RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 LY6G6EA0A0G2JKS1 128 aa13.36□□□□□ -0.27
SS18-201ENST00000269137 FAM220BPB1ANY3 271 aa13.36□□□□□ -0.27
SS18-201ENST00000269137 SIGLEC6O43699 453 aa13.36□□□□□ -0.27
SS18-201ENST00000269137 AIFM1O95831 613 aa13.36□□□□□ -0.27
SS18-201ENST00000269137 ABCB1P08183 1280 aaPredicted RBP13.36□□□□□ -0.27
SS18-201ENST00000269137 ENGP17813 658 aa13.36□□□□□ -0.27
SS18-201ENST00000269137 ATP6V1B2P21281 511 aa13.36□□□□□ -0.27
SS18-201ENST00000269137 PPM1FP49593 454 aaPredicted RBP13.36□□□□□ -0.27
SS18-201ENST00000269137 ATXN3P54252 364 aaPredicted RBP13.36□□□□□ -0.27
SS18-201ENST00000269137 SNRPNP63162 240 aaKnown RBP13.36□□□□□ -0.27
SS18-201ENST00000269137 CFHR1Q03591 330 aa13.36□□□□□ -0.27
SS18-201ENST00000269137 SQSTM1Q13501 440 aa13.36□□□□□ -0.27
SS18-201ENST00000269137 MLC1Q15049 377 aa13.36□□□□□ -0.27
SS18-201ENST00000269137 DEFB134Q4QY38 66 aa13.36□□□□□ -0.27
SS18-201ENST00000269137 WDR74Q6RFH5 385 aaPredicted RBP13.36□□□□□ -0.27
SS18-201ENST00000269137 SPRED1Q7Z699 444 aa13.36□□□□□ -0.27
SS18-201ENST00000269137 SERPINA11Q86U17 422 aa13.36□□□□□ -0.27
SS18-201ENST00000269137 SPATA24Q86W54 205 aa13.36□□□□□ -0.27
SS18-201ENST00000269137 TRIML2Q8N7C3 387 aa13.36□□□□□ -0.27
SS18-201ENST00000269137 ZCCHC10Q8TBK6 192 aa13.36□□□□□ -0.27
SS18-201ENST00000269137 ZBED6CLQ96FA7 236 aaPredicted RBP13.36□□□□□ -0.27
SS18-201ENST00000269137 MAPKAP1Q9BPZ7 522 aa13.36□□□□□ -0.27
SS18-201ENST00000269137 TRIM4Q9C037 500 aa13.36□□□□□ -0.27
SS18-201ENST00000269137 LYRM4Q9HD34 91 aa13.36□□□□□ -0.27
SS18-201ENST00000269137 PDE7BQ9NP56 450 aa13.36□□□□□ -0.27
SS18-201ENST00000269137 SLC35C2Q9NQQ7 365 aa13.36□□□□□ -0.27
SS18-201ENST00000269137 DNAAF2Q9NVR5 837 aaKnown RBP13.36□□□□□ -0.27
SS18-201ENST00000269137 MAGEL2Q9UJ55 1249 aa13.36□□□□□ -0.27
SS18-201ENST00000269137 FBXW2Q9UKT8 454 aa13.36□□□□□ -0.27
SS18-201ENST00000269137 CES1P1Q9UKY3 287 aa13.36□□□□□ -0.27
SS18-201ENST00000269137 PLCL2Q9UPR0 1127 aa13.36□□□□□ -0.27
SS18-201ENST00000269137 CORO2BQ9UQ03 480 aa13.36□□□□□ -0.27
SS18-201ENST00000269137 U3KQA8 63 aa13.36□□□□□ -0.27
SS18-201ENST00000269137 H3BNX3 289 aa13.35□□□□□ -0.27
SS18-201ENST00000269137 PCDHGA12O60330 932 aa13.35□□□□□ -0.27
SS18-201ENST00000269137 MYF5P13349 255 aa13.35□□□□□ -0.27
SS18-201ENST00000269137 ANPEPP15144 967 aa13.35□□□□□ -0.27
SS18-201ENST00000269137 SLC34A1Q06495 639 aa13.35□□□□□ -0.27
SS18-201ENST00000269137 GAB1Q13480 694 aa13.35□□□□□ -0.27
SS18-201ENST00000269137 CYP2R1Q6VVX0 501 aa13.35□□□□□ -0.27
SS18-201ENST00000269137 Q8N9G6 341 aaPredicted RBP13.35□□□□□ -0.27
SS18-201ENST00000269137 PSMA8Q8TAA3 256 aa13.35□□□□□ -0.27
SS18-201ENST00000269137 KLHL6Q8WZ60 621 aa13.35□□□□□ -0.27
SS18-201ENST00000269137 CCDC74AQ96AQ1 378 aa13.35□□□□□ -0.27
SS18-201ENST00000269137 EXOSC8Q96B26 276 aaKnown RBP13.35□□□□□ -0.27
SS18-201ENST00000269137 FAM120BQ96EK7 910 aaKnown RBP13.35□□□□□ -0.27
SS18-201ENST00000269137 REXO5Q96IC2 774 aaKnown RBP13.35□□□□□ -0.27
SS18-201ENST00000269137 PIF1Q9H611 641 aa13.35□□□□□ -0.27
SS18-201ENST00000269137 NEUROD4Q9HD90 331 aa13.35□□□□□ -0.27
SS18-201ENST00000269137 SLAMF7Q9NQ25 335 aa13.35□□□□□ -0.27
SS18-201ENST00000269137 ENAMQ9NRM1 1142 aa13.35□□□□□ -0.27
SS18-201ENST00000269137 MS4A12Q9NXJ0 267 aa13.35□□□□□ -0.27
SS18-201ENST00000269137 C5AR2Q9P296 337 aa13.35□□□□□ -0.27
SS18-201ENST00000269137 UTS2RQ9UKP6 389 aa13.35□□□□□ -0.27
SS18-201ENST00000269137 ANGPTL2Q9UKU9 493 aa13.35□□□□□ -0.27
SS18-201ENST00000269137 USP22Q9UPT9 525 aa13.35□□□□□ -0.27
SS18-201ENST00000269137 MRPS2Q9Y399 296 aaKnown RBP13.35□□□□□ -0.27
SS18-201ENST00000269137 PCDHGA5Q9Y5G8 931 aa13.35□□□□□ -0.27
SS18-201ENST00000269137 VPS13AQ96RL7 3174 aa13.35□□□□□ -0.27
SS18-201ENST00000269137 SPTBP11277 2137 aa13.35□□□□□ -0.27
SS18-201ENST00000269137 ELOVL7A1L3X0 281 aa13.34□□□□□ -0.27
SS18-201ENST00000269137 PGRMC2O15173 223 aa13.34□□□□□ -0.27
SS18-201ENST00000269137 GALR3O60755 368 aaPredicted RBP13.34□□□□□ -0.27
SS18-201ENST00000269137 NR2F6P10588 404 aa13.34□□□□□ -0.27
SS18-201ENST00000269137 GGT1P19440 569 aa13.34□□□□□ -0.27
SS18-201ENST00000269137 GCKP35557 465 aa13.34□□□□□ -0.27
SS18-201ENST00000269137 MLLT3P42568 568 aaPredicted RBP13.34□□□□□ -0.27
SS18-201ENST00000269137 MANFP55145 182 aaKnown RBP13.34□□□□□ -0.27
SS18-201ENST00000269137 LIM2P55344 173 aa13.34□□□□□ -0.27
SS18-201ENST00000269137 MRPS22P82650 360 aaKnown RBP13.34□□□□□ -0.27
SS18-201ENST00000269137 RUNX2Q13950 521 aa13.34□□□□□ -0.27
SS18-201ENST00000269137 DEFB110Q30KQ9 67 aa13.34□□□□□ -0.27
SS18-201ENST00000269137 AMZ1Q400G9 498 aa13.34□□□□□ -0.27
SS18-201ENST00000269137 IRAK1BP1Q5VVH5 260 aa13.34□□□□□ -0.27
SS18-201ENST00000269137 C18orf63Q68DL7 685 aa13.34□□□□□ -0.27
SS18-201ENST00000269137 SLC48A1Q6P1K1 146 aa13.34□□□□□ -0.27
SS18-201ENST00000269137 ZNF551Q7Z340 670 aaPredicted RBP13.34□□□□□ -0.27
SS18-201ENST00000269137 PRSS42Q7Z5A4 293 aa13.34□□□□□ -0.27
SS18-201ENST00000269137 MICU2Q8IYU8 434 aa13.34□□□□□ -0.27
SS18-201ENST00000269137 DTWD1Q8N5C7 304 aa13.34□□□□□ -0.27
SS18-201ENST00000269137 UCN3Q969E3 161 aa13.34□□□□□ -0.27
SS18-201ENST00000269137 RSRC1Q96IZ7 334 aaKnown RBP13.34□□□□□ -0.27
SS18-201ENST00000269137 SPATA9Q9BWV2 254 aa13.34□□□□□ -0.27
SS18-201ENST00000269137 NPLQ9BXD5 320 aaPredicted RBP13.34□□□□□ -0.27
SS18-201ENST00000269137 GORASP2Q9H8Y8 452 aa13.34□□□□□ -0.27
SS18-201ENST00000269137 STOML1Q9UBI4 398 aa13.34□□□□□ -0.27
SS18-201ENST00000269137 PSME2Q9UL46 239 aa13.34□□□□□ -0.27
SS18-201ENST00000269137 DAPP1Q9UN19 280 aa13.34□□□□□ -0.27
SS18-201ENST00000269137 CACNA1HO95180 2353 aa13.34□□□□□ -0.27
SS18-201ENST00000269137 EME2A4GXA9 379 aaPredicted RBP13.34□□□□□ -0.27
SS18-201ENST00000269137 MYO1GB0I1T2 1018 aa13.34□□□□□ -0.27
SS18-201ENST00000269137 IL1RNP18510 177 aa13.34□□□□□ -0.27
SS18-201ENST00000269137 UQCRC2P22695 453 aa13.34□□□□□ -0.27
SS18-201ENST00000269137 CSF2RBP32927 897 aa13.34□□□□□ -0.27
SS18-201ENST00000269137 BUD31P41223 144 aaPredicted RBP13.34□□□□□ -0.27
SS18-201ENST00000269137 TNFRSF17Q02223 184 aa13.34□□□□□ -0.27
SS18-201ENST00000269137 SLC14A1Q13336 389 aa13.34□□□□□ -0.27
SS18-201ENST00000269137 CEBPEQ15744 281 aa13.34□□□□□ -0.27
SS18-201ENST00000269137 TCTE1Q5JU00 501 aa13.34□□□□□ -0.27
SS18-201ENST00000269137 GARNL3Q5VVW2 1013 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms