RNA–Protein interactions for RNA: ENST00000265689.8

CHKA-201, Transcript of choline kinase alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHKA, Length 2,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-201ENST00000265689 CDK9P50750 372 aaKnown RBP16.05■□□□□ 0.16
CHKA-201ENST00000265689 ISL1P61371 349 aa16.05■□□□□ 0.16
CHKA-201ENST00000265689 GRSF1Q12849 480 aaKnown RBP eCLIP16.05■□□□□ 0.16
CHKA-201ENST00000265689 HSPB3Q12988 150 aa16.05■□□□□ 0.16
CHKA-201ENST00000265689 NEDD8Q15843 81 aa16.05■□□□□ 0.16
CHKA-201ENST00000265689 ZC3H12BQ5HYM0 836 aaKnown RBP16.05■□□□□ 0.16
CHKA-201ENST00000265689 CCL4L1Q8NHW4 92 aa16.05■□□□□ 0.16
CHKA-201ENST00000265689 TSACCQ96A04 125 aaPredicted RBP16.05■□□□□ 0.16
CHKA-201ENST00000265689 DPH7Q9BTV6 452 aa16.05■□□□□ 0.16
CHKA-201ENST00000265689 RUBCNLQ9H714 662 aa16.05■□□□□ 0.16
CHKA-201ENST00000265689 LIN28AQ9H9Z2 209 aaKnown RBP16.05■□□□□ 0.16
CHKA-201ENST00000265689 VCX3AQ9NNX9 186 aa16.05■□□□□ 0.16
CHKA-201ENST00000265689 SCML1Q9UN30 329 aa16.05■□□□□ 0.16
CHKA-201ENST00000265689 WASHC1A8K0Z3 465 aa16.04■□□□□ 0.16
CHKA-201ENST00000265689 ARAFP10398 606 aa16.04■□□□□ 0.16
CHKA-201ENST00000265689 NDUFV2P19404 249 aa16.04■□□□□ 0.16
CHKA-201ENST00000265689 SSR2P43308 183 aa16.04■□□□□ 0.16
CHKA-201ENST00000265689 RAPSNQ13702 412 aa16.04■□□□□ 0.16
CHKA-201ENST00000265689 RBM48Q5RL73 367 aaKnown RBP16.04■□□□□ 0.16
CHKA-201ENST00000265689 ZNF773Q6PK81 442 aa16.04■□□□□ 0.16
CHKA-201ENST00000265689 WASH2PQ6VEQ5 465 aa16.04■□□□□ 0.16
CHKA-201ENST00000265689 ZNF793Q6ZN11 406 aa16.04■□□□□ 0.16
CHKA-201ENST00000265689 CLVS1Q8IUQ0 354 aaPredicted RBP16.04■□□□□ 0.16
CHKA-201ENST00000265689 OR2L3Q8NG85 312 aa16.04■□□□□ 0.16
CHKA-201ENST00000265689 OR5P2Q8WZ92 322 aa16.04■□□□□ 0.16
CHKA-201ENST00000265689 HDAC2Q92769 488 aaKnown RBP16.04■□□□□ 0.16
CHKA-201ENST00000265689 NECTIN4Q96NY8 510 aa16.04■□□□□ 0.16
CHKA-201ENST00000265689 DDX31Q9H8H2 851 aaKnown RBP16.04■□□□□ 0.16
CHKA-201ENST00000265689 NDUFAF4Q9P032 175 aa16.04■□□□□ 0.16
CHKA-201ENST00000265689 PADI2Q9Y2J8 665 aa16.04■□□□□ 0.16
CHKA-201ENST00000265689 TRBV23OR9-2A0A075B6M9 112 aa16.04■□□□□ 0.16
CHKA-201ENST00000265689 PRAMEF25A6NGN4 478 aa16.04■□□□□ 0.16
CHKA-201ENST00000265689 C4orf51C9J302 202 aa16.04■□□□□ 0.16
CHKA-201ENST00000265689 TBX19O60806 448 aa16.04■□□□□ 0.16
CHKA-201ENST00000265689 ITGAMP11215 1152 aa16.04■□□□□ 0.16
CHKA-201ENST00000265689 RRM2P31350 389 aa16.04■□□□□ 0.16
CHKA-201ENST00000265689 RPS6KA3P51812 740 aa16.04■□□□□ 0.16
CHKA-201ENST00000265689 DYNC1I2Q13409 638 aaKnown RBP16.04■□□□□ 0.16
CHKA-201ENST00000265689 ZNF630Q2M218 657 aaPredicted RBP16.04■□□□□ 0.16
CHKA-201ENST00000265689 USP30Q70CQ3 517 aa16.04■□□□□ 0.16
CHKA-201ENST00000265689 OR4E2Q8NGC2 313 aa16.04■□□□□ 0.16
CHKA-201ENST00000265689 BMFQ96LC9 184 aa16.04■□□□□ 0.16
CHKA-201ENST00000265689 RAD21L1Q9H4I0 556 aa16.04■□□□□ 0.16
CHKA-201ENST00000265689 SYNPO2LQ9H987 977 aa16.04■□□□□ 0.16
CHKA-201ENST00000265689 DDX18Q9NVP1 670 aaKnown RBP16.04■□□□□ 0.16
CHKA-201ENST00000265689 PNMA8BQ9ULN7 279 aaPredicted RBP16.04■□□□□ 0.16
CHKA-201ENST00000265689 WBP11Q9Y2W2 641 aaKnown RBP16.04■□□□□ 0.16
CHKA-201ENST00000265689 TESMINQ9Y4I5 508 aa16.04■□□□□ 0.16
CHKA-201ENST00000265689 AP1M2Q9Y6Q5 423 aa16.04■□□□□ 0.16
CHKA-201ENST00000265689 A0A0A6YYD5 115 aa16.03■□□□□ 0.16
CHKA-201ENST00000265689 B4GALT2O60909 372 aa16.03■□□□□ 0.16
CHKA-201ENST00000265689 PRKRAO75569 313 aaKnown RBP16.03■□□□□ 0.16
CHKA-201ENST00000265689 DRD1P21728 446 aa16.03■□□□□ 0.16
CHKA-201ENST00000265689 CLK3P49761 638 aaKnown RBP16.03■□□□□ 0.16
CHKA-201ENST00000265689 PCBP4P57723 403 aaKnown RBP16.03■□□□□ 0.16
CHKA-201ENST00000265689 KIAA1024LP59773 190 aa16.03■□□□□ 0.16
CHKA-201ENST00000265689 DSTNP60981 165 aa16.03■□□□□ 0.16
CHKA-201ENST00000265689 LRRC32Q14392 662 aa16.03■□□□□ 0.16
CHKA-201ENST00000265689 RAB39AQ14964 217 aa16.03■□□□□ 0.16
CHKA-201ENST00000265689 TNFAIP8L2Q6P589 184 aaPredicted RBP16.03■□□□□ 0.16
CHKA-201ENST00000265689 CCDC80Q76M96 950 aa16.03■□□□□ 0.16
CHKA-201ENST00000265689 HORMAD2Q8N7B1 307 aa16.03■□□□□ 0.16
CHKA-201ENST00000265689 ATG16L2Q8NAA4 619 aa16.03■□□□□ 0.16
CHKA-201ENST00000265689 NRBF2Q96F24 287 aa16.03■□□□□ 0.16
CHKA-201ENST00000265689 TMEM184CQ9NVA4 438 aa16.03■□□□□ 0.16
CHKA-201ENST00000265689 KIF17Q9P2E2 1029 aa16.03■□□□□ 0.16
CHKA-201ENST00000265689 CA14Q9ULX7 337 aa16.03■□□□□ 0.16
CHKA-201ENST00000265689 C9P02748 559 aa16.03■□□□□ 0.16
CHKA-201ENST00000265689 EPHA2P29317 976 aa16.03■□□□□ 0.16
CHKA-201ENST00000265689 PIGFQ07326 219 aa16.03■□□□□ 0.16
CHKA-201ENST00000265689 HYAL2Q12891 473 aa16.03■□□□□ 0.16
CHKA-201ENST00000265689 NFATC4Q14934 902 aa16.03■□□□□ 0.16
CHKA-201ENST00000265689 ZIC1Q15915 447 aa16.03■□□□□ 0.16
CHKA-201ENST00000265689 IFI44LQ53G44 452 aa16.03■□□□□ 0.16
CHKA-201ENST00000265689 KIAA1614Q5VZ46 1190 aa16.03■□□□□ 0.16
CHKA-201ENST00000265689 SAXO2Q658L1 398 aa16.03■□□□□ 0.16
CHKA-201ENST00000265689 CEACAM20Q6UY09 585 aa16.03■□□□□ 0.16
CHKA-201ENST00000265689 SMYD1Q8NB12 490 aa16.03■□□□□ 0.16
CHKA-201ENST00000265689 CNIH3Q8TBE1 160 aa16.03■□□□□ 0.16
CHKA-201ENST00000265689 ASB12Q8WXK4 309 aa16.03■□□□□ 0.16
CHKA-201ENST00000265689 CXorf21Q9HAI6 301 aa16.03■□□□□ 0.16
CHKA-201ENST00000265689 SIRT3Q9NTG7 399 aaPredicted RBP16.03■□□□□ 0.16
CHKA-201ENST00000265689 AASSQ9UDR5 926 aa16.03■□□□□ 0.16
CHKA-201ENST00000265689 EBF1Q9UH73 591 aa16.03■□□□□ 0.16
CHKA-201ENST00000265689 ADAM29Q9UKF5 820 aa16.03■□□□□ 0.16
CHKA-201ENST00000265689 RAB23Q9ULC3 237 aa16.03■□□□□ 0.16
CHKA-201ENST00000265689 CDC14AQ9UNH5 594 aa16.03■□□□□ 0.16
CHKA-201ENST00000265689 ZNF451Q9Y4E5 1061 aa16.03■□□□□ 0.16
CHKA-201ENST00000265689 GRK3P35626 688 aa16.02■□□□□ 0.16
CHKA-201ENST00000265689 TPMTP51580 245 aa16.02■□□□□ 0.16
CHKA-201ENST00000265689 MRPS21P82921 87 aaKnown RBP16.02■□□□□ 0.16
CHKA-201ENST00000265689 IL5RAQ01344 420 aa16.02■□□□□ 0.16
CHKA-201ENST00000265689 CRB2Q5IJ48 1285 aa16.02■□□□□ 0.16
CHKA-201ENST00000265689 TTLQ8NG68 377 aa16.02■□□□□ 0.16
CHKA-201ENST00000265689 NEURL3Q96EH8 262 aa16.02■□□□□ 0.16
CHKA-201ENST00000265689 GUCD1Q96NT3 240 aa16.02■□□□□ 0.16
CHKA-201ENST00000265689 KIR3DX1Q9H7L2 352 aa16.02■□□□□ 0.16
CHKA-201ENST00000265689 SNRNP200O75643 2136 aaKnown RBP16.02■□□□□ 0.16
CHKA-201ENST00000265689 GLOD5A6NK44 160 aa16.02■□□□□ 0.15
CHKA-201ENST00000265689 ISM1B1AKI9 464 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms