RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 UBQLNLQ8IYU4 475 aa15.84■□□□□ 0.13
SH3RF1-201ENST00000284637 SNX18Q96RF0 628 aa15.84■□□□□ 0.13
SH3RF1-201ENST00000284637 PCYT2Q99447 389 aa15.84■□□□□ 0.13
SH3RF1-201ENST00000284637 DOHHQ9BU89 302 aa15.84■□□□□ 0.13
SH3RF1-201ENST00000284637 MROQ9BYG7 248 aa15.84■□□□□ 0.13
SH3RF1-201ENST00000284637 REEP4Q9H6H4 257 aa15.84■□□□□ 0.13
SH3RF1-201ENST00000284637 ZFR2Q9UPR6 939 aaKnown RBP15.84■□□□□ 0.13
SH3RF1-201ENST00000284637 ARSDP51689 593 aa15.84■□□□□ 0.13
SH3RF1-201ENST00000284637 SH3BP2P78314 561 aa15.84■□□□□ 0.13
SH3RF1-201ENST00000284637 CHAF1BQ13112 559 aa15.84■□□□□ 0.13
SH3RF1-201ENST00000284637 ABCA11PQ4W5N1 156 aa15.84■□□□□ 0.13
SH3RF1-201ENST00000284637 C22orf42Q6IC83 251 aa15.84■□□□□ 0.13
SH3RF1-201ENST00000284637 HMGN2P46Q86SG4 172 aa15.84■□□□□ 0.13
SH3RF1-201ENST00000284637 LHFPL3Q86UP9 236 aa15.84■□□□□ 0.13
SH3RF1-201ENST00000284637 SRRDQ9UH36 339 aa15.84■□□□□ 0.13
SH3RF1-201ENST00000284637 AGAP5A6NIR3 686 aa15.84■□□□□ 0.13
SH3RF1-201ENST00000284637 TOXO94900 526 aa15.84■□□□□ 0.13
SH3RF1-201ENST00000284637 MT-ND5P03915 603 aa15.84■□□□□ 0.13
SH3RF1-201ENST00000284637 ZBTB48P10074 688 aaPredicted RBP15.84■□□□□ 0.13
SH3RF1-201ENST00000284637 ENDOUP21128 410 aaKnown RBP15.84■□□□□ 0.13
SH3RF1-201ENST00000284637 NFATC2Q13469 925 aa15.84■□□□□ 0.13
SH3RF1-201ENST00000284637 SHKBP1Q8TBC3 707 aa15.84■□□□□ 0.13
SH3RF1-201ENST00000284637 CD99L2Q8TCZ2 262 aa15.84■□□□□ 0.13
SH3RF1-201ENST00000284637 RFT1Q96AA3 541 aa15.84■□□□□ 0.13
SH3RF1-201ENST00000284637 S100A16Q96FQ6 103 aaKnown RBP15.84■□□□□ 0.13
SH3RF1-201ENST00000284637 TBL1XR1Q9BZK7 514 aa15.84■□□□□ 0.13
SH3RF1-201ENST00000284637 RNF121Q9H920 327 aa15.84■□□□□ 0.13
SH3RF1-201ENST00000284637 NANSQ9NR45 359 aa15.84■□□□□ 0.13
SH3RF1-201ENST00000284637 NDUFAF4Q9P032 175 aa15.84■□□□□ 0.13
SH3RF1-201ENST00000284637 FARSAQ9Y285 508 aaKnown RBP15.84■□□□□ 0.13
SH3RF1-201ENST00000284637 TMEM98Q9Y2Y6 226 aa15.84■□□□□ 0.13
SH3RF1-201ENST00000284637 DLG5Q8TDM6 1919 aa15.84■□□□□ 0.13
SH3RF1-201ENST00000284637 NME4O00746 187 aa15.83■□□□□ 0.13
SH3RF1-201ENST00000284637 TLX3O43711 291 aaPredicted RBP15.83■□□□□ 0.13
SH3RF1-201ENST00000284637 GALEQ14376 348 aa15.83■□□□□ 0.13
SH3RF1-201ENST00000284637 GK3PQ14409 553 aa15.83■□□□□ 0.13
SH3RF1-201ENST00000284637 GRK1Q15835 563 aa15.83■□□□□ 0.13
SH3RF1-201ENST00000284637 OCLNQ16625 522 aa15.83■□□□□ 0.13
SH3RF1-201ENST00000284637 C15orf40Q8WUR7 153 aa15.83■□□□□ 0.13
SH3RF1-201ENST00000284637 MCHR1Q99705 422 aa15.83■□□□□ 0.13
SH3RF1-201ENST00000284637 ZNF304Q9HCX3 659 aa15.83■□□□□ 0.13
SH3RF1-201ENST00000284637 EXOSC1Q9Y3B2 195 aaKnown RBP15.83■□□□□ 0.13
SH3RF1-201ENST00000284637 KIF1AQ12756 1690 aa15.83■□□□□ 0.13
SH3RF1-201ENST00000284637 BLOC1S5-TXNDC5H3BN57 136 aa15.83■□□□□ 0.12
SH3RF1-201ENST00000284637 C2orf27AQ580R0 203 aa15.83■□□□□ 0.12
SH3RF1-201ENST00000284637 C15orf39Q6ZRI6 1047 aa15.83■□□□□ 0.12
SH3RF1-201ENST00000284637 GALNT7Q86SF2 657 aa15.83■□□□□ 0.12
SH3RF1-201ENST00000284637 OR8K3Q8NH51 312 aa15.83■□□□□ 0.12
SH3RF1-201ENST00000284637 PNO1Q9NRX1 252 aaKnown RBP15.83■□□□□ 0.12
SH3RF1-201ENST00000284637 MYH6P13533 1939 aa15.83■□□□□ 0.12
SH3RF1-201ENST00000284637 CD47Q08722 323 aa15.83■□□□□ 0.12
SH3RF1-201ENST00000284637 SLC25A25Q6KCM7 469 aa15.83■□□□□ 0.12
SH3RF1-201ENST00000284637 ARSKQ6UWY0 536 aa15.83■□□□□ 0.12
SH3RF1-201ENST00000284637 TMCO2Q7Z6W1 182 aaPredicted RBP15.83■□□□□ 0.12
SH3RF1-201ENST00000284637 OR6Q1Q8NGQ2 317 aa15.83■□□□□ 0.12
SH3RF1-201ENST00000284637 SLC22A18Q96BI1 424 aa15.83■□□□□ 0.12
SH3RF1-201ENST00000284637 C17orf62Q9BQA9 187 aa15.83■□□□□ 0.12
SH3RF1-201ENST00000284637 WDR45Q9Y484 360 aa15.83■□□□□ 0.12
SH3RF1-201ENST00000284637 RHPN2P1A8MT19 583 aa15.83■□□□□ 0.12
SH3RF1-201ENST00000284637 FLRT2O43155 660 aa15.83■□□□□ 0.12
SH3RF1-201ENST00000284637 EEF1E1O43324 174 aaKnown RBP15.83■□□□□ 0.12
SH3RF1-201ENST00000284637 CDC40O60508 579 aaKnown RBP eCLIP15.83■□□□□ 0.12
SH3RF1-201ENST00000284637 TRAM2Q15035 370 aa15.83■□□□□ 0.12
SH3RF1-201ENST00000284637 OR4D1Q15615 310 aa15.83■□□□□ 0.12
SH3RF1-201ENST00000284637 PRSS48Q7RTY5 328 aa15.83■□□□□ 0.12
SH3RF1-201ENST00000284637 GPRIN1Q7Z2K8 1008 aa15.83■□□□□ 0.12
SH3RF1-201ENST00000284637 PDZD9Q8IXQ8 264 aa15.83■□□□□ 0.12
SH3RF1-201ENST00000284637 PNPLA1Q8N8W4 532 aa15.83■□□□□ 0.12
SH3RF1-201ENST00000284637 OR56A1Q8NGH5 318 aa15.83■□□□□ 0.12
SH3RF1-201ENST00000284637 RHOXF1Q8NHV9 184 aa15.83■□□□□ 0.12
SH3RF1-201ENST00000284637 NDNFQ8TB73 568 aa15.83■□□□□ 0.12
SH3RF1-201ENST00000284637 SCAMP4Q969E2 229 aa15.83■□□□□ 0.12
SH3RF1-201ENST00000284637 KCNK6Q9Y257 313 aa15.83■□□□□ 0.12
SH3RF1-201ENST00000284637 A0A1W2PPK0 400 aa15.82■□□□□ 0.12
SH3RF1-201ENST00000284637 SLC19A2O60779 497 aa15.82■□□□□ 0.12
SH3RF1-201ENST00000284637 MITFO75030 526 aaPredicted RBP15.82■□□□□ 0.12
SH3RF1-201ENST00000284637 CLUP10909 449 aa15.82■□□□□ 0.12
SH3RF1-201ENST00000284637 PCSK6P29122 969 aa15.82■□□□□ 0.12
SH3RF1-201ENST00000284637 CDKN1CP49918 316 aaPredicted RBP15.82■□□□□ 0.12
SH3RF1-201ENST00000284637 S100A10P60903 97 aa15.82■□□□□ 0.12
SH3RF1-201ENST00000284637 PSAPL1Q6NUJ1 521 aa15.82■□□□□ 0.12
SH3RF1-201ENST00000284637 C22orf39Q6P5X5 142 aa15.82■□□□□ 0.12
SH3RF1-201ENST00000284637 ZFAND4Q86XD8 727 aa15.82■□□□□ 0.12
SH3RF1-201ENST00000284637 MCEMP1Q8IX19 187 aa15.82■□□□□ 0.12
SH3RF1-201ENST00000284637 SPARTQ8N0X7 666 aa15.82■□□□□ 0.12
SH3RF1-201ENST00000284637 OSTF1Q92882 214 aa15.82■□□□□ 0.12
SH3RF1-201ENST00000284637 FBXL3Q9UKT7 428 aa15.82■□□□□ 0.12
SH3RF1-201ENST00000284637 CDH10Q9Y6N8 788 aa15.82■□□□□ 0.12
SH3RF1-201ENST00000284637 TMEM150CB9EJG8 249 aa15.82■□□□□ 0.12
SH3RF1-201ENST00000284637 ZNF670-ZNF695F2Z2N8 137 aa15.82■□□□□ 0.12
SH3RF1-201ENST00000284637 CCKBRP32239 447 aa15.82■□□□□ 0.12
SH3RF1-201ENST00000284637 INHBCP55103 352 aa15.82■□□□□ 0.12
SH3RF1-201ENST00000284637 WNT7BP56706 349 aa15.82■□□□□ 0.12
SH3RF1-201ENST00000284637 PRKCZQ05513 592 aa15.82■□□□□ 0.12
SH3RF1-201ENST00000284637 VRTNQ9H8Y1 702 aa15.82■□□□□ 0.12
SH3RF1-201ENST00000284637 LRRN3E7EW58 273 aa15.82■□□□□ 0.12
SH3RF1-201ENST00000284637 MAFKO60675 156 aa15.82■□□□□ 0.12
SH3RF1-201ENST00000284637 OAZ2O95190 189 aa15.82■□□□□ 0.12
SH3RF1-201ENST00000284637 SCGB1D2O95969 90 aa15.82■□□□□ 0.12
SH3RF1-201ENST00000284637 SOX2P48431 317 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms