RBP23.01■■□□□ 1.27
HOXC9-201ENST00000303450 SDHDO14521 159 aa23.01■■□□□ 1.27
HOXC9-201ENST00000303450 CTNSO60931 367 aa23.01■■□□□ 1.27
HOXC9-201ENST00000303450 PRKRAO75569 313 aaKnown RBP23.01■■□□□ 1.27
HOXC9-201ENST00000303450 EFNA3P52797 238 aa23.01■■□□□ 1.27
HOXC9-201ENST00000303450 MAD2L1Q13257 205 aaPredicted RBP23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms