RNA–Protein interactions for RNA: ENST00000264709.7

DNMT3A-201, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 9,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-201ENST00000264709 SCG5P05408 212 aa11.24□□□□□ -0.61
DNMT3A-201ENST00000264709 MMP3P08254 477 aa11.24□□□□□ -0.61
DNMT3A-201ENST00000264709 SLC35A2P78381 396 aa11.24□□□□□ -0.61
DNMT3A-201ENST00000264709 CPZQ66K79 652 aa11.24□□□□□ -0.61
DNMT3A-201ENST00000264709 LRRC56Q8IYG6 542 aaPredicted RBP11.24□□□□□ -0.61
DNMT3A-201ENST00000264709 YIPF7Q8N8F6 280 aa11.24□□□□□ -0.61
DNMT3A-201ENST00000264709 PSKH2Q96QS6 385 aa11.24□□□□□ -0.61
DNMT3A-201ENST00000264709 CCM2Q9BSQ5 444 aa11.24□□□□□ -0.61
DNMT3A-201ENST00000264709 ARL6Q9H0F7 186 aa11.24□□□□□ -0.61
DNMT3A-201ENST00000264709 NDUFAF4Q9P032 175 aa11.24□□□□□ -0.61
DNMT3A-201ENST00000264709 ZNF195O14628 629 aa11.24□□□□□ -0.61
DNMT3A-201ENST00000264709 CA12O43570 354 aa11.24□□□□□ -0.61
DNMT3A-201ENST00000264709 ELFN1P0C7U0 828 aa11.24□□□□□ -0.61
DNMT3A-201ENST00000264709 GABRA5P31644 462 aa11.24□□□□□ -0.61
DNMT3A-201ENST00000264709 E2F1Q01094 437 aa11.24□□□□□ -0.61
DNMT3A-201ENST00000264709 PLEKHS1Q5SXH7 462 aa11.24□□□□□ -0.61
DNMT3A-201ENST00000264709 CEACAM20Q6UY09 585 aa11.24□□□□□ -0.61
DNMT3A-201ENST00000264709 WDR53Q7Z5U6 358 aaPredicted RBP11.24□□□□□ -0.61
DNMT3A-201ENST00000264709 ZNF285Q96NJ3 590 aa11.24□□□□□ -0.61
DNMT3A-201ENST00000264709 MINDY3Q9H8M7 445 aa11.24□□□□□ -0.61
DNMT3A-201ENST00000264709 TMEM39AQ9NV64 488 aa11.24□□□□□ -0.61
DNMT3A-201ENST00000264709 MGAT4AQ9UM21 535 aa11.24□□□□□ -0.61
DNMT3A-201ENST00000264709 ANKRD28O15084 1053 aa11.24□□□□□ -0.61
DNMT3A-201ENST00000264709 SNAPINO95295 136 aa11.24□□□□□ -0.61
DNMT3A-201ENST00000264709 CKMT1AP12532 417 aa11.24□□□□□ -0.61
DNMT3A-201ENST00000264709 PRMT2P55345 433 aa11.24□□□□□ -0.61
DNMT3A-201ENST00000264709 PROKR1Q8TCW9 393 aa11.24□□□□□ -0.61
DNMT3A-201ENST00000264709 EBPLQ9BY08 206 aa11.24□□□□□ -0.61
DNMT3A-201ENST00000264709 GLIS2Q9BZE0 524 aaPredicted RBP11.23□□□□□ -0.61
DNMT3A-201ENST00000264709 DUS2Q9NX74 493 aaKnown RBP11.23□□□□□ -0.61
DNMT3A-201ENST00000264709 SPG21Q9NZD8 308 aa11.23□□□□□ -0.61
DNMT3A-201ENST00000264709 MALT1Q9UDY8 824 aa11.23□□□□□ -0.61
DNMT3A-201ENST00000264709 GVINP1Q7Z2Y8 2422 aa11.23□□□□□ -0.61
DNMT3A-201ENST00000264709 A8MVJ9 347 aa11.23□□□□□ -0.61
DNMT3A-201ENST00000264709 STSP08842 583 aa11.23□□□□□ -0.61
DNMT3A-201ENST00000264709 CELP19835 753 aa11.23□□□□□ -0.61
DNMT3A-201ENST00000264709 PAN2Q504Q3 1202 aaKnown RBP11.23□□□□□ -0.61
DNMT3A-201ENST00000264709 RAB12Q6IQ22 244 aa11.23□□□□□ -0.61
DNMT3A-201ENST00000264709 SLC44A3Q8N4M1 653 aa11.23□□□□□ -0.61
DNMT3A-201ENST00000264709 ATAD1Q8NBU5 361 aa11.23□□□□□ -0.61
DNMT3A-201ENST00000264709 FUBP1Q96AE4 644 aaKnown RBP11.23□□□□□ -0.61
DNMT3A-201ENST00000264709 CST11Q9H112 138 aa11.23□□□□□ -0.61
DNMT3A-201ENST00000264709 SLC27A5Q9Y2P5 690 aa11.23□□□□□ -0.61
DNMT3A-201ENST00000264709 DOCK9Q9BZ29 2069 aa11.23□□□□□ -0.61
DNMT3A-201ENST00000264709 SLC22A31A6NKX4 558 aa11.23□□□□□ -0.61
DNMT3A-201ENST00000264709 FGF19O95750 216 aa11.23□□□□□ -0.61
DNMT3A-201ENST00000264709 BRCC3P46736 316 aa11.23□□□□□ -0.61
DNMT3A-201ENST00000264709 MPP7Q5T2T1 576 aa11.23□□□□□ -0.61
DNMT3A-201ENST00000264709 PM20D1Q6GTS8 502 aa11.23□□□□□ -0.61
DNMT3A-201ENST00000264709 RGL4Q8IZJ4 473 aa11.23□□□□□ -0.61
DNMT3A-201ENST00000264709 UBE2J2Q8N2K1 259 aa11.23□□□□□ -0.61
DNMT3A-201ENST00000264709 PKP4Q99569 1192 aa11.23□□□□□ -0.61
DNMT3A-201ENST00000264709 BHLHE41Q9C0J9 482 aaPredicted RBP11.23□□□□□ -0.61
DNMT3A-201ENST00000264709 IL37Q9NZH6 218 aa11.23□□□□□ -0.61
DNMT3A-201ENST00000264709 SLC2A6Q9UGQ3 507 aa11.23□□□□□ -0.61
DNMT3A-201ENST00000264709 ENPP4Q9Y6X5 453 aa11.23□□□□□ -0.61
DNMT3A-201ENST00000264709 SLC22A5O76082 557 aa11.23□□□□□ -0.61
DNMT3A-201ENST00000264709 PPP2R2BQ00005 443 aa11.23□□□□□ -0.61
DNMT3A-201ENST00000264709 GANABQ14697 944 aaKnown RBP11.23□□□□□ -0.61
DNMT3A-201ENST00000264709 USP51Q70EK9 711 aa11.23□□□□□ -0.61
DNMT3A-201ENST00000264709 OR2T11Q8NH01 316 aa11.23□□□□□ -0.61
DNMT3A-201ENST00000264709 TMEM203Q969S6 136 aa11.23□□□□□ -0.61
DNMT3A-201ENST00000264709 BPIFA1Q9NP55 256 aa11.23□□□□□ -0.61
DNMT3A-201ENST00000264709 PCDHB14Q9Y5E9 798 aa11.23□□□□□ -0.61
DNMT3A-201ENST00000264709 GMFGO60234 142 aa11.23□□□□□ -0.61
DNMT3A-201ENST00000264709 SLC25A12O75746 678 aa11.23□□□□□ -0.61
DNMT3A-201ENST00000264709 ALPPP05187 535 aa11.23□□□□□ -0.61
DNMT3A-201ENST00000264709 SLC35G4P0C7Q5 338 aa11.23□□□□□ -0.61
DNMT3A-201ENST00000264709 IDUAP35475 653 aa11.23□□□□□ -0.61
DNMT3A-201ENST00000264709 EN1Q05925 392 aaPredicted RBP11.23□□□□□ -0.61
DNMT3A-201ENST00000264709 ATAT1Q5SQI0 421 aa11.23□□□□□ -0.61
DNMT3A-201ENST00000264709 C22orf42Q6IC83 251 aa11.23□□□□□ -0.61
DNMT3A-201ENST00000264709 FRRS1Q6ZNA5 592 aa11.23□□□□□ -0.61
DNMT3A-201ENST00000264709 KIAA1958Q8N8K9 716 aa11.23□□□□□ -0.61
DNMT3A-201ENST00000264709 HSPA12BQ96MM6 686 aa11.23□□□□□ -0.61
DNMT3A-201ENST00000264709 C20orf27Q9GZN8 174 aa11.23□□□□□ -0.61
DNMT3A-201ENST00000264709 RLN2P04090 185 aa11.23□□□□□ -0.61
DNMT3A-201ENST00000264709 ZNF30P17039 623 aa11.23□□□□□ -0.61
DNMT3A-201ENST00000264709 LMO2P25791 158 aa11.23□□□□□ -0.61
DNMT3A-201ENST00000264709 ATXN1P54253 815 aaKnown RBP11.23□□□□□ -0.61
DNMT3A-201ENST00000264709 DLX5P56178 289 aa11.23□□□□□ -0.61
DNMT3A-201ENST00000264709 ZNF670-ZNF695F2Z2N8 137 aa11.23□□□□□ -0.61
DNMT3A-201ENST00000264709 POLR1CO15160 346 aaPredicted RBP11.23□□□□□ -0.61
DNMT3A-201ENST00000264709 POMCP01189 267 aa11.23□□□□□ -0.61
DNMT3A-201ENST00000264709 PIPP12273 146 aaPredicted RBP11.23□□□□□ -0.61
DNMT3A-201ENST00000264709 GABRB3P28472 473 aa11.23□□□□□ -0.61
DNMT3A-201ENST00000264709 CBX5P45973 191 aa11.23□□□□□ -0.61
DNMT3A-201ENST00000264709 OCLNQ16625 522 aa11.23□□□□□ -0.61
DNMT3A-201ENST00000264709 PIWIL3Q7Z3Z3 882 aaKnown RBP11.23□□□□□ -0.61
DNMT3A-201ENST00000264709 TCTE3Q8IZS6 198 aa11.23□□□□□ -0.61
DNMT3A-201ENST00000264709 ACBD7Q8N6N7 88 aa11.23□□□□□ -0.61
DNMT3A-201ENST00000264709 GALNT11Q8NCW6 608 aa11.23□□□□□ -0.61
DNMT3A-201ENST00000264709 SUN3Q8TAQ9 357 aa11.23□□□□□ -0.61
DNMT3A-201ENST00000264709 SHKBP1Q8TBC3 707 aa11.23□□□□□ -0.61
DNMT3A-201ENST00000264709 SETD7Q8WTS6 366 aaKnown RBP11.23□□□□□ -0.61
DNMT3A-201ENST00000264709 C12orf10Q9HB07 376 aa11.23□□□□□ -0.61
DNMT3A-201ENST00000264709 METTL15A6NJ78 407 aa11.23□□□□□ -0.61
DNMT3A-201ENST00000264709 EEF1E1O43324 174 aaKnown RBP11.23□□□□□ -0.61
DNMT3A-201ENST00000264709 GATBO75879 557 aaKnown RBP11.23□□□□□ -0.61
DNMT3A-201ENST00000264709 RHEBQ15382 184 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms