RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 VMP1Q96GC9 406 aa8.3□□□□□ -1.08
TPM3-201ENST00000271850 SEC16BQ96JE7 1060 aa8.3□□□□□ -1.08
TPM3-201ENST00000271850 SCYL1Q96KG9 808 aa8.3□□□□□ -1.08
TPM3-201ENST00000271850 RASL10BQ96S79 203 aa8.3□□□□□ -1.08
TPM3-201ENST00000271850 AIF1LQ9BQI0 150 aa8.3□□□□□ -1.08
TPM3-201ENST00000271850 NAT9Q9BTE0 207 aa8.3□□□□□ -1.08
TPM3-201ENST00000271850 KRTAP4-8Q9BYQ9 185 aa8.3□□□□□ -1.08
TPM3-201ENST00000271850 TTTY12Q9BZ98 90 aa8.3□□□□□ -1.08
TPM3-201ENST00000271850 DEFB127Q9H1M4 99 aa8.3□□□□□ -1.08
TPM3-201ENST00000271850 KCNF1Q9H3M0 494 aa8.3□□□□□ -1.08
TPM3-201ENST00000271850 SH2D2AQ9NP31 389 aa8.3□□□□□ -1.08
TPM3-201ENST00000271850 SEMA4BQ9NPR2 832 aaPredicted RBP8.3□□□□□ -1.08
TPM3-201ENST00000271850 PRDM7Q9NQW5 492 aa8.3□□□□□ -1.08
TPM3-201ENST00000271850 PRTFDC1Q9NRG1 225 aa8.3□□□□□ -1.08
TPM3-201ENST00000271850 PNPLA3Q9NST1 481 aa8.3□□□□□ -1.08
TPM3-201ENST00000271850 CORO1CQ9ULV4 474 aaPredicted RBP8.3□□□□□ -1.08
TPM3-201ENST00000271850 DAPP1Q9UN19 280 aa8.3□□□□□ -1.08
TPM3-201ENST00000271850 DYRK1BQ9Y463 629 aa8.3□□□□□ -1.08
TPM3-201ENST00000271850 MAP1AP78559 2803 aaPredicted RBP8.3□□□□□ -1.08
TPM3-201ENST00000271850 PRRC2AP48634 2157 aaKnown RBP8.29□□□□□ -1.08
TPM3-201ENST00000271850 NCF1BA6NI72 391 aaPredicted RBP8.29□□□□□ -1.08
TPM3-201ENST00000271850 NCF1CA8MVU1 366 aaPredicted RBP8.29□□□□□ -1.08
TPM3-201ENST00000271850 CXorf49A8MYA2 514 aaPredicted RBP8.29□□□□□ -1.08
TPM3-201ENST00000271850 KDM4EB2RXH2 506 aaPredicted RBP8.29□□□□□ -1.08
TPM3-201ENST00000271850 E7ESA3 106 aa8.29□□□□□ -1.08
TPM3-201ENST00000271850 KLRC4-KLRK1H3BQV0 150 aa8.29□□□□□ -1.08
TPM3-201ENST00000271850 HRKO00198 91 aa8.29□□□□□ -1.08
TPM3-201ENST00000271850 WWP2O00308 870 aa8.29□□□□□ -1.08
TPM3-201ENST00000271850 RTCAO00442 366 aaKnown RBP8.29□□□□□ -1.08
TPM3-201ENST00000271850 CES2O00748 559 aa8.29□□□□□ -1.08
TPM3-201ENST00000271850 FCHO1O14526 889 aa8.29□□□□□ -1.08
TPM3-201ENST00000271850 SEC31AO94979 1220 aaKnown RBP8.29□□□□□ -1.08
TPM3-201ENST00000271850 NADKO95544 446 aaPredicted RBP8.29□□□□□ -1.08
TPM3-201ENST00000271850 ETHE1O95571 254 aa8.29□□□□□ -1.08
TPM3-201ENST00000271850 IGHG3P01860 377 aa8.29□□□□□ -1.08
TPM3-201ENST00000271850 NCF1P14598 390 aaPredicted RBP8.29□□□□□ -1.08
TPM3-201ENST00000271850 SAT1P21673 171 aa8.29□□□□□ -1.08
TPM3-201ENST00000271850 ADH7P40394 386 aa8.29□□□□□ -1.08
TPM3-201ENST00000271850 KCNC1P48547 511 aa8.29□□□□□ -1.08
TPM3-201ENST00000271850 SSR4P51571 173 aa8.29□□□□□ -1.08
TPM3-201ENST00000271850 PLA2G16P53816 162 aa8.29□□□□□ -1.08
TPM3-201ENST00000271850 DLX5P56178 289 aa8.29□□□□□ -1.08
TPM3-201ENST00000271850 HSD17B7P56937 341 aa8.29□□□□□ -1.08
TPM3-201ENST00000271850 PMPCAQ10713 525 aa8.29□□□□□ -1.08
TPM3-201ENST00000271850 E2F2Q14209 437 aa8.29□□□□□ -1.08
TPM3-201ENST00000271850 MORF4L2Q15014 288 aa8.29□□□□□ -1.08
TPM3-201ENST00000271850 TGFBIQ15582 683 aa8.29□□□□□ -1.08
TPM3-201ENST00000271850 OR4D1Q15615 310 aa8.29□□□□□ -1.08
TPM3-201ENST00000271850 NIPAL1Q6NVV3 410 aa8.29□□□□□ -1.08
TPM3-201ENST00000271850 ABHD17CQ6PCB6 329 aa8.29□□□□□ -1.08
TPM3-201ENST00000271850 IL20RBQ6UXL0 311 aa8.29□□□□□ -1.08
TPM3-201ENST00000271850 TMIGD1Q6UXZ0 262 aa8.29□□□□□ -1.08
TPM3-201ENST00000271850 DMRTC2Q8IXT2 367 aaPredicted RBP8.29□□□□□ -1.08
TPM3-201ENST00000271850 RNF175Q8N4F7 328 aa8.29□□□□□ -1.08
TPM3-201ENST00000271850 TMEM156Q8N614 296 aa8.29□□□□□ -1.08
TPM3-201ENST00000271850 TMEM251Q8N6I4 163 aa8.29□□□□□ -1.08
TPM3-201ENST00000271850 ANKRD7Q92527 254 aa8.29□□□□□ -1.08
TPM3-201ENST00000271850 TMEM125Q96AQ2 219 aa8.29□□□□□ -1.08
TPM3-201ENST00000271850 ANKRD9Q96BM1 317 aaPredicted RBP8.29□□□□□ -1.08
TPM3-201ENST00000271850 WDR34Q96EX3 536 aa8.29□□□□□ -1.08
TPM3-201ENST00000271850 NPLQ9BXD5 320 aaPredicted RBP8.29□□□□□ -1.08
TPM3-201ENST00000271850 CAB39LQ9H9S4 337 aa8.29□□□□□ -1.08
TPM3-201ENST00000271850 PROK2Q9HC23 129 aa8.29□□□□□ -1.08
TPM3-201ENST00000271850 ADAP2Q9NPF8 381 aa8.29□□□□□ -1.08
TPM3-201ENST00000271850 PPANQ9NQ55 473 aaKnown RBP8.29□□□□□ -1.08
TPM3-201ENST00000271850 TRMT1Q9NXH9 659 aaKnown RBP8.29□□□□□ -1.08
TPM3-201ENST00000271850 MYOTQ9UBF9 498 aa8.29□□□□□ -1.08
TPM3-201ENST00000271850 MTO1Q9Y2Z2 717 aaKnown RBP8.29□□□□□ -1.08
TPM3-201ENST00000271850 KCNE2Q9Y6J6 123 aa8.29□□□□□ -1.08
TPM3-201ENST00000271850 ANKHD1Q8IWZ3 2542 aaKnown RBP8.28□□□□□ -1.08
TPM3-201ENST00000271850 A0A1B0GVC2 190 aa8.28□□□□□ -1.08
TPM3-201ENST00000271850 URADA6NGE7 173 aa8.28□□□□□ -1.08
TPM3-201ENST00000271850 USP27XA6NNY8 438 aa8.28□□□□□ -1.08
TPM3-201ENST00000271850 GOLGA6L6A8MZA4 724 aa8.28□□□□□ -1.08
TPM3-201ENST00000271850 NPIPA2E9PIF3 369 aa8.28□□□□□ -1.08
TPM3-201ENST00000271850 NPIPA3F8WFD2 350 aa8.28□□□□□ -1.08
TPM3-201ENST00000271850 PSMD12O00232 456 aaPredicted RBP8.28□□□□□ -1.08
TPM3-201ENST00000271850 LDB3O75112 727 aa8.28□□□□□ -1.08
TPM3-201ENST00000271850 CLEC3AO75596 197 aa8.28□□□□□ -1.08
TPM3-201ENST00000271850 TUBB4AP04350 444 aa8.28□□□□□ -1.08
TPM3-201ENST00000271850 CCL3P10147 92 aa8.28□□□□□ -1.08
TPM3-201ENST00000271850 CD1DP15813 335 aa8.28□□□□□ -1.08
TPM3-201ENST00000271850 GNAZP19086 355 aa8.28□□□□□ -1.08
TPM3-201ENST00000271850 CAPN3P20807 821 aa8.28□□□□□ -1.08
TPM3-201ENST00000271850 CHRNB4P30926 498 aa8.28□□□□□ -1.08
TPM3-201ENST00000271850 GGT5P36269 586 aa8.28□□□□□ -1.08
TPM3-201ENST00000271850 MAGEA5P43359 124 aa8.28□□□□□ -1.08
TPM3-201ENST00000271850 HSPA7P48741 367 aa8.28□□□□□ -1.08
TPM3-201ENST00000271850 DNASE1L1P49184 302 aa8.28□□□□□ -1.08
TPM3-201ENST00000271850 PPIAP62937 165 aaKnown RBP8.28□□□□□ -1.08
TPM3-201ENST00000271850 SKP1P63208 163 aa8.28□□□□□ -1.08
TPM3-201ENST00000271850 MRPS25P82663 173 aaKnown RBP8.28□□□□□ -1.08
TPM3-201ENST00000271850 ID2Q02363 134 aa8.28□□□□□ -1.08
TPM3-201ENST00000271850 MGAT5Q09328 741 aa8.28□□□□□ -1.08
TPM3-201ENST00000271850 DLG1Q12959 904 aa8.28□□□□□ -1.08
TPM3-201ENST00000271850 SNTB1Q13884 538 aaKnown RBP8.28□□□□□ -1.08
TPM3-201ENST00000271850 DOC2AQ14183 400 aa8.28□□□□□ -1.08
TPM3-201ENST00000271850 ELAVL1Q15717 326 aaKnown RBP8.28□□□□□ -1.08
TPM3-201ENST00000271850 TUSC1Q2TAM9 212 aa8.28□□□□□ -1.08
TPM3-201ENST00000271850 GXYLT1Q4G148 440 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms