RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 TLX2O43763 284 aaPredicted RBP11.38□□□□□ -0.59
SYNGAP1-201ENST00000293748 SLC19A2O60779 497 aa11.38□□□□□ -0.59
SYNGAP1-201ENST00000293748 OR2B3O76000 313 aa11.38□□□□□ -0.59
SYNGAP1-201ENST00000293748 MAP3K8P41279 467 aa11.38□□□□□ -0.59
SYNGAP1-201ENST00000293748 MAP2K3P46734 347 aa11.38□□□□□ -0.59
SYNGAP1-201ENST00000293748 BTN3A2P78410 334 aa11.38□□□□□ -0.59
SYNGAP1-201ENST00000293748 GRIK2Q13002 908 aa11.38□□□□□ -0.59
SYNGAP1-201ENST00000293748 SYPL2Q5VXT5 272 aa11.38□□□□□ -0.59
SYNGAP1-201ENST00000293748 NANOGP8Q6NSW7 305 aa11.38□□□□□ -0.59
SYNGAP1-201ENST00000293748 CYS1Q717R9 158 aa11.38□□□□□ -0.59
SYNGAP1-201ENST00000293748 DDX1Q92499 740 aaKnown RBP11.38□□□□□ -0.59
SYNGAP1-201ENST00000293748 BCL7BQ9BQE9 202 aa11.38□□□□□ -0.59
SYNGAP1-201ENST00000293748 HEPHQ9BQS7 1158 aa11.38□□□□□ -0.59
SYNGAP1-201ENST00000293748 TAPBPLQ9BX59 468 aa11.38□□□□□ -0.59
SYNGAP1-201ENST00000293748 RETREG1Q9H6L5 497 aa11.38□□□□□ -0.59
SYNGAP1-201ENST00000293748 NANOGQ9H9S0 305 aa11.38□□□□□ -0.59
SYNGAP1-201ENST00000293748 CDH10Q9Y6N8 788 aa11.38□□□□□ -0.59
SYNGAP1-201ENST00000293748 PTPRSQ13332 1948 aa11.38□□□□□ -0.59
SYNGAP1-201ENST00000293748 PLXNA4Q9HCM2 1894 aa11.38□□□□□ -0.59
SYNGAP1-201ENST00000293748 OLFM2O95897 454 aa11.38□□□□□ -0.59
SYNGAP1-201ENST00000293748 IFNA21P01568 189 aa11.38□□□□□ -0.59
SYNGAP1-201ENST00000293748 ARSAP15289 507 aa11.38□□□□□ -0.59
SYNGAP1-201ENST00000293748 AKT2P31751 481 aa11.38□□□□□ -0.59
SYNGAP1-201ENST00000293748 KCNC4Q03721 635 aa11.38□□□□□ -0.59
SYNGAP1-201ENST00000293748 CEACAM7Q14002 265 aa11.38□□□□□ -0.59
SYNGAP1-201ENST00000293748 PIGGQ5H8A4 983 aa11.38□□□□□ -0.59
SYNGAP1-201ENST00000293748 CLEC12AQ5QGZ9 265 aa11.38□□□□□ -0.59
SYNGAP1-201ENST00000293748 ZNF678Q5SXM1 525 aa11.38□□□□□ -0.59
SYNGAP1-201ENST00000293748 ATG9BQ674R7 924 aa11.38□□□□□ -0.59
SYNGAP1-201ENST00000293748 SHQ1Q6PI26 577 aaKnown RBP11.38□□□□□ -0.59
SYNGAP1-201ENST00000293748 CHST9Q7L1S5 443 aa11.38□□□□□ -0.59
SYNGAP1-201ENST00000293748 GPR135Q8IZ08 494 aa11.38□□□□□ -0.59
SYNGAP1-201ENST00000293748 C1orf52Q8N6N3 182 aaKnown RBP11.38□□□□□ -0.59
SYNGAP1-201ENST00000293748 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.38□□□□□ -0.59
SYNGAP1-201ENST00000293748 ZNF675Q8TD23 568 aa11.38□□□□□ -0.59
SYNGAP1-201ENST00000293748 CPNE5Q9HCH3 593 aa11.38□□□□□ -0.59
SYNGAP1-201ENST00000293748 EMC3Q9P0I2 261 aa11.38□□□□□ -0.59
SYNGAP1-201ENST00000293748 CYTH4Q9UIA0 394 aa11.38□□□□□ -0.59
SYNGAP1-201ENST00000293748 FCF1Q9Y324 198 aaKnown RBP11.38□□□□□ -0.59
SYNGAP1-201ENST00000293748 IFT52Q9Y366 437 aa11.38□□□□□ -0.59
SYNGAP1-201ENST00000293748 CDC7O00311 574 aa11.38□□□□□ -0.59
SYNGAP1-201ENST00000293748 CBSLP0DN79 551 aa11.38□□□□□ -0.59
SYNGAP1-201ENST00000293748 ELK4P28324 431 aa11.38□□□□□ -0.59
SYNGAP1-201ENST00000293748 GJA4P35212 333 aa11.38□□□□□ -0.59
SYNGAP1-201ENST00000293748 CBSP35520 551 aa11.38□□□□□ -0.59
SYNGAP1-201ENST00000293748 AVPR1BP47901 424 aa11.38□□□□□ -0.59
SYNGAP1-201ENST00000293748 PLA2G16P53816 162 aa11.38□□□□□ -0.59
SYNGAP1-201ENST00000293748 ST3GAL3Q11203 375 aa11.38□□□□□ -0.59
SYNGAP1-201ENST00000293748 RPA4Q13156 261 aa11.38□□□□□ -0.59
SYNGAP1-201ENST00000293748 PLA2G4EQ3MJ16 856 aa11.38□□□□□ -0.59
SYNGAP1-201ENST00000293748 SIRPB2Q5JXA9 342 aa11.38□□□□□ -0.59
SYNGAP1-201ENST00000293748 IQCHQ86VS3 1027 aa11.38□□□□□ -0.59
SYNGAP1-201ENST00000293748 PIAS4Q8N2W9 510 aaPredicted RBP11.38□□□□□ -0.59
SYNGAP1-201ENST00000293748 TMED9Q9BVK6 235 aa11.38□□□□□ -0.59
SYNGAP1-201ENST00000293748 FBRSL1Q9HCM7 1045 aaKnown RBP11.38□□□□□ -0.59
SYNGAP1-201ENST00000293748 UBQLN2Q9UHD9 624 aa11.38□□□□□ -0.59
SYNGAP1-201ENST00000293748 GPN3Q9UHW5 284 aaPredicted RBP11.38□□□□□ -0.59
SYNGAP1-201ENST00000293748 A0A0J9YVX5 310 aa11.38□□□□□ -0.59
SYNGAP1-201ENST00000293748 CENPBD1B2RD01 187 aa11.38□□□□□ -0.59
SYNGAP1-201ENST00000293748 MOSPD3O75425 235 aa11.38□□□□□ -0.59
SYNGAP1-201ENST00000293748 CYP17A1P05093 508 aa11.38□□□□□ -0.59
SYNGAP1-201ENST00000293748 STT3AP46977 705 aa11.38□□□□□ -0.59
SYNGAP1-201ENST00000293748 PPP5CP53041 499 aa11.38□□□□□ -0.59
SYNGAP1-201ENST00000293748 VLDLRP98155 873 aa11.38□□□□□ -0.59
SYNGAP1-201ENST00000293748 ST3GAL4Q11206 333 aa11.38□□□□□ -0.59
SYNGAP1-201ENST00000293748 HMBOX1Q6NT76 420 aa11.38□□□□□ -0.59
SYNGAP1-201ENST00000293748 AMIGO1Q86WK6 493 aa11.38□□□□□ -0.59
SYNGAP1-201ENST00000293748 IGDCC3Q8IVU1 814 aa11.38□□□□□ -0.59
SYNGAP1-201ENST00000293748 CHERPQ8IWX8 916 aaKnown RBP11.38□□□□□ -0.59
SYNGAP1-201ENST00000293748 OR5T3Q8NGG3 340 aa11.38□□□□□ -0.59
SYNGAP1-201ENST00000293748 NKD1Q969G9 470 aa11.38□□□□□ -0.59
SYNGAP1-201ENST00000293748 RAB11FIP5Q9BXF6 653 aa11.38□□□□□ -0.59
SYNGAP1-201ENST00000293748 CCL26Q9Y258 94 aa11.38□□□□□ -0.59
SYNGAP1-201ENST00000293748 PCDHB3Q9Y5E6 796 aa11.38□□□□□ -0.59
SYNGAP1-201ENST00000293748 PSAT1Q9Y617 370 aa11.38□□□□□ -0.59
SYNGAP1-201ENST00000293748 ELOA3DA6NLF2 546 aaPredicted RBP11.37□□□□□ -0.59
SYNGAP1-201ENST00000293748 LRRN3E7EW58 273 aa11.37□□□□□ -0.59
SYNGAP1-201ENST00000293748 VIPP01282 170 aa11.37□□□□□ -0.59
SYNGAP1-201ENST00000293748 GNAO1P09471 354 aa11.37□□□□□ -0.59
SYNGAP1-201ENST00000293748 CHRM1P11229 460 aaPredicted RBP11.37□□□□□ -0.59
SYNGAP1-201ENST00000293748 EIF2S3P41091 472 aaKnown RBP11.37□□□□□ -0.59
SYNGAP1-201ENST00000293748 PSMA6P60900 246 aaKnown RBP11.37□□□□□ -0.59
SYNGAP1-201ENST00000293748 NFATC3Q12968 1075 aa11.37□□□□□ -0.59
SYNGAP1-201ENST00000293748 SLBPQ14493 270 aaKnown RBP eCLIP11.37□□□□□ -0.59
SYNGAP1-201ENST00000293748 PTGR1Q14914 329 aa11.37□□□□□ -0.59
SYNGAP1-201ENST00000293748 ELOA3BQ3SY89 546 aa11.37□□□□□ -0.59
SYNGAP1-201ENST00000293748 CYBRD1Q53TN4 286 aa11.37□□□□□ -0.59
SYNGAP1-201ENST00000293748 TMEM236Q5W0B7 351 aa11.37□□□□□ -0.59
SYNGAP1-201ENST00000293748 FAAH2Q6GMR7 532 aa11.37□□□□□ -0.59
SYNGAP1-201ENST00000293748 POMZP3Q6PJE2 187 aa11.37□□□□□ -0.59
SYNGAP1-201ENST00000293748 GALNT13Q8IUC8 556 aa11.37□□□□□ -0.59
SYNGAP1-201ENST00000293748 NXPE1Q8N323 547 aa11.37□□□□□ -0.59
SYNGAP1-201ENST00000293748 CHCHD4Q8N4Q1 142 aa11.37□□□□□ -0.59
SYNGAP1-201ENST00000293748 ELOA3Q8NG57 546 aa11.37□□□□□ -0.59
SYNGAP1-201ENST00000293748 STOML3Q8TAV4 291 aa11.37□□□□□ -0.59
SYNGAP1-201ENST00000293748 SLC22A12Q96S37 553 aa11.37□□□□□ -0.59
SYNGAP1-201ENST00000293748 NPY6RQ99463 290 aa11.37□□□□□ -0.59
SYNGAP1-201ENST00000293748 LRRN3Q9H3W5 708 aa11.37□□□□□ -0.59
SYNGAP1-201ENST00000293748 NEUROD4Q9HD90 331 aa11.37□□□□□ -0.59
SYNGAP1-201ENST00000293748 LTB4R2Q9NPC1 389 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms