RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 HCRTR1O43613 425 aa15.5■□□□□ 0.07
TPM1-201ENST00000267996 CREG1O75629 220 aa15.5■□□□□ 0.07
TPM1-201ENST00000267996 ALOX12P18054 663 aa15.5■□□□□ 0.07
TPM1-201ENST00000267996 IL10P22301 178 aa15.5■□□□□ 0.07
TPM1-201ENST00000267996 UQCRC2P22695 453 aa15.5■□□□□ 0.07
TPM1-201ENST00000267996 NR1D2Q14995 579 aa15.5■□□□□ 0.07
TPM1-201ENST00000267996 TRIP10Q15642 601 aa15.5■□□□□ 0.07
TPM1-201ENST00000267996 VMACQ2NL98 169 aa15.5■□□□□ 0.07
TPM1-201ENST00000267996 IRGCQ6NXR0 463 aa15.5■□□□□ 0.07
TPM1-201ENST00000267996 ZCCHC8Q6NZY4 707 aaKnown RBP15.5■□□□□ 0.07
TPM1-201ENST00000267996 ABHD13Q7L211 337 aa15.5■□□□□ 0.07
TPM1-201ENST00000267996 KBTBD2Q8IY47 623 aa15.5■□□□□ 0.07
TPM1-201ENST00000267996 SLC35F3Q8IY50 421 aa15.5■□□□□ 0.07
TPM1-201ENST00000267996 CLEC4FQ8N1N0 589 aa15.5■□□□□ 0.07
TPM1-201ENST00000267996 ARHGEF39Q8N4T4 335 aa15.5■□□□□ 0.07
TPM1-201ENST00000267996 CSNK1A1LQ8N752 337 aa15.5■□□□□ 0.07
TPM1-201ENST00000267996 OR52N2Q8NGI0 321 aa15.5■□□□□ 0.07
TPM1-201ENST00000267996 FAM110BQ8TC76 370 aa15.5■□□□□ 0.07
TPM1-201ENST00000267996 KLHL6Q8WZ60 621 aa15.5■□□□□ 0.07
TPM1-201ENST00000267996 FIG4Q92562 907 aa15.5■□□□□ 0.07
TPM1-201ENST00000267996 POP5Q969H6 163 aaKnown RBP15.5■□□□□ 0.07
TPM1-201ENST00000267996 EXOSC8Q96B26 276 aaKnown RBP15.5■□□□□ 0.07
TPM1-201ENST00000267996 MAP3K3Q99759 626 aa15.5■□□□□ 0.07
TPM1-201ENST00000267996 MAPKAP1Q9BPZ7 522 aa15.5■□□□□ 0.07
TPM1-201ENST00000267996 CXorf36Q9H7Y0 433 aa15.5■□□□□ 0.07
TPM1-201ENST00000267996 IL21RQ9HBE5 538 aa15.5■□□□□ 0.07
TPM1-201ENST00000267996 NEUROD4Q9HD90 331 aa15.5■□□□□ 0.07
TPM1-201ENST00000267996 SIRT3Q9NTG7 399 aaPredicted RBP15.5■□□□□ 0.07
TPM1-201ENST00000267996 OLAHQ9NV23 265 aa15.5■□□□□ 0.07
TPM1-201ENST00000267996 LRIT1Q9P2V4 623 aa15.5■□□□□ 0.07
TPM1-201ENST00000267996 A0A1B0GTQ1 180 aa15.49■□□□□ 0.07
TPM1-201ENST00000267996 MYO1GB0I1T2 1018 aa15.49■□□□□ 0.07
TPM1-201ENST00000267996 PGRMC2O15173 223 aa15.49■□□□□ 0.07
TPM1-201ENST00000267996 IL1RNP18510 177 aa15.49■□□□□ 0.07
TPM1-201ENST00000267996 PEX2P28328 305 aa15.49■□□□□ 0.07
TPM1-201ENST00000267996 EPHA8P29322 1005 aaPredicted RBP15.49■□□□□ 0.07
TPM1-201ENST00000267996 MANFP55145 182 aaKnown RBP15.49■□□□□ 0.07
TPM1-201ENST00000267996 VAC14Q08AM6 782 aa15.49■□□□□ 0.07
TPM1-201ENST00000267996 ZC3H12BQ5HYM0 836 aaKnown RBP15.49■□□□□ 0.07
TPM1-201ENST00000267996 TBCELQ5QJ74 424 aa15.49■□□□□ 0.07
TPM1-201ENST00000267996 LPCAT4Q643R3 524 aa15.49■□□□□ 0.07
TPM1-201ENST00000267996 C18orf63Q68DL7 685 aa15.49■□□□□ 0.07
TPM1-201ENST00000267996 SLC48A1Q6P1K1 146 aa15.49■□□□□ 0.07
TPM1-201ENST00000267996 ERMP1Q7Z2K6 904 aa15.49■□□□□ 0.07
TPM1-201ENST00000267996 MCATQ8IVS2 390 aaKnown RBP15.49■□□□□ 0.07
TPM1-201ENST00000267996 ZCCHC10Q8TBK6 192 aa15.49■□□□□ 0.07
TPM1-201ENST00000267996 PNPT1Q8TCS8 783 aaKnown RBP15.49■□□□□ 0.07
TPM1-201ENST00000267996 LRTOMTQ8WZ04 291 aa15.49■□□□□ 0.07
TPM1-201ENST00000267996 TCTN2Q96GX1 697 aa15.49■□□□□ 0.07
TPM1-201ENST00000267996 ZNF285Q96NJ3 590 aa15.49■□□□□ 0.07
TPM1-201ENST00000267996 CD180Q99467 661 aa15.49■□□□□ 0.07
TPM1-201ENST00000267996 VCX3BQ9H321 246 aa15.49■□□□□ 0.07
TPM1-201ENST00000267996 EPB41L1Q9H4G0 881 aa15.49■□□□□ 0.07
TPM1-201ENST00000267996 PRDM9Q9NQV7 894 aa15.49■□□□□ 0.07
TPM1-201ENST00000267996 DCAF13Q9NV06 445 aaKnown RBP15.49■□□□□ 0.07
TPM1-201ENST00000267996 PHF11Q9UIL8 331 aa15.49■□□□□ 0.07
TPM1-201ENST00000267996 UTS2RQ9UKP6 389 aa15.49■□□□□ 0.07
TPM1-201ENST00000267996 FBXW2Q9UKT8 454 aa15.49■□□□□ 0.07
TPM1-201ENST00000267996 AURKCQ9UQB9 309 aa15.49■□□□□ 0.07
TPM1-201ENST00000267996 MRPS2Q9Y399 296 aaKnown RBP15.49■□□□□ 0.07
TPM1-201ENST00000267996 SLC22A7Q9Y694 548 aa15.49■□□□□ 0.07
TPM1-201ENST00000267996 TLCD2A6NGC4 264 aa15.48■□□□□ 0.07
TPM1-201ENST00000267996 WASHC1A8K0Z3 465 aa15.48■□□□□ 0.07
TPM1-201ENST00000267996 SRPX2O60687 465 aaPredicted RBP15.48■□□□□ 0.07
TPM1-201ENST00000267996 TNFRSF21O75509 655 aa15.48■□□□□ 0.07
TPM1-201ENST00000267996 PRKRAO75569 313 aaKnown RBP15.48■□□□□ 0.07
TPM1-201ENST00000267996 NTRK1P04629 796 aa15.48■□□□□ 0.07
TPM1-201ENST00000267996 GLB1P16278 677 aa15.48■□□□□ 0.07
TPM1-201ENST00000267996 ZNF10P21506 573 aaPredicted RBP15.48■□□□□ 0.07
TPM1-201ENST00000267996 CNR2P34972 360 aa15.48■□□□□ 0.07
TPM1-201ENST00000267996 GPR3P46089 330 aa15.48■□□□□ 0.07
TPM1-201ENST00000267996 GABRA4P48169 554 aa15.48■□□□□ 0.07
TPM1-201ENST00000267996 VSX2P58304 361 aaPredicted RBP15.48■□□□□ 0.07
TPM1-201ENST00000267996 FADDQ13158 208 aa15.48■□□□□ 0.07
TPM1-201ENST00000267996 RUNX2Q13950 521 aa15.48■□□□□ 0.07
TPM1-201ENST00000267996 VEZF1Q14119 521 aa15.48■□□□□ 0.07
TPM1-201ENST00000267996 CEBPEQ15744 281 aa15.48■□□□□ 0.07
TPM1-201ENST00000267996 PRTGQ2VWP7 1150 aa15.48■□□□□ 0.07
TPM1-201ENST00000267996 DEFB134Q4QY38 66 aa15.48■□□□□ 0.07
TPM1-201ENST00000267996 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.48■□□□□ 0.07
TPM1-201ENST00000267996 HMBOX1Q6NT76 420 aa15.48■□□□□ 0.07
TPM1-201ENST00000267996 FAM180BQ6P0A1 224 aa15.48■□□□□ 0.07
TPM1-201ENST00000267996 ADCY4Q8NFM4 1077 aa15.48■□□□□ 0.07
TPM1-201ENST00000267996 NETO1Q8TDF5 533 aa15.48■□□□□ 0.07
TPM1-201ENST00000267996 AMDHD1Q96NU7 426 aa15.48■□□□□ 0.07
TPM1-201ENST00000267996 KLHL4Q9C0H6 718 aa15.48■□□□□ 0.07
TPM1-201ENST00000267996 GLIPR2Q9H4G4 154 aa15.48■□□□□ 0.07
TPM1-201ENST00000267996 RAD21L1Q9H4I0 556 aa15.48■□□□□ 0.07
TPM1-201ENST00000267996 LYRM4Q9HD34 91 aa15.48■□□□□ 0.07
TPM1-201ENST00000267996 BDP1A6H8Y1 2624 aa15.48■□□□□ 0.07
TPM1-201ENST00000267996 IGHV1OR21-1A0A087WYE8 117 aa15.48■□□□□ 0.07
TPM1-201ENST00000267996 B3GALT2O43825 422 aa15.48■□□□□ 0.07
TPM1-201ENST00000267996 TIPRLO75663 272 aa15.48■□□□□ 0.07
TPM1-201ENST00000267996 KRT75O95678 551 aa15.48■□□□□ 0.07
TPM1-201ENST00000267996 EIF2S1P05198 315 aaKnown RBP15.48■□□□□ 0.07
TPM1-201ENST00000267996 NR2F6P10588 404 aa15.48■□□□□ 0.07
TPM1-201ENST00000267996 BMP2P12643 396 aa15.48■□□□□ 0.07
TPM1-201ENST00000267996 HOXD12P35452 270 aa15.48■□□□□ 0.07
TPM1-201ENST00000267996 GFERP55789 205 aa15.48■□□□□ 0.07
TPM1-201ENST00000267996 C16orf72Q14CZ0 275 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms