RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 C1orf189Q5VU69 101 aa13.8□□□□□ -0.2
PDLIM2-201ENST00000265810 OR52E8Q6IFG1 317 aa13.8□□□□□ -0.2
PDLIM2-201ENST00000265810 NLRP8Q86W28 1048 aa13.8□□□□□ -0.2
PDLIM2-201ENST00000265810 SVOPLQ8N434 492 aa13.8□□□□□ -0.2
PDLIM2-201ENST00000265810 NUP43Q8NFH3 380 aa13.8□□□□□ -0.2
PDLIM2-201ENST00000265810 SLC38A2Q96QD8 506 aa13.8□□□□□ -0.2
PDLIM2-201ENST00000265810 ZNF347Q96SE7 839 aa13.8□□□□□ -0.2
PDLIM2-201ENST00000265810 CMTM6Q9NX76 183 aa13.8□□□□□ -0.2
PDLIM2-201ENST00000265810 WBP11Q9Y2W2 641 aaKnown RBP13.8□□□□□ -0.2
PDLIM2-201ENST00000265810 MAU2Q9Y6X3 613 aa13.8□□□□□ -0.2
PDLIM2-201ENST00000265810 THSD7BQ9C0I4 1608 aa13.8□□□□□ -0.2
PDLIM2-201ENST00000265810 GABRR3A8MPY1 467 aa13.8□□□□□ -0.2
PDLIM2-201ENST00000265810 NME6O75414 186 aaPredicted RBP13.8□□□□□ -0.2
PDLIM2-201ENST00000265810 CCNA2P20248 432 aa13.8□□□□□ -0.2
PDLIM2-201ENST00000265810 SERPINB10P48595 397 aa13.8□□□□□ -0.2
PDLIM2-201ENST00000265810 OR2T5Q6IEZ7 315 aa13.8□□□□□ -0.2
PDLIM2-201ENST00000265810 LRRC25Q8N386 305 aaPredicted RBP13.8□□□□□ -0.2
PDLIM2-201ENST00000265810 SVOPQ8N4V2 548 aa13.8□□□□□ -0.2
PDLIM2-201ENST00000265810 OR2T29Q8NH02 315 aa13.8□□□□□ -0.2
PDLIM2-201ENST00000265810 PATE1Q8WXA2 126 aa13.8□□□□□ -0.2
PDLIM2-201ENST00000265810 NMD3Q96D46 503 aaKnown RBP13.8□□□□□ -0.2
PDLIM2-201ENST00000265810 CXorf56Q9H5V9 222 aa13.8□□□□□ -0.2
PDLIM2-201ENST00000265810 CLN6Q9NWW5 311 aa13.8□□□□□ -0.2
PDLIM2-201ENST00000265810 NCDNQ9UBB6 729 aa13.8□□□□□ -0.2
PDLIM2-201ENST00000265810 WDR45Q9Y484 360 aa13.8□□□□□ -0.2
PDLIM2-201ENST00000265810 PCDHB3Q9Y5E6 796 aa13.8□□□□□ -0.2
PDLIM2-201ENST00000265810 CEACAM5P06731 702 aa13.8□□□□□ -0.2
PDLIM2-201ENST00000265810 ETFAP13804 333 aa13.8□□□□□ -0.2
PDLIM2-201ENST00000265810 GALNT10Q86SR1 603 aa13.8□□□□□ -0.2
PDLIM2-201ENST00000265810 SPEM1Q8N4L4 309 aa13.8□□□□□ -0.2
PDLIM2-201ENST00000265810 OR2L3Q8NG85 312 aa13.8□□□□□ -0.2
PDLIM2-201ENST00000265810 OR5K1Q8NHB7 308 aa13.8□□□□□ -0.2
PDLIM2-201ENST00000265810 GEMIN6Q8WXD5 167 aaKnown RBP13.8□□□□□ -0.2
PDLIM2-201ENST00000265810 EDAQ92838 391 aa13.8□□□□□ -0.2
PDLIM2-201ENST00000265810 Q9N2J8 555 aa13.8□□□□□ -0.2
PDLIM2-201ENST00000265810 GTF2A1LQ9UNN4 478 aa13.8□□□□□ -0.2
PDLIM2-201ENST00000265810 CHURC1-FNTBB4DL54 471 aa13.79□□□□□ -0.2
PDLIM2-201ENST00000265810 KDELR2P33947 212 aa13.79□□□□□ -0.2
PDLIM2-201ENST00000265810 OR1E2P47887 323 aa13.79□□□□□ -0.2
PDLIM2-201ENST00000265810 FNTBP49356 437 aa13.79□□□□□ -0.2
PDLIM2-201ENST00000265810 MAPK10P53779 464 aa13.79□□□□□ -0.2
PDLIM2-201ENST00000265810 MS4A2Q01362 244 aa13.79□□□□□ -0.2
PDLIM2-201ENST00000265810 CCNIQ14094 377 aa13.79□□□□□ -0.2
PDLIM2-201ENST00000265810 NIPAL1Q6NVV3 410 aa13.79□□□□□ -0.2
PDLIM2-201ENST00000265810 PTCHD4Q6ZW05 846 aa13.79□□□□□ -0.2
PDLIM2-201ENST00000265810 IKBIPQ70UQ0 350 aa13.79□□□□□ -0.2
PDLIM2-201ENST00000265810 SYT13Q7L8C5 426 aa13.79□□□□□ -0.2
PDLIM2-201ENST00000265810 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.79□□□□□ -0.2
PDLIM2-201ENST00000265810 ADI1Q9BV57 179 aa13.79□□□□□ -0.2
PDLIM2-201ENST00000265810 RAB26Q9ULW5 256 aa13.79□□□□□ -0.2
PDLIM2-201ENST00000265810 BCKDKO14874 412 aa13.79□□□□□ -0.2
PDLIM2-201ENST00000265810 ERMP1Q7Z2K6 904 aa13.79□□□□□ -0.2
PDLIM2-201ENST00000265810 RELTQ969Z4 430 aa13.79□□□□□ -0.2
PDLIM2-201ENST00000265810 TNFRSF12AQ9NP84 129 aa13.79□□□□□ -0.2
PDLIM2-201ENST00000265810 NRG2O14511 850 aaPredicted RBP13.79□□□□□ -0.2
PDLIM2-201ENST00000265810 MGAMO43451 1857 aa13.79□□□□□ -0.2
PDLIM2-201ENST00000265810 PIM1P11309 404 aaPredicted RBP13.79□□□□□ -0.2
PDLIM2-201ENST00000265810 MYL12AP19105 171 aa13.79□□□□□ -0.2
PDLIM2-201ENST00000265810 FADDQ13158 208 aa13.79□□□□□ -0.2
PDLIM2-201ENST00000265810 CLCA4Q14CN2 919 aa13.79□□□□□ -0.2
PDLIM2-201ENST00000265810 TCTE1Q5JU00 501 aa13.79□□□□□ -0.2
PDLIM2-201ENST00000265810 HMGN2P46Q86SG4 172 aa13.79□□□□□ -0.2
PDLIM2-201ENST00000265810 UBALD2Q8IYN6 164 aa13.79□□□□□ -0.2
PDLIM2-201ENST00000265810 FAM81AQ8TBF8 368 aa13.79□□□□□ -0.2
PDLIM2-201ENST00000265810 SLC37A2Q8TED4 501 aa13.79□□□□□ -0.2
PDLIM2-201ENST00000265810 DACT3Q96B18 629 aaPredicted RBP13.79□□□□□ -0.2
PDLIM2-201ENST00000265810 MTERF3Q96E29 417 aa13.79□□□□□ -0.2
PDLIM2-201ENST00000265810 PITHD1Q9GZP4 211 aaPredicted RBP13.79□□□□□ -0.2
PDLIM2-201ENST00000265810 SLAMF8Q9P0V8 285 aa13.79□□□□□ -0.2
PDLIM2-201ENST00000265810 GPR37L1O60883 481 aa13.78□□□□□ -0.2
PDLIM2-201ENST00000265810 PORP16435 677 aaPredicted RBP13.78□□□□□ -0.2
PDLIM2-201ENST00000265810 UGT2B7P16662 529 aa13.78□□□□□ -0.2
PDLIM2-201ENST00000265810 CLVS1Q8IUQ0 354 aaPredicted RBP13.78□□□□□ -0.2
PDLIM2-201ENST00000265810 MCATQ8IVS2 390 aaKnown RBP13.78□□□□□ -0.2
PDLIM2-201ENST00000265810 MIEF2Q96C03 454 aa13.78□□□□□ -0.2
PDLIM2-201ENST00000265810 TEX101Q9BY14 249 aa13.78□□□□□ -0.2
PDLIM2-201ENST00000265810 A0A0A6YYC8 382 aaPredicted RBP13.78□□□□□ -0.2
PDLIM2-201ENST00000265810 I3L1I5 382 aaPredicted RBP13.78□□□□□ -0.2
PDLIM2-201ENST00000265810 EMC8O43402 210 aa13.78□□□□□ -0.2
PDLIM2-201ENST00000265810 UGT2B11O75310 529 aa13.78□□□□□ -0.2
PDLIM2-201ENST00000265810 SEMA3DO95025 777 aa13.78□□□□□ -0.2
PDLIM2-201ENST00000265810 FHP07954 510 aa13.78□□□□□ -0.2
PDLIM2-201ENST00000265810 JMJD7P0C870 316 aa13.78□□□□□ -0.2
PDLIM2-201ENST00000265810 GSTM5P46439 218 aa13.78□□□□□ -0.2
PDLIM2-201ENST00000265810 TOP3AQ13472 1001 aaPredicted RBP13.78□□□□□ -0.2
PDLIM2-201ENST00000265810 NCF4Q15080 339 aa13.78□□□□□ -0.2
PDLIM2-201ENST00000265810 ALG11Q2TAA5 492 aa13.78□□□□□ -0.2
PDLIM2-201ENST00000265810 TSSK4Q6SA08 328 aa13.78□□□□□ -0.2
PDLIM2-201ENST00000265810 TRIM46Q7Z4K8 759 aa13.78□□□□□ -0.2
PDLIM2-201ENST00000265810 MAL2Q969L2 176 aa13.78□□□□□ -0.2
PDLIM2-201ENST00000265810 BTBD9Q96Q07 612 aa13.78□□□□□ -0.2
PDLIM2-201ENST00000265810 NFKBIL1Q9UBC1 381 aaPredicted RBP13.78□□□□□ -0.2
PDLIM2-201ENST00000265810 ZFR2Q9UPR6 939 aaKnown RBP13.78□□□□□ -0.2
PDLIM2-201ENST00000265810 GNB5O14775 395 aa13.78□□□□□ -0.2
PDLIM2-201ENST00000265810 PTGER1P34995 402 aa13.78□□□□□ -0.2
PDLIM2-201ENST00000265810 SLC19A1P41440 591 aa13.78□□□□□ -0.2
PDLIM2-201ENST00000265810 LAPTM4AQ15012 233 aa13.78□□□□□ -0.2
PDLIM2-201ENST00000265810 METTL2AQ96IZ6 378 aaKnown RBP13.78□□□□□ -0.2
PDLIM2-201ENST00000265810 GPATCH1Q9BRR8 931 aaKnown RBP13.78□□□□□ -0.2
PDLIM2-201ENST00000265810 OR52A5Q9H2C5 316 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms