RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 DHDHQ9UQ10 334 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 RAD51DO75771 328 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 RBBP9O75884 186 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 IFNA5P01569 189 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 KCNE1P15382 129 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 DGKQP52824 942 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 TLE3Q04726 772 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 CRHR2Q13324 411 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 GK2Q14410 553 aaPredicted RBP7.36□□□□□ -1.23
SF3B3-201ENST00000302516 LASP1Q14847 261 aaKnown RBP7.36□□□□□ -1.23
SF3B3-201ENST00000302516 GRIK5Q16478 980 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 PLPP4Q5VZY2 271 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 C3orf33Q6P1S2 294 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 ARSKQ6UWY0 536 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 TMIGD1Q6UXZ0 262 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 LYSMD3Q7Z3D4 306 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.36□□□□□ -1.23
SF3B3-201ENST00000302516 L3HYPDHQ96EM0 354 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 PELOQ9BRX2 385 aaKnown RBP7.36□□□□□ -1.23
SF3B3-201ENST00000302516 POLMQ9NP87 494 aaPredicted RBP7.36□□□□□ -1.23
SF3B3-201ENST00000302516 PRODH2Q9UF12 536 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 SLC22A14Q9Y267 594 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 RIPK3Q9Y572 518 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 SAP18O00422 153 aaKnown RBP7.36□□□□□ -1.23
SF3B3-201ENST00000302516 RFC2P35250 354 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 KCNC1P48547 511 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 NUDT6P53370 316 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 KEAP1Q14145 624 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 MS4A15Q8N5U1 240 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 C12orf42Q96LP6 360 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 RNF121Q9H920 327 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 AMBNQ9NP70 447 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 PTTG3PQ9NZH4 202 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 SLC17A6Q9P2U8 582 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 PAHP00439 452 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 CSN2P05814 226 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 FHP07954 510 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 ARL6IP1Q15041 203 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 NPY5RQ15761 445 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 OR9A1PQ8NGU1 263 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 OR5AK3PQ8NH89 298 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 LGALS12Q96DT0 336 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 OR5B12Q96R08 314 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 ZNF559Q9BR84 538 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 NUBP2Q9Y5Y2 271 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 COL1A1P02452 1464 aaPredicted RBP7.36□□□□□ -1.23
SF3B3-201ENST00000302516 UPK1BO75841 260 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 SNAP29O95721 258 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 C6orf47O95873 294 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 GSRP00390 522 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 COMMD7Q86VX2 200 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 BEST3Q8N1M1 668 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 FTMTQ8N4E7 242 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 ADAMTS18Q8TE60 1221 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 CHPT1Q8WUD6 406 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 MUS81Q96NY9 551 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 TMEM246Q9BRR3 403 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 TTYH2Q9BSA4 534 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 EVA1AQ9H8M9 152 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 MAFFQ9ULX9 164 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 C12orf71A8MTZ7 269 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 PCDH17O14917 1159 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 MPC1LP0DKB6 136 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 TAS2R31P59538 309 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 HSD11B2P80365 405 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 LRRC32Q14392 662 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 KCTD9Q7L273 389 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 FAM124AQ86V42 546 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 NLGN2Q8NFZ4 835 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 TMEM234Q8WY98 164 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 ARL11Q969Q4 196 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 SYT4Q9H2B2 425 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 GPRC5BQ9NZH0 403 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 NR2E3Q9Y5X4 410 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 PLCH1Q4KWH8 1693 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 A0A0J9YVX5 310 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 C9J4A7 227 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 SIX3O95343 332 aaPredicted RBP7.35□□□□□ -1.23
SF3B3-201ENST00000302516 CD1DP15813 335 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 MADCAM1Q13477 382 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 SLC36A3Q495N2 470 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 SPANXN4Q5MJ08 99 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 MFSD8Q8NHS3 518 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 SLC35F5Q8WV83 523 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 ENPP5Q9UJA9 477 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 ENPP3O14638 875 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 GMFGO60234 142 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 FKTNO75072 461 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 RPP14O95059 124 aaKnown RBP7.35□□□□□ -1.23
SF3B3-201ENST00000302516 HOXB9P17482 250 aaPredicted RBP7.35□□□□□ -1.23
SF3B3-201ENST00000302516 TIA1P31483 386 aaKnown RBP eCLIP7.35□□□□□ -1.231e-9■■□□□ 12
SF3B3-201ENST00000302516 NFATC3Q12968 1075 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 TMEM35AQ53FP2 167 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 TECRLQ5HYJ1 363 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 MANEALQ5VSG8 457 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 FBXL22Q6P050 247 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 TMEM205Q6UW68 189 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 VITQ6UXI7 678 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 HFE2Q6ZVN8 426 aa7.35□□□□□ -1.23
SF3B3-201ENST00000302516 C2orf73Q8N5S3 287 aaPredicted RBP7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms