RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 SF3B4Q15427 424 aaKnown RBP eCLIP10.93□□□□□ -0.662e-7■■□□□ 12.6
NPC1L1-201ENST00000289547 ZMIZ2Q8NF64 920 aa10.93□□□□□ -0.66
NPC1L1-201ENST00000289547 OR10H4Q8NGA5 316 aa10.93□□□□□ -0.66
NPC1L1-201ENST00000289547 ISG20Q96AZ6 181 aaKnown RBP10.93□□□□□ -0.66
NPC1L1-201ENST00000289547 LMLNQ96KR4 655 aa10.93□□□□□ -0.66
NPC1L1-201ENST00000289547 MGLLQ99685 303 aa10.93□□□□□ -0.66
NPC1L1-201ENST00000289547 PRRX2Q99811 253 aa10.93□□□□□ -0.66
NPC1L1-201ENST00000289547 SIAEQ9HAT2 523 aa10.93□□□□□ -0.66
NPC1L1-201ENST00000289547 CTPS2Q9NRF8 586 aa10.93□□□□□ -0.66
NPC1L1-201ENST00000289547 SCAMP1O15126 338 aa10.93□□□□□ -0.66
NPC1L1-201ENST00000289547 PI15O43692 258 aa10.93□□□□□ -0.66
NPC1L1-201ENST00000289547 NARSO43776 548 aaKnown RBP10.93□□□□□ -0.66
NPC1L1-201ENST00000289547 HPRP00739 348 aa10.93□□□□□ -0.66
NPC1L1-201ENST00000289547 ALAS2P22557 587 aa10.93□□□□□ -0.66
NPC1L1-201ENST00000289547 SEMG2Q02383 582 aa10.93□□□□□ -0.66
NPC1L1-201ENST00000289547 GSTM4Q03013 218 aa10.93□□□□□ -0.66
NPC1L1-201ENST00000289547 MRPL58Q14197 206 aaKnown RBP10.93□□□□□ -0.66
NPC1L1-201ENST00000289547 FAM109AQ8N4B1 249 aa10.93□□□□□ -0.66
NPC1L1-201ENST00000289547 TRAM1L1Q8N609 369 aa10.93□□□□□ -0.66
NPC1L1-201ENST00000289547 POMGNT2Q8NAT1 580 aa10.93□□□□□ -0.66
NPC1L1-201ENST00000289547 SIDT2Q8NBJ9 832 aaKnown RBP10.93□□□□□ -0.66
NPC1L1-201ENST00000289547 FAM98AQ8NCA5 519 aaKnown RBP10.93□□□□□ -0.66
NPC1L1-201ENST00000289547 OR5J2Q8NH18 312 aa10.93□□□□□ -0.66
NPC1L1-201ENST00000289547 C1orf216Q8TAB5 229 aa10.93□□□□□ -0.66
NPC1L1-201ENST00000289547 CCDC32Q9BV29 185 aa10.93□□□□□ -0.66
NPC1L1-201ENST00000289547 TMED9Q9BVK6 235 aa10.93□□□□□ -0.66
NPC1L1-201ENST00000289547 SPATA9Q9BWV2 254 aa10.93□□□□□ -0.66
NPC1L1-201ENST00000289547 SLC17A9Q9BYT1 436 aa10.93□□□□□ -0.66
NPC1L1-201ENST00000289547 TM9SF3Q9HD45 589 aa10.93□□□□□ -0.66
NPC1L1-201ENST00000289547 ICMTO60725 284 aa10.93□□□□□ -0.66
NPC1L1-201ENST00000289547 ADRB3P13945 408 aa10.93□□□□□ -0.66
NPC1L1-201ENST00000289547 JUNDP17535 347 aa10.93□□□□□ -0.66
NPC1L1-201ENST00000289547 CCR4P51679 360 aa10.93□□□□□ -0.66
NPC1L1-201ENST00000289547 BIKQ13323 160 aa10.93□□□□□ -0.66
NPC1L1-201ENST00000289547 CHRNA6Q15825 494 aa10.93□□□□□ -0.66
NPC1L1-201ENST00000289547 RASGRP3Q8IV61 690 aa10.93□□□□□ -0.66
NPC1L1-201ENST00000289547 TMEM130Q8N3G9 435 aa10.93□□□□□ -0.66
NPC1L1-201ENST00000289547 ZSCAN1Q8NBB4 408 aa10.93□□□□□ -0.66
NPC1L1-201ENST00000289547 KIAA1143Q96AT1 154 aaPredicted RBP10.93□□□□□ -0.66
NPC1L1-201ENST00000289547 APOBEC3BQ9UH17 382 aaKnown RBP10.93□□□□□ -0.66
NPC1L1-201ENST00000289547 ENPP5Q9UJA9 477 aa10.93□□□□□ -0.66
NPC1L1-201ENST00000289547 ACSL5Q9ULC5 683 aa10.93□□□□□ -0.66
NPC1L1-201ENST00000289547 GPR34Q9UPC5 381 aa10.93□□□□□ -0.66
NPC1L1-201ENST00000289547 MYH11P35749 1972 aa10.92□□□□□ -0.66
NPC1L1-201ENST00000289547 A6NL46 340 aa10.92□□□□□ -0.66
NPC1L1-201ENST00000289547 HCN1O60741 890 aa10.92□□□□□ -0.66
NPC1L1-201ENST00000289547 SRCP12931 536 aa10.92□□□□□ -0.66
NPC1L1-201ENST00000289547 ENGP17813 658 aa10.92□□□□□ -0.66
NPC1L1-201ENST00000289547 BMP8BP34820 402 aa10.92□□□□□ -0.66
NPC1L1-201ENST00000289547 SOX9P48436 509 aa10.92□□□□□ -0.66
NPC1L1-201ENST00000289547 ATP4BP51164 291 aa10.92□□□□□ -0.66
NPC1L1-201ENST00000289547 SPANXN4Q5MJ08 99 aa10.92□□□□□ -0.66
NPC1L1-201ENST00000289547 C10orf62Q5T681 223 aaPredicted RBP10.92□□□□□ -0.66
NPC1L1-201ENST00000289547 PARM1Q6UWI2 310 aa10.92□□□□□ -0.66
NPC1L1-201ENST00000289547 LRRN1Q6UXK5 716 aa10.92□□□□□ -0.66
NPC1L1-201ENST00000289547 SPERTQ8NA61 448 aa10.92□□□□□ -0.66
NPC1L1-201ENST00000289547 SNX33Q8WV41 574 aa10.92□□□□□ -0.66
NPC1L1-201ENST00000289547 ALPK1Q96QP1 1244 aa10.92□□□□□ -0.66
NPC1L1-201ENST00000289547 TMEM181Q9P2C4 612 aa10.92□□□□□ -0.66
NPC1L1-201ENST00000289547 KCNJ13O60928 360 aa10.92□□□□□ -0.66
NPC1L1-201ENST00000289547 KERAO60938 352 aa10.92□□□□□ -0.66
NPC1L1-201ENST00000289547 POP7O75817 140 aaKnown RBP10.92□□□□□ -0.66
NPC1L1-201ENST00000289547 HLA-DPB1P04440 258 aa10.92□□□□□ -0.66
NPC1L1-201ENST00000289547 MLLT3P42568 568 aaPredicted RBP10.92□□□□□ -0.66
NPC1L1-201ENST00000289547 GUCA1AP43080 201 aaPredicted RBP10.92□□□□□ -0.66
NPC1L1-201ENST00000289547 OR4D2P58180 307 aa10.92□□□□□ -0.66
NPC1L1-201ENST00000289547 RPP38P78345 283 aaKnown RBP10.92□□□□□ -0.66
NPC1L1-201ENST00000289547 KLHL24Q6TFL4 600 aa10.92□□□□□ -0.66
NPC1L1-201ENST00000289547 PIM3Q86V86 326 aa10.92□□□□□ -0.66
NPC1L1-201ENST00000289547 CHERPQ8IWX8 916 aaKnown RBP10.92□□□□□ -0.66
NPC1L1-201ENST00000289547 PEBP4Q96S96 227 aa10.92□□□□□ -0.66
NPC1L1-201ENST00000289547 TBX5Q99593 518 aa10.92□□□□□ -0.66
NPC1L1-201ENST00000289547 MCMBPQ9BTE3 642 aa10.92□□□□□ -0.66
NPC1L1-201ENST00000289547 MS4A12Q9NXJ0 267 aa10.92□□□□□ -0.66
NPC1L1-201ENST00000289547 DNAJC27Q9NZQ0 273 aa10.92□□□□□ -0.66
NPC1L1-201ENST00000289547 POLR1DQ9Y2S0 133 aa10.92□□□□□ -0.66
NPC1L1-201ENST00000289547 ANKRD34BA5PLL1 514 aa10.92□□□□□ -0.66
NPC1L1-201ENST00000289547 CLDN4O14493 209 aa10.92□□□□□ -0.66
NPC1L1-201ENST00000289547 IFNGP01579 166 aa10.92□□□□□ -0.66
NPC1L1-201ENST00000289547 STSP08842 583 aa10.92□□□□□ -0.66
NPC1L1-201ENST00000289547 GADD45AP24522 165 aa10.92□□□□□ -0.66
NPC1L1-201ENST00000289547 EVI2BP34910 448 aa10.92□□□□□ -0.66
NPC1L1-201ENST00000289547 PSMA6P60900 246 aaKnown RBP10.92□□□□□ -0.66
NPC1L1-201ENST00000289547 PITX1P78337 314 aaPredicted RBP10.92□□□□□ -0.66
NPC1L1-201ENST00000289547 ABHD18Q0P651 414 aa10.92□□□□□ -0.66
NPC1L1-201ENST00000289547 CRB2Q5IJ48 1285 aa10.92□□□□□ -0.66
NPC1L1-201ENST00000289547 SPARTQ8N0X7 666 aa10.92□□□□□ -0.66
NPC1L1-201ENST00000289547 METTL25Q8N6Q8 603 aa10.92□□□□□ -0.66
NPC1L1-201ENST00000289547 HSH2DQ96JZ2 352 aa10.92□□□□□ -0.66
NPC1L1-201ENST00000289547 MMP28Q9H239 520 aa10.92□□□□□ -0.66
NPC1L1-201ENST00000289547 RC3H2Q9HBD1 1191 aaKnown RBP10.92□□□□□ -0.66
NPC1L1-201ENST00000289547 FKBP14Q9NWM8 211 aa10.92□□□□□ -0.66
NPC1L1-201ENST00000289547 SLC2A6Q9UGQ3 507 aa10.92□□□□□ -0.66
NPC1L1-201ENST00000289547 C7orf72A4D263 438 aa10.92□□□□□ -0.66
NPC1L1-201ENST00000289547 VEGFDO43915 354 aa10.92□□□□□ -0.66
NPC1L1-201ENST00000289547 CKMT1AP12532 417 aa10.92□□□□□ -0.66
NPC1L1-201ENST00000289547 HTR1EP28566 365 aa10.92□□□□□ -0.66
NPC1L1-201ENST00000289547 PGGT1BP53609 377 aa10.92□□□□□ -0.66
NPC1L1-201ENST00000289547 STXBP1P61764 594 aaKnown RBP10.92□□□□□ -0.66
NPC1L1-201ENST00000289547 RFTN2Q52LD8 501 aaPredicted RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms