RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 CKAP5Q14008 2032 aa23.26■■□□□ 1.31
SPTSSA-201ENST00000298130 CBLP22681 906 aa23.26■■□□□ 1.31
SPTSSA-201ENST00000298130 CRISP1P54107 249 aa23.26■■□□□ 1.31
SPTSSA-201ENST00000298130 ZMAT1Q5H9K5 638 aa23.26■■□□□ 1.31
SPTSSA-201ENST00000298130 HOMEZQ8IX15 550 aa23.26■■□□□ 1.31
SPTSSA-201ENST00000298130 OXR1Q8N573 874 aa23.26■■□□□ 1.31
SPTSSA-201ENST00000298130 IQCF1Q8N6M8 205 aa23.26■■□□□ 1.31
SPTSSA-201ENST00000298130 COL4A6Q14031 1691 aa23.25■■□□□ 1.31
SPTSSA-201ENST00000298130 ANTXRLA6NF34 631 aa23.25■■□□□ 1.31
SPTSSA-201ENST00000298130 CXCL14O95715 111 aa23.25■■□□□ 1.31
SPTSSA-201ENST00000298130 ACRP10323 421 aa23.25■■□□□ 1.31
SPTSSA-201ENST00000298130 FCHO2Q0JRZ9 810 aa23.25■■□□□ 1.31
SPTSSA-201ENST00000298130 CNTN1Q12860 1018 aa23.25■■□□□ 1.31
SPTSSA-201ENST00000298130 ZNF181Q2M3W8 571 aa23.25■■□□□ 1.31
SPTSSA-201ENST00000298130 VN1R5Q7Z5H4 357 aa23.25■■□□□ 1.31
SPTSSA-201ENST00000298130 SLC5A11Q8WWX8 675 aa23.25■■□□□ 1.31
SPTSSA-201ENST00000298130 ING5Q8WYH8 240 aa23.25■■□□□ 1.31
SPTSSA-201ENST00000298130 TRMT61AQ96FX7 289 aaKnown RBP23.25■■□□□ 1.31
SPTSSA-201ENST00000298130 LRRTM2O43300 516 aa23.25■■□□□ 1.31
SPTSSA-201ENST00000298130 APOL3O95236 402 aa23.25■■□□□ 1.31
SPTSSA-201ENST00000298130 IFNW1P05000 195 aa23.25■■□□□ 1.31
SPTSSA-201ENST00000298130 DSTNP60981 165 aa23.25■■□□□ 1.31
SPTSSA-201ENST00000298130 MXD1Q05195 221 aa23.25■■□□□ 1.31
SPTSSA-201ENST00000298130 IRF3Q14653 427 aa23.25■■□□□ 1.31
SPTSSA-201ENST00000298130 LRIT3Q3SXY7 679 aa23.25■■□□□ 1.31
SPTSSA-201ENST00000298130 MLIPQ5VWP3 458 aa23.25■■□□□ 1.31
SPTSSA-201ENST00000298130 PNCKQ6P2M8 343 aa23.25■■□□□ 1.31
SPTSSA-201ENST00000298130 SLC34A3Q8N130 599 aa23.25■■□□□ 1.31
SPTSSA-201ENST00000298130 GOT1L1Q8NHS2 421 aaPredicted RBP23.25■■□□□ 1.31
SPTSSA-201ENST00000298130 ZNF689Q96CS4 500 aaPredicted RBP23.25■■□□□ 1.31
SPTSSA-201ENST00000298130 ZSWIM3Q96MP5 696 aa23.25■■□□□ 1.31
SPTSSA-201ENST00000298130 THSD1Q9NS62 852 aa23.25■■□□□ 1.31
SPTSSA-201ENST00000298130 WDR70Q9NW82 654 aa23.25■■□□□ 1.31
SPTSSA-201ENST00000298130 FTSJ1Q9UET6 329 aa23.25■■□□□ 1.31
SPTSSA-201ENST00000298130 TAF4O00268 1085 aa23.24■■□□□ 1.31
SPTSSA-201ENST00000298130 AP3D1O14617 1153 aa23.24■■□□□ 1.31
SPTSSA-201ENST00000298130 FGF18O76093 207 aa23.24■■□□□ 1.31
SPTSSA-201ENST00000298130 ITGA2P17301 1181 aa23.24■■□□□ 1.31
SPTSSA-201ENST00000298130 DCDC1P59894 354 aa23.24■■□□□ 1.31
SPTSSA-201ENST00000298130 ZNF33BQ06732 778 aa23.24■■□□□ 1.31
SPTSSA-201ENST00000298130 ZNF697Q5TEC3 545 aa23.24■■□□□ 1.31
SPTSSA-201ENST00000298130 RAET1GQ6H3X3 334 aa23.24■■□□□ 1.31
SPTSSA-201ENST00000298130 ATCAYQ86WG3 371 aa23.24■■□□□ 1.31
SPTSSA-201ENST00000298130 OR8H2Q8N162 312 aa23.24■■□□□ 1.31
SPTSSA-201ENST00000298130 SLC38A5Q8WUX1 472 aa23.24■■□□□ 1.31
SPTSSA-201ENST00000298130 TIFAQ96CG3 184 aa23.24■■□□□ 1.31
SPTSSA-201ENST00000298130 SDHCQ99643 169 aaPredicted RBP23.24■■□□□ 1.31
SPTSSA-201ENST00000298130 SP140LQ9H930 580 aa23.24■■□□□ 1.31
SPTSSA-201ENST00000298130 RC3H2Q9HBD1 1191 aaKnown RBP23.24■■□□□ 1.31
SPTSSA-201ENST00000298130 CPNE5Q9HCH3 593 aa23.24■■□□□ 1.31
SPTSSA-201ENST00000298130 TMEM98Q9Y2Y6 226 aa23.24■■□□□ 1.31
SPTSSA-201ENST00000298130 XIRP2A4UGR9 3374 aa23.24■■□□□ 1.31
SPTSSA-201ENST00000298130 A6NL46 340 aa23.24■■□□□ 1.31
SPTSSA-201ENST00000298130 OR10H3O60404 316 aa23.24■■□□□ 1.31
SPTSSA-201ENST00000298130 LILRB3O75022 631 aa23.24■■□□□ 1.31
SPTSSA-201ENST00000298130 MED26O95402 600 aa23.24■■□□□ 1.31
SPTSSA-201ENST00000298130 ZNF805Q5CZA5 627 aa23.24■■□□□ 1.31
SPTSSA-201ENST00000298130 CAPSLQ8WWF8 208 aa23.24■■□□□ 1.31
SPTSSA-201ENST00000298130 F2RL3Q96RI0 385 aa23.24■■□□□ 1.31
SPTSSA-201ENST00000298130 YME1L1Q96TA2 773 aa23.24■■□□□ 1.31
SPTSSA-201ENST00000298130 FEZF1A0PJY2 475 aa23.23■■□□□ 1.31
SPTSSA-201ENST00000298130 WASH3PC4AMC7 463 aa23.23■■□□□ 1.31
SPTSSA-201ENST00000298130 HAT1O14929 419 aa23.23■■□□□ 1.31
SPTSSA-201ENST00000298130 COQ9O75208 318 aa23.23■■□□□ 1.31
SPTSSA-201ENST00000298130 MMP12P39900 470 aa23.23■■□□□ 1.31
SPTSSA-201ENST00000298130 LIMS1P48059 325 aa23.23■■□□□ 1.31
SPTSSA-201ENST00000298130 CRB2Q5IJ48 1285 aa23.23■■□□□ 1.31
SPTSSA-201ENST00000298130 SPANXN2Q5MJ10 180 aa23.23■■□□□ 1.31
SPTSSA-201ENST00000298130 NXPE4Q6UWF7 544 aa23.23■■□□□ 1.31
SPTSSA-201ENST00000298130 CACUL1Q86Y37 369 aa23.23■■□□□ 1.31
SPTSSA-201ENST00000298130 LACC1Q8IV20 430 aa23.23■■□□□ 1.31
SPTSSA-201ENST00000298130 OR4D11Q8NGI4 311 aa23.23■■□□□ 1.31
SPTSSA-201ENST00000298130 CEP19Q96LK0 163 aa23.23■■□□□ 1.31
SPTSSA-201ENST00000298130 RAD9AQ99638 391 aa23.23■■□□□ 1.31
SPTSSA-201ENST00000298130 TMEM38AQ9H6F2 299 aa23.23■■□□□ 1.31
SPTSSA-201ENST00000298130 ANGPT4Q9Y264 503 aa23.23■■□□□ 1.31
SPTSSA-201ENST00000298130 A8MV72 311 aaPredicted RBP23.23■■□□□ 1.31
SPTSSA-201ENST00000298130 SOD1P00441 154 aa23.23■■□□□ 1.31
SPTSSA-201ENST00000298130 ARAFP10398 606 aa23.23■■□□□ 1.31
SPTSSA-201ENST00000298130 PCBP3P57721 371 aaKnown RBP23.23■■□□□ 1.31
SPTSSA-201ENST00000298130 CDC20Q12834 499 aa23.23■■□□□ 1.31
SPTSSA-201ENST00000298130 HIST2H2AA3Q6FI13 130 aa23.23■■□□□ 1.31
SPTSSA-201ENST00000298130 FAM83HQ6ZRV2 1179 aaPredicted RBP23.23■■□□□ 1.31
SPTSSA-201ENST00000298130 GPR32P1Q8NGA4 272 aa23.23■■□□□ 1.31
SPTSSA-201ENST00000298130 OR5AR1Q8NGP9 310 aa23.23■■□□□ 1.31
SPTSSA-201ENST00000298130 OR9A1PQ8NGU1 263 aa23.23■■□□□ 1.31
SPTSSA-201ENST00000298130 NXF2Q9GZY0 626 aaKnown RBP23.23■■□□□ 1.31
SPTSSA-201ENST00000298130 TDP1Q9NUW8 608 aa23.23■■□□□ 1.31
SPTSSA-201ENST00000298130 CLN6Q9NWW5 311 aa23.23■■□□□ 1.31
SPTSSA-201ENST00000298130 ZAR1LA6NP61 321 aa23.23■■□□□ 1.31
SPTSSA-201ENST00000298130 LOC110117498-PIK3R3F6TDL0 507 aa23.23■■□□□ 1.31
SPTSSA-201ENST00000298130 TNNI3P19429 210 aa23.23■■□□□ 1.31
SPTSSA-201ENST00000298130 RPS19P39019 145 aaKnown RBP23.23■■□□□ 1.31
SPTSSA-201ENST00000298130 NNMTP40261 264 aa23.23■■□□□ 1.31
SPTSSA-201ENST00000298130 PXNP49023 591 aaPredicted RBP23.23■■□□□ 1.31
SPTSSA-201ENST00000298130 PDE7AQ13946 482 aa23.23■■□□□ 1.31
SPTSSA-201ENST00000298130 ZNF630Q2M218 657 aaPredicted RBP23.23■■□□□ 1.31
SPTSSA-201ENST00000298130 ZNF547Q8IVP9 402 aa23.23■■□□□ 1.31
SPTSSA-201ENST00000298130 ADGRF3Q8IZF5 1079 aa23.23■■□□□ 1.31
SPTSSA-201ENST00000298130 EXOSC8Q96B26 276 aaKnown RBP23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms