RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 ASB16Q96NS5 453 aa9.66□□□□□ -0.86
FOXN4-201ENST00000299162 ZCCHC2Q9C0B9 1178 aaKnown RBP9.66□□□□□ -0.86
FOXN4-201ENST00000299162 ZBTB20Q9HC78 741 aaPredicted RBP9.66□□□□□ -0.86
FOXN4-201ENST00000299162 C3orf18Q9UK00 162 aa9.66□□□□□ -0.86
FOXN4-201ENST00000299162 MAFFQ9ULX9 164 aa9.66□□□□□ -0.86
FOXN4-201ENST00000299162 TRBV5-3A0A0A0MS03 114 aa9.65□□□□□ -0.86
FOXN4-201ENST00000299162 FAM220BPB1ANY3 271 aa9.65□□□□□ -0.86
FOXN4-201ENST00000299162 FAM227AF5H4B4 570 aa9.65□□□□□ -0.86
FOXN4-201ENST00000299162 M0QX08 132 aa9.65□□□□□ -0.86
FOXN4-201ENST00000299162 FOSL1P15407 271 aa9.65□□□□□ -0.86
FOXN4-201ENST00000299162 CD40LGP29965 261 aa9.65□□□□□ -0.86
FOXN4-201ENST00000299162 TIA1P31483 386 aaKnown RBP eCLIP9.65□□□□□ -0.86
FOXN4-201ENST00000299162 PNLIPRP1P54315 467 aa9.65□□□□□ -0.86
FOXN4-201ENST00000299162 CDH12P55289 794 aa9.65□□□□□ -0.86
FOXN4-201ENST00000299162 GBX1Q14549 363 aa9.65□□□□□ -0.86
FOXN4-201ENST00000299162 TAB1Q15750 504 aa9.65□□□□□ -0.86
FOXN4-201ENST00000299162 LRIT3Q3SXY7 679 aa9.65□□□□□ -0.86
FOXN4-201ENST00000299162 SPDYE7PQ495Y7 208 aa9.65□□□□□ -0.86
FOXN4-201ENST00000299162 PRAMEF14Q5SWL7 426 aa9.65□□□□□ -0.86
FOXN4-201ENST00000299162 C6orf132Q5T0Z8 1188 aa9.65□□□□□ -0.86
FOXN4-201ENST00000299162 AGAP7PQ5VUJ5 663 aa9.65□□□□□ -0.86
FOXN4-201ENST00000299162 PRAMEF13Q5VWM6 474 aa9.65□□□□□ -0.86
FOXN4-201ENST00000299162 AHSA2Q719I0 299 aa9.65□□□□□ -0.86
FOXN4-201ENST00000299162 DCP2Q8IU60 420 aaKnown RBP9.65□□□□□ -0.86
FOXN4-201ENST00000299162 NLGN4XQ8N0W4 816 aa9.65□□□□□ -0.86
FOXN4-201ENST00000299162 PROX1Q92786 737 aa9.65□□□□□ -0.86
FOXN4-201ENST00000299162 DOK1Q99704 481 aa9.65□□□□□ -0.86
FOXN4-201ENST00000299162 DHRS9Q9BPW9 319 aa9.65□□□□□ -0.86
FOXN4-201ENST00000299162 PLA2G2FQ9BZM2 168 aa9.65□□□□□ -0.86
FOXN4-201ENST00000299162 REEP1Q9H902 201 aa9.65□□□□□ -0.86
FOXN4-201ENST00000299162 GMPPBQ9Y5P6 360 aa9.65□□□□□ -0.86
FOXN4-201ENST00000299162 DNMT3AQ9Y6K1 912 aaPredicted RBP9.65□□□□□ -0.86
FOXN4-201ENST00000299162 EDDM13A0A1B0GTR0 161 aa9.65□□□□□ -0.86
FOXN4-201ENST00000299162 ZNF99A8MXY4 864 aaPredicted RBP9.65□□□□□ -0.86
FOXN4-201ENST00000299162 AP3D1O14617 1153 aa9.65□□□□□ -0.86
FOXN4-201ENST00000299162 SUV39H1O43463 412 aa9.65□□□□□ -0.86
FOXN4-201ENST00000299162 OR1F1O43749 312 aa9.65□□□□□ -0.86
FOXN4-201ENST00000299162 TSC22D2O75157 780 aa9.65□□□□□ -0.86
FOXN4-201ENST00000299162 KAT7O95251 611 aa9.65□□□□□ -0.86
FOXN4-201ENST00000299162 CCNDBP1O95273 360 aa9.65□□□□□ -0.86
FOXN4-201ENST00000299162 ANGPTL1O95841 491 aa9.65□□□□□ -0.86
FOXN4-201ENST00000299162 HOXB3P14651 431 aaPredicted RBP9.65□□□□□ -0.86
FOXN4-201ENST00000299162 PTNP21246 168 aa9.65□□□□□ -0.86
FOXN4-201ENST00000299162 IDSP22304 550 aa9.65□□□□□ -0.86
FOXN4-201ENST00000299162 TGM1P22735 817 aa9.65□□□□□ -0.86
FOXN4-201ENST00000299162 GP2P55259 537 aaKnown RBP9.65□□□□□ -0.86
FOXN4-201ENST00000299162 CHRNEQ04844 493 aa9.65□□□□□ -0.86
FOXN4-201ENST00000299162 UBE3AQ05086 875 aa9.65□□□□□ -0.86
FOXN4-201ENST00000299162 DPY19L1Q2PZI1 675 aa9.65□□□□□ -0.86
FOXN4-201ENST00000299162 TTC23Q5W5X9 447 aa9.65□□□□□ -0.86
FOXN4-201ENST00000299162 STEAP3Q658P3 488 aa9.65□□□□□ -0.86
FOXN4-201ENST00000299162 VITQ6UXI7 678 aa9.65□□□□□ -0.86
FOXN4-201ENST00000299162 TMIGD1Q6UXZ0 262 aa9.65□□□□□ -0.86
FOXN4-201ENST00000299162 SLC51BQ86UW2 128 aa9.65□□□□□ -0.86
FOXN4-201ENST00000299162 OR5K1Q8NHB7 308 aa9.65□□□□□ -0.86
FOXN4-201ENST00000299162 GTPBP3Q969Y2 492 aaKnown RBP9.65□□□□□ -0.86
FOXN4-201ENST00000299162 TESCQ96BS2 214 aa9.65□□□□□ -0.86
FOXN4-201ENST00000299162 C12orf66Q96MD2 445 aa9.65□□□□□ -0.86
FOXN4-201ENST00000299162 COQ10AQ96MF6 247 aa9.65□□□□□ -0.86
FOXN4-201ENST00000299162 TMEM246Q9BRR3 403 aa9.65□□□□□ -0.86
FOXN4-201ENST00000299162 HOXD1Q9GZZ0 328 aa9.65□□□□□ -0.86
FOXN4-201ENST00000299162 RNF167Q9H6Y7 350 aa9.65□□□□□ -0.86
FOXN4-201ENST00000299162 KRT84Q9NSB2 600 aa9.65□□□□□ -0.86
FOXN4-201ENST00000299162 SAMD4AQ9UPU9 718 aaKnown RBP9.65□□□□□ -0.86
FOXN4-201ENST00000299162 SPTBP11277 2137 aa9.65□□□□□ -0.87
FOXN4-201ENST00000299162 SCN2BO60939 215 aa9.64□□□□□ -0.87
FOXN4-201ENST00000299162 LCKP06239 509 aa9.64□□□□□ -0.87
FOXN4-201ENST00000299162 C1GALT1C1LP0DN25 315 aa9.64□□□□□ -0.87
FOXN4-201ENST00000299162 GJA4P35212 333 aa9.64□□□□□ -0.87
FOXN4-201ENST00000299162 DAPP51397 102 aa9.64□□□□□ -0.87
FOXN4-201ENST00000299162 EMX1Q04741 257 aaPredicted RBP9.64□□□□□ -0.87
FOXN4-201ENST00000299162 ELP6Q0PNE2 266 aa9.64□□□□□ -0.87
FOXN4-201ENST00000299162 NPTX1Q15818 432 aa9.64□□□□□ -0.87
FOXN4-201ENST00000299162 SLC5A12Q1EHB4 618 aa9.64□□□□□ -0.87
FOXN4-201ENST00000299162 GGTA1PQ4G0N0 100 aa9.64□□□□□ -0.87
FOXN4-201ENST00000299162 CPZQ66K79 652 aa9.64□□□□□ -0.87
FOXN4-201ENST00000299162 CCBE1Q6UXH8 406 aaPredicted RBP9.64□□□□□ -0.87
FOXN4-201ENST00000299162 SLC16A12Q6ZSM3 486 aa9.64□□□□□ -0.87
FOXN4-201ENST00000299162 DGLUCYQ7Z3D6 616 aa9.64□□□□□ -0.87
FOXN4-201ENST00000299162 CADM2Q8N3J6 435 aa9.64□□□□□ -0.87
FOXN4-201ENST00000299162 AADATQ8N5Z0 425 aa9.64□□□□□ -0.87
FOXN4-201ENST00000299162 FRMD1Q8N878 549 aa9.64□□□□□ -0.87
FOXN4-201ENST00000299162 VANGL1Q8TAA9 524 aaPredicted RBP9.64□□□□□ -0.87
FOXN4-201ENST00000299162 PPP1R16AQ96I34 528 aa9.64□□□□□ -0.87
FOXN4-201ENST00000299162 PBX4Q9BYU1 374 aa9.64□□□□□ -0.87
FOXN4-201ENST00000299162 POLMQ9NP87 494 aaPredicted RBP9.64□□□□□ -0.87
FOXN4-201ENST00000299162 PRSS16Q9NQE7 514 aa9.64□□□□□ -0.87
FOXN4-201ENST00000299162 SPATA6Q9NWH7 488 aaPredicted RBP9.64□□□□□ -0.87
FOXN4-201ENST00000299162 SIRT5Q9NXA8 310 aa9.64□□□□□ -0.87
FOXN4-201ENST00000299162 THUMPD1Q9NXG2 353 aaKnown RBP9.64□□□□□ -0.87
FOXN4-201ENST00000299162 PAQR5Q9NXK6 330 aaPredicted RBP9.64□□□□□ -0.87
FOXN4-201ENST00000299162 PCDHB11Q9Y5F2 797 aa9.64□□□□□ -0.87
FOXN4-201ENST00000299162 SNTNA6NMZ2 147 aa9.64□□□□□ -0.87
FOXN4-201ENST00000299162 SLC16A5O15375 505 aa9.64□□□□□ -0.87
FOXN4-201ENST00000299162 ERAL1O75616 437 aaKnown RBP9.64□□□□□ -0.87
FOXN4-201ENST00000299162 FGF19O95750 216 aa9.64□□□□□ -0.87
FOXN4-201ENST00000299162 HTR1AP08908 422 aa9.64□□□□□ -0.87
FOXN4-201ENST00000299162 CHRM5P08912 532 aaPredicted RBP9.64□□□□□ -0.87
FOXN4-201ENST00000299162 CCDC159P0C7I6 412 aa9.64□□□□□ -0.87
FOXN4-201ENST00000299162 C8orf89P0DMQ9 161 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms