RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 OR5P2Q8WZ92 322 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 SLC22A18Q96BI1 424 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 KLHDC7BQ96G42 594 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 TPD52L3Q96J77 140 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 SLC6A18Q96N87 628 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 OR2A14Q96R47 310 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 DPH7Q9BTV6 452 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 TMEM38AQ9H6F2 299 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 SMURF2Q9HAU4 748 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 NEUROD4Q9HD90 331 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 PRDM6Q9NQX0 595 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 FBXL21Q9UKT6 434 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 SNX7Q9UNH6 387 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 MAP4K5Q9Y4K4 846 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 SNX8Q9Y5X2 465 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 A0A087WXM4 84 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 LRIT2A6NDA9 550 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 TNFRSF21O75509 655 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 AQP1P29972 269 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 FRKP42685 505 aaPredicted RBP8.69□□□□□ -1.02
PDPN-201ENST00000294489 MVDP53602 400 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 SLC5A12Q1EHB4 618 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 NADK2Q4G0N4 442 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 SHQ1Q6PI26 577 aaKnown RBP8.69□□□□□ -1.02
PDPN-201ENST00000294489 VTCN1Q7Z7D3 282 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 RBM12BQ8IXT5 1001 aaKnown RBP8.69□□□□□ -1.02
PDPN-201ENST00000294489 MMP21Q8N119 569 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 ARL10Q8N8L6 244 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 OR5AK3PQ8NH89 298 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 RLN3Q8WXF3 142 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 LZICQ8WZA0 190 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 FAIM2Q9BWQ8 316 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 YTHDF1Q9BYJ9 559 aaKnown RBP8.69□□□□□ -1.02
PDPN-201ENST00000294489 TPSD1Q9BZJ3 242 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 ING2Q9H160 280 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 SOX17Q9H6I2 414 aaPredicted RBP8.69□□□□□ -1.02
PDPN-201ENST00000294489 GPATCH2Q9NW75 528 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 TUBA8Q9NY65 449 aaPredicted RBP8.69□□□□□ -1.02
PDPN-201ENST00000294489 PCDHGA2Q9Y5H1 932 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 MDC1Q14676 2089 aaKnown RBP8.69□□□□□ -1.02
PDPN-201ENST00000294489 A0A0A6YYD5 115 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 MYO1GB0I1T2 1018 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 hCG_2039718K7EN88 272 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 HAT1O14929 419 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 HS6ST1O60243 411 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 IFNA14P01570 189 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 CSF2P04141 144 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 BLKP51451 505 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 TPD52P55327 224 aaPredicted RBP8.69□□□□□ -1.02
PDPN-201ENST00000294489 PPP1R8Q12972 351 aaKnown RBP8.69□□□□□ -1.02
PDPN-201ENST00000294489 SCARB2Q14108 478 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 ELOAQ14241 798 aaKnown RBP8.69□□□□□ -1.02
PDPN-201ENST00000294489 PRSS53Q2L4Q9 553 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 ZNF630Q2M218 657 aaPredicted RBP8.69□□□□□ -1.02
PDPN-201ENST00000294489 COX20Q5RI15 118 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 RNF130Q86XS8 419 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 HS3ST5Q8IZT8 346 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 SRFBP1Q8NEF9 429 aaKnown RBP8.69□□□□□ -1.02
PDPN-201ENST00000294489 OR4E2Q8NGC2 313 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 ZFP28Q8NHY6 868 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 NT5CQ8TCD5 201 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 DGCR14Q96DF8 476 aaKnown RBP8.69□□□□□ -1.02
PDPN-201ENST00000294489 TM4SF19Q96DZ7 209 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 ZBED6CLQ96FA7 236 aaPredicted RBP8.69□□□□□ -1.02
PDPN-201ENST00000294489 C17orf62Q9BQA9 187 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 DOHHQ9BU89 302 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 TRIM4Q9C037 500 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 TOR3AQ9H497 397 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 UCK1Q9HA47 277 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 C1GALT1Q9NS00 363 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 ACSL6Q9UKU0 697 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 ABCG2Q9UNQ0 655 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 PCDHGA4Q9Y5G9 962 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 OR2A25A4D2G3 310 aa8.68□□□□□ -1.02
PDPN-201ENST00000294489 GUCY1B2O75343 617 aa8.68□□□□□ -1.02
PDPN-201ENST00000294489 SEMG1P04279 462 aa8.68□□□□□ -1.02
PDPN-201ENST00000294489 DRD2P14416 443 aa8.68□□□□□ -1.02
PDPN-201ENST00000294489 NME1P15531 152 aaKnown RBP8.68□□□□□ -1.02
PDPN-201ENST00000294489 DNAJA1P31689 397 aaKnown RBP8.68□□□□□ -1.02
PDPN-201ENST00000294489 TSFMP43897 325 aaKnown RBP8.68□□□□□ -1.02
PDPN-201ENST00000294489 CASP9P55211 416 aa8.68□□□□□ -1.02
PDPN-201ENST00000294489 RACK1P63244 317 aaKnown RBP8.68□□□□□ -1.02
PDPN-201ENST00000294489 SELENOWP63302 87 aa8.68□□□□□ -1.02
PDPN-201ENST00000294489 VLDLRP98155 873 aa8.68□□□□□ -1.02
PDPN-201ENST00000294489 GPR18Q14330 331 aa8.68□□□□□ -1.02
PDPN-201ENST00000294489 SLC9A5Q14940 896 aa8.68□□□□□ -1.02
PDPN-201ENST00000294489 PLCL1Q15111 1095 aa8.68□□□□□ -1.02
PDPN-201ENST00000294489 TCEA2Q15560 299 aa8.68□□□□□ -1.02
PDPN-201ENST00000294489 SLC36A4Q6YBV0 504 aa8.68□□□□□ -1.02
PDPN-201ENST00000294489 PIWIL3Q7Z3Z3 882 aaKnown RBP8.68□□□□□ -1.02
PDPN-201ENST00000294489 C17orf82Q86X59 251 aaPredicted RBP8.68□□□□□ -1.02
PDPN-201ENST00000294489 SLC30A8Q8IWU4 369 aa8.68□□□□□ -1.02
PDPN-201ENST00000294489 FAM20CQ8IXL6 584 aa8.68□□□□□ -1.02
PDPN-201ENST00000294489 C8orf59Q8N0T1 100 aaPredicted RBP8.68□□□□□ -1.02
PDPN-201ENST00000294489 DNASE2BQ8WZ79 361 aa8.68□□□□□ -1.02
PDPN-201ENST00000294489 MUS81Q96NY9 551 aa8.68□□□□□ -1.02
PDPN-201ENST00000294489 KCNC2Q96PR1 638 aa8.68□□□□□ -1.02
PDPN-201ENST00000294489 SRMSQ9H3Y6 488 aa8.68□□□□□ -1.02
PDPN-201ENST00000294489 REEP1Q9H902 201 aa8.68□□□□□ -1.02
PDPN-201ENST00000294489 SYNPO2LQ9H987 977 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms