RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 LRRC42Q9Y546 428 aa10.02□□□□□ -0.81
CLIP1-201ENST00000302528 HMX3A6NHT5 357 aa10.02□□□□□ -0.81
CLIP1-201ENST00000302528 DNM1LO00429 736 aa10.02□□□□□ -0.81
CLIP1-201ENST00000302528 PFKLP17858 780 aa10.02□□□□□ -0.81
CLIP1-201ENST00000302528 CD53P19397 219 aa10.02□□□□□ -0.81
CLIP1-201ENST00000302528 AGTR1P30556 359 aa10.02□□□□□ -0.81
CLIP1-201ENST00000302528 DPY19L3Q6ZPD9 716 aa10.02□□□□□ -0.81
CLIP1-201ENST00000302528 TMPRSS12Q86WS5 348 aa10.02□□□□□ -0.81
CLIP1-201ENST00000302528 KIF18BQ86Y91 864 aa10.02□□□□□ -0.81
CLIP1-201ENST00000302528 ESX1Q8N693 406 aa10.02□□□□□ -0.81
CLIP1-201ENST00000302528 PSD4Q8NDX1 1056 aa10.02□□□□□ -0.81
CLIP1-201ENST00000302528 OR10Q1Q8NGQ4 319 aa10.02□□□□□ -0.81
CLIP1-201ENST00000302528 OR13C3Q8NGS6 347 aa10.02□□□□□ -0.81
CLIP1-201ENST00000302528 SPRYD4Q8WW59 207 aaPredicted RBP10.02□□□□□ -0.81
CLIP1-201ENST00000302528 HNRNPABQ99729 332 aaKnown RBP10.02□□□□□ -0.81
CLIP1-201ENST00000302528 FBXW11Q9UKB1 542 aa10.02□□□□□ -0.81
CLIP1-201ENST00000302528 MGAT4BQ9UQ53 548 aa10.02□□□□□ -0.81
CLIP1-201ENST00000302528 HCRTR2O43614 444 aa10.01□□□□□ -0.81
CLIP1-201ENST00000302528 ZNF254O75437 659 aa10.01□□□□□ -0.81
CLIP1-201ENST00000302528 ZBTB48P10074 688 aaPredicted RBP10.01□□□□□ -0.81
CLIP1-201ENST00000302528 CDK2P24941 298 aa10.01□□□□□ -0.81
CLIP1-201ENST00000302528 TRAM1Q15629 374 aa10.01□□□□□ -0.81
CLIP1-201ENST00000302528 CFAP77Q6ZQR2 320 aa10.01□□□□□ -0.81
CLIP1-201ENST00000302528 MON1BQ7L1V2 547 aa10.01□□□□□ -0.81
CLIP1-201ENST00000302528 ANKK1Q8NFD2 765 aa10.01□□□□□ -0.81
CLIP1-201ENST00000302528 ZNF675Q8TD23 568 aa10.01□□□□□ -0.81
CLIP1-201ENST00000302528 ZBTB26Q9HCK0 441 aa10.01□□□□□ -0.81
CLIP1-201ENST00000302528 RLIMQ9NVW2 624 aa10.01□□□□□ -0.81
CLIP1-201ENST00000302528 PCDHGA2Q9Y5H1 932 aa10.01□□□□□ -0.81
CLIP1-201ENST00000302528 GGT3PA6NGU5 568 aa10.01□□□□□ -0.81
CLIP1-201ENST00000302528 OR51F1A6NGY5 319 aa10.01□□□□□ -0.81
CLIP1-201ENST00000302528 C1orf196B1AJZ1 125 aa10.01□□□□□ -0.81
CLIP1-201ENST00000302528 FAM227AF5H4B4 570 aa10.01□□□□□ -0.81
CLIP1-201ENST00000302528 SERPINA7P05543 415 aa10.01□□□□□ -0.81
CLIP1-201ENST00000302528 CHRM1P11229 460 aaPredicted RBP10.01□□□□□ -0.81
CLIP1-201ENST00000302528 ATP1B2P14415 290 aaPredicted RBP10.01□□□□□ -0.81
CLIP1-201ENST00000302528 PRKAR1BP31321 381 aa10.01□□□□□ -0.81
CLIP1-201ENST00000302528 RIDAP52758 137 aaKnown RBP10.01□□□□□ -0.81
CLIP1-201ENST00000302528 POU6F2P78424 691 aaPredicted RBP10.01□□□□□ -0.81
CLIP1-201ENST00000302528 NKX6-1P78426 367 aaPredicted RBP10.01□□□□□ -0.81
CLIP1-201ENST00000302528 EIF2B1Q14232 305 aaKnown RBP10.01□□□□□ -0.81
CLIP1-201ENST00000302528 ZNF674Q2M3X9 581 aa10.01□□□□□ -0.81
CLIP1-201ENST00000302528 FLYWCH1Q4VC44 716 aa10.01□□□□□ -0.81
CLIP1-201ENST00000302528 DUS1LQ6P1R4 473 aaKnown RBP10.01□□□□□ -0.81
CLIP1-201ENST00000302528 KDELC1Q6UW63 502 aa10.01□□□□□ -0.81
CLIP1-201ENST00000302528 HACD2Q6Y1H2 254 aa10.01□□□□□ -0.81
CLIP1-201ENST00000302528 IL17RCQ8NAC3 791 aa10.01□□□□□ -0.81
CLIP1-201ENST00000302528 MOAP1Q96BY2 351 aa10.01□□□□□ -0.81
CLIP1-201ENST00000302528 TMEM45AQ9NWC5 275 aa10.01□□□□□ -0.81
CLIP1-201ENST00000302528 SRRDQ9UH36 339 aa10.01□□□□□ -0.81
CLIP1-201ENST00000302528 ZFR2Q9UPR6 939 aaKnown RBP10.01□□□□□ -0.81
CLIP1-201ENST00000302528 FAM221BA6H8Z2 402 aa10.01□□□□□ -0.81
CLIP1-201ENST00000302528 FTCDNL1E5RQL4 147 aa10.01□□□□□ -0.81
CLIP1-201ENST00000302528 VEGFDO43915 354 aa10.01□□□□□ -0.81
CLIP1-201ENST00000302528 POP7O75817 140 aaKnown RBP10.01□□□□□ -0.81
CLIP1-201ENST00000302528 OAS1P00973 400 aaKnown RBP10.01□□□□□ -0.81
CLIP1-201ENST00000302528 ALPIP09923 528 aa10.01□□□□□ -0.81
CLIP1-201ENST00000302528 H2AFB2P0C5Z0 115 aa10.01□□□□□ -0.81
CLIP1-201ENST00000302528 ID2Q02363 134 aa10.01□□□□□ -0.81
CLIP1-201ENST00000302528 KIAA1614Q5VZ46 1190 aa10.01□□□□□ -0.81
CLIP1-201ENST00000302528 TMEM198Q66K66 360 aa10.01□□□□□ -0.81
CLIP1-201ENST00000302528 MBLAC2Q68D91 279 aa10.01□□□□□ -0.81
CLIP1-201ENST00000302528 LRFN4Q6PJG9 635 aa10.01□□□□□ -0.81
CLIP1-201ENST00000302528 TMEM151BQ8IW70 566 aa10.01□□□□□ -0.81
CLIP1-201ENST00000302528 GATSQ8NAP1 163 aa10.01□□□□□ -0.81
CLIP1-201ENST00000302528 NEIL3Q8TAT5 605 aa10.01□□□□□ -0.81
CLIP1-201ENST00000302528 FAM46BQ96A09 425 aa10.01□□□□□ -0.81
CLIP1-201ENST00000302528 SGCZQ96LD1 299 aa10.01□□□□□ -0.81
CLIP1-201ENST00000302528 SLC29A3Q9BZD2 475 aa10.01□□□□□ -0.81
CLIP1-201ENST00000302528 BIN3Q9NQY0 253 aa10.01□□□□□ -0.81
CLIP1-201ENST00000302528 LGALS13Q9UHV8 139 aa10.01□□□□□ -0.81
CLIP1-201ENST00000302528 CYP8B1Q9UNU6 501 aa10.01□□□□□ -0.81
CLIP1-201ENST00000302528 STXBP5LQ9Y2K9 1186 aa10.01□□□□□ -0.81
CLIP1-201ENST00000302528 H3BSA7 217 aa10.01□□□□□ -0.81
CLIP1-201ENST00000302528 KLRC4O43908 158 aa10.01□□□□□ -0.81
CLIP1-201ENST00000302528 IFNA17P01571 189 aa10.01□□□□□ -0.81
CLIP1-201ENST00000302528 SLC36A3Q495N2 470 aa10.01□□□□□ -0.81
CLIP1-201ENST00000302528 EOGTQ5NDL2 527 aa10.01□□□□□ -0.81
CLIP1-201ENST00000302528 MEDAGQ5VYS4 303 aa10.01□□□□□ -0.81
CLIP1-201ENST00000302528 C3P1Q6ZMU1 363 aa10.01□□□□□ -0.81
CLIP1-201ENST00000302528 TMEM139Q8IV31 216 aa10.01□□□□□ -0.81
CLIP1-201ENST00000302528 C12orf45Q8N5I9 185 aaPredicted RBP10.01□□□□□ -0.81
CLIP1-201ENST00000302528 TCTEX1D2Q8WW35 142 aa10.01□□□□□ -0.81
CLIP1-201ENST00000302528 TFGQ92734 400 aaPredicted RBP10.01□□□□□ -0.81
CLIP1-201ENST00000302528 ACDQ96AP0 544 aa10.01□□□□□ -0.81
CLIP1-201ENST00000302528 EBF4Q9BQW3 602 aa10.01□□□□□ -0.81
CLIP1-201ENST00000302528 TP63Q9H3D4 680 aaPredicted RBP10.01□□□□□ -0.81
CLIP1-201ENST00000302528 HCN4Q9Y3Q4 1203 aa10.01□□□□□ -0.81
CLIP1-201ENST00000302528 SIX3O95343 332 aaPredicted RBP10.01□□□□□ -0.81
CLIP1-201ENST00000302528 C6orf47O95873 294 aa10.01□□□□□ -0.81
CLIP1-201ENST00000302528 ADAP00813 363 aa10.01□□□□□ -0.81
CLIP1-201ENST00000302528 TYRP1P17643 537 aa10.01□□□□□ -0.81
CLIP1-201ENST00000302528 SCNN1AP37088 669 aa10.01□□□□□ -0.81
CLIP1-201ENST00000302528 CHRNA4P43681 627 aa10.01□□□□□ -0.81
CLIP1-201ENST00000302528 MEP1AQ16819 746 aa10.01□□□□□ -0.81
CLIP1-201ENST00000302528 TMEM110Q86TL2 294 aa10.01□□□□□ -0.81
CLIP1-201ENST00000302528 ZSWIM9Q86XI8 627 aa10.01□□□□□ -0.81
CLIP1-201ENST00000302528 NPAS3Q8IXF0 933 aa10.01□□□□□ -0.81
CLIP1-201ENST00000302528 UBXN10Q96LJ8 280 aa10.01□□□□□ -0.81
CLIP1-201ENST00000302528 SLC2A4RGQ9NR83 387 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms